CN181834
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181834 vs. ExPASy Swiss-Prot
Match: PSA1_PONAB (Proteasome subunit alpha type-1 OS=Pongo abelii GN=PSMA1 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.316e-17 Identity = 43/105 (40.95%), Postives = 63/105 (60.00%), Query Frame = -2 Query: 365 LVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGE-TLKSSICTVAVVGAGEPFHILDQETVQKLIDSFE 676 L+AG D+ G H++ CPS NYF+ +A +IG+RSQ+A+TYLER F E +L+K L A+RETL E L + ++ +VG F I D + V ++ E Sbjct: 133 LIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIHDDDDVSPFLEGLE 237
BLAST of CN181834 vs. ExPASy Swiss-Prot
Match: PSA1_TRYBR (Proteasome subunit alpha type-1 OS=Trypanosoma brucei rhodesiense PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.636e-17 Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = -2 Query: 365 LVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAI-RETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFE 676 L+AG D +G LY PSG+ F+++A A+G RSQAA+TYLER F F ++L+ AL A+ T G L T+A+VG G PF IL +E +K +D F+ Sbjct: 134 LIAGYDRQGPRLYQTVPSGDVFDFKATAMGLRSQAARTYLERHFRGFPACDLDELVMHALRALGAATSGGVELNIKNTTIAIVGKGTPFTILTEEEARKYLDGFK 238
BLAST of CN181834 vs. ExPASy Swiss-Prot
Match: PSA1_CHICK (Proteasome subunit alpha type-1 OS=Gallus gallus GN=PSMA1 PE=2 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.640e-16 Identity = 41/105 (39.05%), Postives = 63/105 (60.00%), Query Frame = -2 Query: 365 LVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGE-TLKSSICTVAVVGAGEPFHILDQETVQKLIDSFE 676 L+AG D+ G H++ CPS NYF+ +A +IG+RSQ+A+ YLER F++ +L+K L A+RETL E L + ++ +VG F I D + V ++ E Sbjct: 132 LIAGYDDMGPHIFQTCPSANYFDCKAMSIGARSQSARNYLERHMTEFTDCNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDMEFTIYDDDDVAPFLEGLE 236
BLAST of CN181834 vs. ExPASy Swiss-Prot
Match: PSA1_SCHPO (Probable proteasome subunit alpha type-1 OS=Schizosaccharomyces pombe GN=SPAC6G10.04c PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.890e-15 Identity = 42/102 (41.18%), Postives = 64/102 (62.75%), Query Frame = -2 Query: 374 LVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETL-QGETLKSSICTVAVVGAGEPFHILDQETVQKLID 676 LV G DE G HL PSG EY ++GSRSQ+A+TY+ER + F +S+RE+LI AL A+R+TL + + L +++V+G E + + DQ ++ +D Sbjct: 133 LVIGYDESGPHLLEFQPSGLVLEYLGTSMGSRSQSARTYIERNLDTFPDSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQNDTKEWLD 234
BLAST of CN181834 vs. ExPASy Swiss-Prot
Match: PSA1_DROME (Proteasome subunit alpha type-1 OS=Drosophila melanogaster GN=Pros35 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.890e-15 Identity = 43/102 (42.16%), Postives = 63/102 (61.76%), Query Frame = -2 Query: 383 LVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETL----QGETLKSSICTVAVVGAGEPFHILDQETVQK 676 LVAG DE+G H+Y PS +F +A +IGSRSQ+A+TYLE+ F +S+++++I+ + AI TL QG+ TVA+VG +PF IL + K Sbjct: 133 LVAGYDERGPHIYQVTPSATFFNCKANSIGSRSQSARTYLEKNLNKFLDSSKDEIIRHGIRAILGTLPTDEQGKDAGQYDITVAIVGKDQPFTILSNKDSAK 234
BLAST of CN181834 vs. ExPASy Swiss-Prot
Match: PSA1_CAEEL (Proteasome subunit alpha type-1 OS=Caenorhabditis elegans GN=pas-6 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.535e-14 Identity = 41/97 (42.27%), Postives = 59/97 (60.82%), Query Frame = -2 Query: 389 LVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQG-ETLKSSICTVAVVGAGEPFHILDQETV 676 L+AG D+ GAH+ PS +IG+RSQ+A+TYLER +NF +ST E LI AL+A+R+TL E L + ++ +VG PF +L+ V Sbjct: 133 LIAGYDKDGAHIIQTDPSAEVVSMHGTSIGARSQSARTYLERNVDNFEKSTPEQLIVHALLALRDTLPAEENLNAQNTSIGIVGKDSPFSLLEDAQV 229
BLAST of CN181834 vs. ExPASy Swiss-Prot
Match: PSA1_YEAST (Proteasome component PRE5 OS=Saccharomyces cerevisiae GN=PRE5 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.466e-14 Identity = 45/102 (44.12%), Postives = 60/102 (58.82%), Query Frame = -2 Query: 377 LVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENF--SESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 676 L+ G D+ GAHL PSGN E AIG+RSQ AKTYLER + F + ++LIK + AI ++L+ E+L ++A+VG PF I D E V K I Sbjct: 133 LIIGYDKSGAHLLEFQPSGNVTELYGTAIGARSQGAKTYLERTLDTFIKIDGNPDELIKAGVEAISQSLRDESLTVDNLSIAIVGKDTPFTIYDGEAVAKYI 234
BLAST of CN181834 vs. ExPASy Swiss-Prot
Match: PSA2_SCHPO (Probable proteasome subunit alpha type-2 OS=Schizosaccharomyces pombe GN=SPCC1442.06 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.201e-12 Identity = 39/82 (47.56%), Postives = 56/82 (68.29%), Query Frame = -2 Query: 431 LVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVV 676 LVAG+DEKG LY PSG YF ++A AIG S AAKT+LE+R+ + E +D + A++A++ET +GE + +I +AVV Sbjct: 135 LVAGMDEKGPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRYND--ELELDDAVHTAILALKETFEGELTEDNI-EIAVV 213
BLAST of CN181834 vs. ExPASy Swiss-Prot
Match: PSA2_DICDI (Proteasome subunit alpha type-2 OS=Dictyostelium discoideum GN=psmA2 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.709e-11 Identity = 38/91 (41.76%), Postives = 59/91 (64.84%), Query Frame = -2 Query: 404 LVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHIL 676 LVAG DEKG HLY PSG+YF ++A AIG ++KT+LE+R+ + E ED I+ AL+ I+E + + + ++ +A++G + F IL Sbjct: 133 LVAGFDEKGPHLYQVDPSGSYFAWKATAIGKNMVSSKTFLEKRYSDDLEI--EDAIQTALITIKEGFETQLTEFNM-ELAIIGKNQEFKIL 220 The following BLAST results are available for this feature:
BLAST of CN181834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181834 ID=CN181834; Name=CN181834; organism=Citrus sinensis; type=EST; length=677bpback to top |