CN181835
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSA5_DICDI (Proteasome subunit alpha type-5 OS=Dictyostelium discoideum GN=psmA5 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.417e-28 Identity = 72/179 (40.22%), Postives = 107/179 (59.78%), Query Frame = 3 Query: 162 RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA------QVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 R++YD V T+SP GRLFQVEYA+EA+K G IG++ + VVL + S L S +K+ ++D H+ A++GL AD R + + R E N+ + Y P+ V V + D A + + RP+GV LL+AG+DEKG LYY+ PSG + ++ A AIG+ S+ A+T L+ Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYALEAIKLG---IGVQCEEGVVLAVEKRLTSPLLEPSSIQKVVEIDYHLICALSGLVADARTIIDHARIETQNHRFNYNEPMGVESCVQSICDLALRFGENRNSGEERMSRPFGVALLIAGIDEKGPSLYYSDPSGTFTQFHAKAIGAGSEGAQTTLQ 180
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSA5_CAEEL (Proteasome subunit alpha type-5 OS=Caenorhabditis elegans GN=pas-5 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.417e-28 Identity = 72/177 (40.68%), Postives = 108/177 (61.02%), Query Frame = 3 Query: 162 RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA----QVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 R++YD V T+SP GRLFQVEYA+EAVK GS +IG+++ V+L ++ S+L + +KI KVD HIGV AGL AD R L + E N+ +TY + V + +A+ A + S RP+GV +L AG+D++GA L++ PSG + + +A +IG+ S A+ L+ Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAIEKISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDDDVKASMSRPFGVAMLFAGVDQEGAKLFHLDPSGTFIDCKAKSIGAASDGAEQNLK 181
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSMA_SULAC (Proteasome subunit alpha OS=Sulfolobus acidocaldarius GN=psmA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.851e-28 Identity = 68/171 (39.77%), Postives = 99/171 (57.89%), Query Frame = 3 Query: 171 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDE-KGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 YD +T +SP G L+QV+YA EAVK+G +G+++K+ VVL + ++L +KIF +DDH+G AGL +DGR+L Y RS+ + + Y+ P+ + L ++D Q TQ RP+GV L+V G+D+ K L PSG + Y A AIG A YLE Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKRGWTTLGVKTKSGVVLLAEKRKATQLLDVDGIEKIFMLDDHVGCTFAGLASDGRILIDYARSQALQHRLIYDEPISIEYLTKVISDVKQAYTQHGGVRPFGVALIVGGIDKGKQPKLLMTEPSGQFMPYYAVAIGQGGYTATEYLE 180
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSMA_ARCFU (Proteasome subunit alpha OS=Archaeoglobus fulgidus GN=psmA PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.851e-28 Identity = 75/170 (44.12%), Postives = 98/170 (57.65%), Query Frame = 3 Query: 171 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 YD +T +SP GRLFQVEYA EAVK+G+ AIG++ K V+L + S+L +KI+K+D+HI A +GL AD RVL R E TY+ P+ V L ++ D Q TQ RP+GV LL+AG+DE LY PSG EY+A AIG A + E Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKRGATAIGIKCKEGVILIADKRVGSKLLEADTIEKIYKIDEHICAATSGLVADARVLIDRARIEAQINRLTYDEPITVKELAKKICDFKQQYTQYGGVRPFGVSLLIAGVDEV-PKLYETDPSGALLEYKATAIGMGRNAVTEFFE 176
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSA7_CHICK (Proteasome subunit alpha type-7 OS=Gallus gallus GN=PSMA7 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.417e-28 Identity = 70/171 (40.94%), Postives = 101/171 (59.06%), Query Frame = 3 Query: 171 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 YD +T +SP G LFQVEYA EAVK+GS A+G+R K VVLG K+ ++L + +KI +DD++ +A AGLTAD R++ R EC ++ T E P+ V + +A Q TQ +RP+G+ L+ G D G LY PSG Y ++A AIG +++ + E Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSKRRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVRVEFE 173
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSMA2_HALMA (Proteasome subunit alpha 2 OS=Haloarcula marismortui GN=psmA2 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.157e-28 Identity = 70/170 (41.18%), Postives = 99/170 (58.24%), Query Frame = 3 Query: 171 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 YD +T +SP GRL+QVEYA EAVK+G+A++G+R++ VV+ A S L +KI ++D H+GVA AG AD R L R + Y+ P V L ++ D Q TQ RP+GV LLVAG+++ L+ PSG +E+QA AIG + +T+LE Sbjct: 9 YDRGITIFSPDGRLYQVEYAREAVKRGTASVGVRTEDGVVIAADRHARSPLIERDSIEKIHEIDSHVGVASAGHVADARQLIDVARRQSQVNRLRYDEPASVESLTKEITDYIQQYTQTGGARPFGVALLVAGIEDGEPRLFETDPSGTPYEWQAVAIGGSREDIQTFLE 178
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSA71_DROME (Proteasome subunit alpha type-7-1 OS=Drosophila melanogaster GN=Pros28.1 PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 3.157e-28 Identity = 67/173 (38.73%), Postives = 104/173 (60.12%), Query Frame = 3 Query: 165 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQK--KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKG-AHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 ++YD VT +SP G L QVEYA EAV++GS A+G+R VVLG K+ ++L +K KI +D+H+ +A AGLTAD R++ + EC ++ E P+ + + +A Q TQ + +RP+G+ L+ G D G AHL+ PSG ++EY+A A G ++ + + E Sbjct: 3 SRYDRAVTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKKSVAQLQEDRKVRKICMLDNHVVMAFAGLTADARIMINRAQVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGRRPFGISCLIGGFDADGSAHLFQTEPSGIFYEYKANATGRSAKVVREFFE 175
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSMA_THEVO (Proteasome subunit alpha OS=Thermoplasma volcanium GN=psmA PE=3 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 4.124e-28 Identity = 73/170 (42.94%), Postives = 99/170 (58.24%), Query Frame = 3 Query: 171 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 YD +T +SP GRLFQVEYA EAVK+GS A+GL+ V+L K S+L +KI +DD++ +GL AD RVL + R TY S + + LV ++AD+ Q TQ RPYGV L+ AG+D+ G L+ P+G EY+A AIGS A ++LE Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGLKFSNGVLLISDKKIRSKLIEQNSLEKIQLIDDYVAAVTSGLVADARVLIDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLE 177
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSMA_NATPD (Proteasome subunit alpha OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=psmA PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.124e-28 Identity = 70/170 (41.18%), Postives = 98/170 (57.65%), Query Frame = 3 Query: 171 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 YD +T +SP GRL+QVEYA EAVK+G+A+IG+R++ VVL + S L +KI K DDHIG+A AG AD R L + R + Y+ P+ V L + D Q TQ RP+GV L++ G+++ LY PSG +E+QA A+G+ + YLE Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGIRTEDGVVLVVDKRIRSPLMERTSVEKIHKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYDEPIGVETLTKAVTDHIQQYTQVGGARPFGVALIIGGIEDGEPRLYETDPSGTPYEWQALAVGADRGDIQEYLE 179
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSMA_METS3 (Proteasome subunit alpha OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=psmA PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.124e-28 Identity = 71/170 (41.76%), Postives = 96/170 (56.47%), Query Frame = 3 Query: 171 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 YD +T +SP GRLFQVEYA EAVK+G+ +IG++ +VL + S L ++ +KIFK+D+HIG A +GL AD R L R E TY P+ V L +L D Q+ TQ RP+G L++ G+ + L+ PSG EY+A AIGS AA E Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTSIGIKCSEGIVLAVDKRTTSNLVEATSIEKIFKIDEHIGAATSGLVADARALVERARVEAQINKITYSEPIRVDSLSKKLCDMLQMYTQNGGVRPFGSALIIGGVYDGICKLFETDPSGALIEYKATAIGSGRSAAMDIFE 178 The following BLAST results are available for this feature:
BLAST of CN181835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181835 ID=CN181835; Name=CN181835; organism=Citrus sinensis; type=EST; length=675bpback to top |