CN181835
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSA2_CARAU (Proteasome subunit alpha type-2 OS=Carassius auratus GN=psma2 PE=2 SV=3) HSP 1 Score: 123.635 bits (309), Expect = 9.186e-28 Identity = 68/170 (40.00%), Postives = 98/170 (57.65%), Query Frame = 3 Query: 171 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQK--KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 Y +TT+SP+G+L Q+EYA+ AV G+ ++G+++ VVL K S L Q KI + HIG+ +G+ D RVL R R Y Y+ P+P G+LV ++A Q TQ RP+GV LL+AG DE +L+ + PSG YF ++A A+G KT+LE Sbjct: 6 YSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKASNGVVLATEKKQKSILYDEQSVHKIEPITKHIGMVYSGMGPDYRVLVRRARKLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEDRPYLFQSDPSGAYFAWKATAMGKSYVNGKTFLE 175
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSMA_METTE (Proteasome subunit alpha OS=Methanosarcina thermophila GN=psmA PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.200e-27 Identity = 71/170 (41.76%), Postives = 97/170 (57.06%), Query Frame = 3 Query: 171 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 YD +T +SP GRLFQVEYA EAVK+G+ A+G+++ VVL + S L + +KIF++DDHIG A +GL AD R L R E +Y+ + V + ++ D Q TQ RPYG LL+AG+D+K L+ PSG EY+A AIG+ A E Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARALVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDKRPRLFETDPSGALLEYKATAIGAGRNAVVEVFE 176
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSA2B_ARATH (Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.200e-27 Identity = 69/172 (40.12%), Postives = 101/172 (58.72%), Query Frame = 3 Query: 165 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 +QY +TT+SP+G+L Q+E+A+ AV G ++G+++ VV+ K S L + +KI + +IG +G+ D RVL R R + Y Y+ P+PV +LV + A Q TQ RP+GV LLVAG D+KG LY PSG+YF ++A A+G AKT+LE Sbjct: 4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLE 175
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSMA_SULTO (Proteasome subunit alpha OS=Sulfolobus tokodaii GN=psmA PE=3 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 1.567e-27 Identity = 68/171 (39.77%), Postives = 98/171 (57.31%), Query Frame = 3 Query: 171 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVL-GCVNKANSELSSHQ-KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDE-KGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 YD +T +SP G L+QV+YA EAVK+G +G+++K VVL G KA L +K+F +DDH+G + AGL +DGR+L Y RS+ + + Y+ P+ + L ++D Q+ TQ RP+GV L++ G+D K L PSG + Y A AIG A Y E Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTTLGVKTKAGVVLIGEKRKATQLLDVDSIEKVFILDDHVGCSFAGLASDGRILIDYARSQALQHRLIYDEPINIDYLTKLVSDVKQMYTQHGGVRPFGVALIIGGIDRGKTPKLLMTEPSGQFMPYYAVAIGQGGYTATEYFE 180
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSMA_METVS (Proteasome subunit alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=psmA PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.567e-27 Identity = 71/170 (41.76%), Postives = 96/170 (56.47%), Query Frame = 3 Query: 171 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELS--SHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 YD +T +SP GRL+QVEYA EAV++G+ A+G++ K VVL + S+L S +KIF++DDHI A +GL AD RVL R E +Y + V L ++ D Q T RP+G+ LL+ G+D A L+ PSG EY+A AIGS A LE Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARVEAQVNRISYGEAITVEALAKKICDIKQAYTHHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPVAMEILE 179
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSMA_METM6 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=psmA PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.567e-27 Identity = 71/170 (41.76%), Postives = 96/170 (56.47%), Query Frame = 3 Query: 171 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELS--SHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 YD +T +SP GRL+QVEYA EAV++G+ A+G++ VVL + S+L S +KIF++DDHI A +GL AD RVL R E +Y + V L ++ D Q TQ RP+G+ LL+ G+D A L+ PSG EY+A AIGS A LE Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCNDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLE 179
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSMA_METAC (Proteasome subunit alpha OS=Methanosarcina acetivorans GN=psmA PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.567e-27 Identity = 70/170 (41.18%), Postives = 97/170 (57.06%), Query Frame = 3 Query: 171 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 YD +T +SP GRLFQVEYA EAVK+G+ A+G+++ VVL + S L + +KIF++D+HIG A +GL AD R L R E +Y+ P+ V + ++ D Q TQ RPYG LL+AG+D+ L+ PSG EY+A AIG+ A E Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDNKPRLFETDPSGALLEYKATAIGAGRNAVVEVFE 176
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSA7A_ORYSJ (Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. japonica GN=Os08g0548900 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.047e-27 Identity = 73/174 (41.95%), Postives = 101/174 (58.05%), Query Frame = 3 Query: 168 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLD---EKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 +YD +T +SP G LFQVEYA+EAV++G+AA+G+R VVLG K+ +L S +KI +D HI +A AGL AD RVL R EC ++ T E P+ V + +A Q TQ RP+G+ L+ G D EK A LY PSG + ++A A G S + + +LE Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTEKPA-LYQTDPSGTFSAWKANATGRNSNSMREFLE 175
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSA7A_ORYSI (Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. indica GN=OsI_029135 PE=2 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.047e-27 Identity = 73/174 (41.95%), Postives = 101/174 (58.05%), Query Frame = 3 Query: 168 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLD---EKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 +YD +T +SP G LFQVEYA+EAV++G+AA+G+R VVLG K+ +L S +KI +D HI +A AGL AD RVL R EC ++ T E P+ V + +A Q TQ RP+G+ L+ G D EK A LY PSG + ++A A G S + + +LE Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTEKPA-LYQTDPSGTFSAWKANATGRNSNSMREFLE 175
BLAST of CN181835 vs. ExPASy Swiss-Prot
Match: PSA73_DROME (Proteasome subunit alpha type-7-1B OS=Drosophila melanogaster GN=Pros28.1B PE=2 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.047e-27 Identity = 65/172 (37.79%), Postives = 100/172 (58.14%), Query Frame = 3 Query: 168 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 674 +YD VT +SP G L QVEYA EAV++GS +GLR+ +V+G ++ +L + +KI +DDH+ + +GLTAD R+L + E ++ +E P V + +A Q TQ + +RP+G+ LV G DE G HL+ PSG ++E++A G SQ + Y+E Sbjct: 4 RYDRAVTIYSPDGHLLQVEYAQEAVRRGSTVMGLRTNNAIVIGVEKRSVGDLQEERMVRKICMLDDHVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSCLVGGFDEDGTPHLFQTDPSGIFYEWRANTTGRSSQPVRDYME 175 The following BLAST results are available for this feature:
BLAST of CN181835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181835 ID=CN181835; Name=CN181835; organism=Citrus sinensis; type=EST; length=675bpback to top |