CN181835
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSMA_PYRFU (Proteasome subunit alpha OS=Pyrococcus furiosus GN=psmA PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.730e-29 Identity = 73/170 (42.94%), Postives = 98/170 (57.65%), Query Frame = 3 Query: 171 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 YD +T +SP GRLFQV YA EAVK+G+ A+G++ VVL + S L +KIF++DDHI A +G+ AD RVL R E Y TY P PV +V ++ D Q+ TQ RP+G LL+AG++++ LY PSG YF ++A AIGS A E Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCGEGVVLAVEKRITSRLIEPDSYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHTQYGGVRPFGAALLMAGINDR-PELYETDPSGAYFAWKAVAIGSGRNTAMAIFE 178
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSA7_HUMAN (Proteasome subunit alpha type-7 OS=Homo sapiens GN=PSMA7 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.730e-29 Identity = 70/171 (40.94%), Postives = 104/171 (60.82%), Query Frame = 3 Query: 171 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 YD +T +SP G LFQVEYA EAVK+GS A+G+R + VVLG K+ ++L + +KI +DD++ +A AGLTAD R++ R EC ++ T E P+ V + +A Q TQ + +RP+G+ L+ G D G LY PSG Y ++A AIG +++ + +LE Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLE 173
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSMA_METB6 (Proteasome subunit alpha OS=Methanoregula boonei (strain 6A8) GN=psmA PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.871e-29 Identity = 73/170 (42.94%), Postives = 99/170 (58.24%), Query Frame = 3 Query: 171 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 YD +T +SP GRL+QVEYA EAVK+G+ A+G+++ VVL + +S+L SS +KIFK+D+HIGVA +GL D R L R EC +Y+ + V L +L D Q TQ RPYG LL+AG+ + + L+ PSG EY+A IG AA E Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKAHDGVVLIVDKRVSSKLLESSSIEKIFKIDEHIGVASSGLVGDARALVDRARIECQINRVSYDERIEVEALAKKLCDHMQTLTQYGGIRPYGTALLIAGVSDGESRLFETDPSGTLLEYKATGIGIGRPAAMKVFE 178
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSA7B_XENLA (Proteasome subunit alpha type-7-B OS=Xenopus laevis GN=psma7-B PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.871e-29 Identity = 70/171 (40.94%), Postives = 104/171 (60.82%), Query Frame = 3 Query: 171 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 YD +T +SP G LFQVEYA EAVK+GS A+G+R K VVLG K+ ++L + +KI +D+++ +A AGLTAD R++ R EC ++ T E P+ V + +A Q TQ + +RP+G+ L+ G D G LY PSG Y ++A AIG +++ + +LE Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKEIVVLGVEKKSVAKLQDERTVRKICALDENVFMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLE 173
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSA7A_XENLA (Proteasome subunit alpha type-7-A OS=Xenopus laevis GN=psma7-A PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.871e-29 Identity = 70/171 (40.94%), Postives = 104/171 (60.82%), Query Frame = 3 Query: 171 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 YD +T +SP G LFQVEYA EAVK+GS A+G+R K VVLG K+ ++L + +KI +D+++ +A AGLTAD R++ R EC ++ T E P+ V + +A Q TQ + +RP+G+ L+ G D G LY PSG Y ++A AIG +++ + +LE Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKEIVVLGVEKKSVAKLQDERTVRKICALDENVFMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLE 173
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSA4_DICDI (Proteasome subunit alpha type-4 OS=Dictyostelium discoideum GN=psmA4 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.871e-29 Identity = 69/174 (39.66%), Postives = 104/174 (59.77%), Query Frame = 3 Query: 168 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL----SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEK-GAHLYYNCPSGNYFEYQAFAI-GSRSQAAKTYL 671 +YD T +SP GR++QVEYAM A++ A +G+ +K +VL K ++L +S +K+FK+D+H+ A+AG+T+D +L Y R + Y Y+ P+PV +LV Q+ D Q TQ RP+GV L AG D G LY + PSGN+ ++A +I G SQ A++ L Sbjct: 4 RYDQRTTIFSPEGRVYQVEYAMTAIRHAGATVGILAKDGIVLAAEKKTTAKLLDSSTSISEKMFKIDEHVVCAVAGITSDANILINYARLSSQRFFYQYQEPMPVEQLVSQICDTKQGYTQYGGLRPFGVSFLYAGWDRHYGFQLYQSDPSGNFAGWKATSIGGENSQVAQSVL 177
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSMA_METTH (Proteasome subunit alpha OS=Methanobacterium thermoautotrophicum GN=psmA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.362e-29 Identity = 69/170 (40.59%), Postives = 100/170 (58.82%), Query Frame = 3 Query: 171 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 YD +T +SP GRLFQVEYA EAVK+G+ ++G++SK +VL + S+L + +KIF++D+HIG A +GL AD R + R E TY P+ V L ++ D Q+ TQ RP+G L++ G++ +G L+ PSG EY+A AIG+ AA E Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTSLGVKSKEGIVLVVDKRPTSKLVEPKSIEKIFQIDEHIGAATSGLVADARAIIEKARLEAQINRITYNEPIRVESLAKKICDMKQMYTQHGGVRPFGTALIIGGVNGRGCRLFETDPSGALIEYKATAIGAGRPAAMEEFE 178
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAE (Proteasome subunit alpha OS=Pyrobaculum aerophilum GN=psmA PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.309e-29 Identity = 69/170 (40.59%), Postives = 100/170 (58.82%), Query Frame = 3 Query: 171 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 YD +T +SP G+++QVEYA EAVK+G +G++ K VVL + S L SS +KI+ +D+H+ + +GL AD R+L Y R +++ + Y+ P+ V L + + Q TQ RP+GV LL+AG+D GA LY PSG Y Y A AIG+ S +LE Sbjct: 9 YDRAITIFSPEGKIYQVEYAGEAVKRGWPTVGVKCKAGVVLTAEKRKISALFDSSSLEKIYLIDEHVAASPSGLLADARILIDYARDVALSHRFIYDEPIDVEFLTKAVCNLKQQYTQFGGARPFGVALLIAGVDRHGARLYQTDPSGVYIGYFATAIGAESGTITEFLE 178
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSA7L_HUMAN (Proteasome subunit alpha type-7-like OS=Homo sapiens GN=PSMA8 PE=1 SV=3) HSP 1 Score: 127.102 bits (318), Expect = 8.309e-29 Identity = 72/179 (40.22%), Postives = 106/179 (59.22%), Query Frame = 3 Query: 165 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIA------GLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKG-AHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 ++YD +T +SP G LFQVEYA EAVK+GS A+G+R VVLG K+ ++L + +KI +DDH+ +A A GLTAD RV+ R EC ++ T E P+ V + +A Q TQ + +RP+G+ L+ G D+ G + LY PSG Y ++A AIG ++ + +LE Sbjct: 3 SRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAVLTIFIGLTADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGISRLYQTDPSGTYHAWKANAIGRSAKTVREFLE 181
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSA3_ORYSJ (Proteasome subunit alpha type-3 OS=Oryza sativa subsp. japonica GN=PAG1 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.309e-29 Identity = 68/170 (40.00%), Postives = 95/170 (55.88%), Query Frame = 3 Query: 171 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSE--LSSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 YD VTT+SP GR+FQVEYA +AV +G++ K +VLG S+ L ++I V H G+A+AGL ADGR + +SE +Y Y P+ V L ++A +CT W RP+G G+++ G D G LY PSG ++Y A+G QAAKT +E Sbjct: 8 YDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSNRRIHSVHWHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIE 177 The following BLAST results are available for this feature:
BLAST of CN181835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181835 ID=CN181835; Name=CN181835; organism=Citrus sinensis; type=EST; length=675bpback to top |