CN181835
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSA6_DROME (Proteasome subunit alpha type-6 OS=Drosophila melanogaster GN=Prosalpha1 PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.470e-17 Identity = 55/172 (31.98%), Postives = 91/172 (52.91%), Query Frame = 3 Query: 171 YDTDVTTWSPAGRLFQVEYAMEAVKQGS-AAIGLRSKTHVVLGCVNKANSE--LSSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLD-EKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 +D +T +SP GRL+QVEYA +A+ Q + + L+S V+ K + + +F++ IG A+ G AD R + R E N+ Y Y +PV L ++AD QV TQ + RP G +++ D E G +Y P+G + ++A ++G+++ A +YLE Sbjct: 9 FDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRITKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLE 180
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSA6_YEAST (Proteasome component C7-alpha OS=Saccharomyces cerevisiae GN=SCL1 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.275e-17 Identity = 57/172 (33.14%), Postives = 89/172 (51.74%), Query Frame = 3 Query: 171 YDTDVTTWSPAGRLFQVEYAMEAVKQGSA-AIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEK-GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 YD +T +SP GRL+QVEYA +A Q + ++ +R K V+ K +L + IF + IG+ + G D R + ++E + Y Y +P L ++A+ +Q+ TQR++ RP GV L +DE+ G +Y P+G Y Y+A A G + Q T LE Sbjct: 12 YDRHITIFSPEGRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLDPTTVSYIFCISRTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYTQRAYMRPLGVILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLE 183
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSA1_TRYBB (Proteasome subunit alpha type-1 OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.389e-14 Identity = 59/182 (32.42%), Postives = 88/182 (48.35%), Query Frame = 3 Query: 156 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQ-GSAAIGLRSKTHVVLGCVNKANSELSSHQK--KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGL---DEKGA---HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 M R +D +T +SP G L+QVEYA +AV G + +R K V++ + +L + ++ V+D+ GV I G DG+ L + R+E Y Y Y P+ V L D AQV TQ++ R G + G+ DE GA +Y P+G A A+G + A +LE Sbjct: 1 MSRAGFDKYITVFSPEGSLYQVEYAFKAVTYAGLLTVAIRCKDAVLVFTQHSVPDKLMRPETITSLYNVNDNTGVCITGRAPDGKALVQKARNEASEYKYRYGMPMLVSVLAKPWQDMAQVRTQQAGMRLMGTIMTFVGMEQNDEDGAWIPQIYCVDPAGG-AAVHACAVGKKQIEACAFLE 181
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSA6_CAEEL (Proteasome subunit alpha type-6 OS=Caenorhabditis elegans GN=pas-1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.056e-11 Identity = 43/172 (25.00%), Postives = 82/172 (47.67%), Query Frame = 3 Query: 171 YDTDVTTWSPAGRLFQVEYAMEAVKQGS-AAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLL-VAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 +D +T +SP GR++QVEYA +A+ + A+ ++ V+ + L + ++++ +G G+ D + + + E ++ Y +P L ++AD Q TQ + R G LL ++ DEKG +Y P+G Y + ++G + A ++LE Sbjct: 9 FDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVTSVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLE 180 The following BLAST results are available for this feature:
BLAST of CN181835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181835 ID=CN181835; Name=CN181835; organism=Citrus sinensis; type=EST; length=675bpback to top |