CN181812

Overview
NameCN181812
Unique NameCN181812
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1894 contig Csv1_Contig1894:149..816. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.882e-50
Identity = 108/223 (48.43%), Postives = 137/223 (61.43%), Query Frame = 3
Query:    6 KIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGN--PERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            +IV   V K   + P + AS LR+HFHDCFV+GCDAS+LL+S+G    E+ + PN+  +   F+ IE +K  +E  CP  VSCADIL L  RDS V TGGPSW+VP GRRD R +  S + N+IPAP N F  +   F  QGLDL DLV LSG+HTIG S CTS   RLYN +G G  D  L S+Y A L  ++C     + TL  +D  +   FD  Y+  L
Sbjct:   47 EIVQSIVAKAFEHDPRMPASLLRLHFHDCFVKGCDASILLDSSGTIISEKRSNPNRN-SARGFELIEEIKHALEQECPETVSCADILALAARDSTVITGGPSWEVPLGRRDARGASLSGSNNDIPAPNNTFQTILTKFKRQGLDLVDLVSLSGSHTIGNSRCTSFRQRLYNQSGNGKPDMTL-SQYYATLLRQRCPRSGGDQTLFFLDFATPFKFDNHYFKNL 267          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.916e-50
Identity = 105/219 (47.95%), Postives = 134/219 (61.19%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNST-GNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTL-LEMDPGSRKTFDLSYY 659
            IV D V K       +A   +RMHFHDCFVRGCD SVL++ST  N      P    +   F+ I+  K  +E  C G+VSCADI+    RDS+  TGG  + VP GRRDGR+S+ SEA  N+P PT     L + F+N+GL   ++V LSGAHTIG SHC+S S+RLYNF G   QDP LD +YAA+LK  +C   + NT L + M+P S    D+ YY
Sbjct:   76 IVKDEVRKGFIRDSGVAPGLVRMHFHDCFVRGCDGSVLIDSTPSNTAEKDSPANNPSLRGFEVIDSAKARLEAVCKGVVSCADIVAFAARDSVEITGGLGYDVPAGRRDGRISLASEASTNLPPPTFTVDQLTQFFSNKGLTQDEMVTLSGAHTIGRSHCSSFSNRLYNFNGTSGQDPTLDPQYAASLKT-QCPQGSTNTNLVVPMNPSSPSITDVGYY 293          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 8.385e-50
Identity = 102/220 (46.36%), Postives = 140/220 (63.64%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            IV   V  H  + P++A   LRMHFHDCFV GCD S+L+  + + ER A+PN+ L G  FD IE  K  +E  CPG+VSCADIL L  RDS+VAT G +W VPTGRRDGRVS  ++A  ++PA  ++  + +R F  +GL+ +DLV L+GAHTIG + C  +  RL+NF   G  DP++D+ +   L+A  C    D +  + +D GS   FD SY++ L
Sbjct:   47 IVQSTVRAHFQSDPTVAPGILRMHFHDCFVLGCDGSILIEGS-DAERTAIPNRNLKG--FDVIEDAKTQIEAICPGVVSCADILALAARDSVVATRGLTWSVPTGRRDGRVSRAADA-GDLPAFFDSVDIQKRKFLTKGLNTQDLVALTGAHTIGTAGCAVIRDRLFNFNSTGGPDPSIDATFLPQLRA-LCPQNGDASRRVGLDTGSVNNFDTSYFSNL 261          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.095e-49
Identity = 104/220 (47.27%), Postives = 140/220 (63.64%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            IV + VN    + P +A   LRMHFHDCFV+GCD S+L+ S  N ER A PN  L G  F+ I+  K  +E ACPG+VSCADIL L  RD+++ T G  W+VPTGRRDGRVS+ S A NN+P P ++  + Q+ F+  GL+ +DLV+L G HTIG + C    +RL+N TG    DP +D  + A L+  +C    D +  +++D GS  T+D SYYN L
Sbjct:   50 IVRNAVNAGFSSDPRIAPGILRMHFHDCFVQGCDGSILI-SGANTERTAGPNLNLQG--FEVIDNAKTQLEAACPGVVSCADILALAARDTVILTQGTGWQVPTGRRDGRVSLASNA-NNLPGPRDSVAVQQQKFSALGLNTRDLVVLVGGHTIGTAGCGVFRNRLFNTTG-QTADPTIDPTFLAQLQT-QCPQNGDGSVRVDLDTGSGSTWDTSYYNNL 263          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.161e-49
Identity = 102/223 (45.74%), Postives = 137/223 (61.43%), Query Frame = 3
Query:    6 KIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGN--PERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            +IV   V K       +AAS +R+HFHDCFV+GCD S+LL+++G+   E+N+ PN   +   F+ ++ +K  +E+ CP  VSCAD LTL  RDS V TGGPSW VP GRRD   + R++   ++P P N F  +   F+N+GL+L DLV LSG+HTIG S CTS   RLYN +G G  D  L+  YAA L+ R C     +  L E+D  S   FD SY+  L
Sbjct:   49 EIVRSVVAKAFERETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPNSR-SARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWTVPLGRRDSATASRAKPNKDLPEPDNLFDTIFLRFSNEGLNLTDLVALSGSHTIGFSRCTSFRQRLYNQSGSGSPDTTLEKSYAAILRQR-CPRSGGDQNLSELDINSAGRFDNSYFKNL 269          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.982e-47
Identity = 95/223 (42.60%), Postives = 136/223 (60.99%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNP---ERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            IV   V + + N   +  S +R+HFHDCFV GCD S+LL++ G     E++A+PN   T   FD ++ +K  VE+ACPG+VSC DIL L +  S+   GGPSW V  GRRD R + +  A  ++P+P  N T L + F N GL++ DLV LSGAHT G + C + S RL+NF+  G+ DP L++ Y A L+ + C       T+  +DP +  TFD +Y++ L
Sbjct:   40 IVRTVVQQALQNDARIGGSLIRLHFHDCFVDGCDGSLLLDNNGTTIVSEKDALPNTNSTRG-FDVVDNIKTAVENACPGVVSCVDILALASESSVSLAGGPSWNVLLGRRDRRTANQGGANTSLPSPFENLTNLTQKFTNVGLNVNDLVALSGAHTFGRAQCRTFSPRLFNFSNTGNPDPTLNTTYLATLQ-QICPQGGSGFTVTNLDPTTPDTFDNNYFSNL 260          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.087e-47
Identity = 105/224 (46.88%), Postives = 140/224 (62.50%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNP---ERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSI-VATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPN---DNTTLLEMDPGSRKTFDLSYY 659
            IV   V K +    SLA   LR+H+HDCFVRGCDAS+LL+S       E+ A PN +L+G  F+ I+ +K ++E  CP  VSCADILTL  RD++      P W V TGR DGRVS+ +EA  ++P+   NFT LQ+ FA   LD+ DLV LSGAHTIG++HC     RL NFTG GD DP+L+  YA+ LK+ +C   +   + + ++ MDP     FD  Y+
Sbjct:   61 IVRQIVWKKVEANRSLAPKLLRVHYHDCFVRGCDASLLLDSVAGKAVSEKEARPNLSLSG--FEIIDEIKYILEKRCPNTVSCADILTLAARDAVSYEFERPLWNVFTGRVDGRVSLATEAARDLPSAGANFTTLQKLFAESDLDVVDLVALSGAHTIGIAHCGVFGRRLLNFTGKGDTDPSLNPSYASFLKS-ECSDKSLRLNPSAVVGMDPTGPLAFDSGYF 281          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER64_ARATH (Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.133e-46
Identity = 99/222 (44.59%), Postives = 139/222 (62.61%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTG--NPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            IV + V K + N  ++ A+ LRMHFHDCFVRGCD SVLL+S G    E++  PN +L    F  I+  K+ +E+ CPGIVSCADIL+L  RD++  +GGP+W VP GR+DGR+S   E +  +PAPT N + L+++F  +GL + DLV LSG HT+G +HC+S  +RL+ F    + DP L+  +AA L+   C   N          G+  +FD  YY +L
Sbjct:   38 IVTNAVKKAMSNDQTVPAALLRMHFHDCFVRGCDGSVLLDSKGKNKAEKDGPPNISL--HAFYVIDNAKKALEEQCPGIVSCADILSLAARDAVALSGGPTWAVPKGRKDGRISKAIETR-QLPAPTFNISQLRQNFGQRGLSMHDLVALSGGHTLGFAHCSSFQNRLHKFNTQKEVDPTLNPSFAARLEG-VCPAHNTVKNAGSNMDGTVTSFDNIYYKML 255          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.133e-46
Identity = 96/220 (43.64%), Postives = 136/220 (61.82%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            IV   V  H  + P+++   LR+HFHDCFV+GCD SVL+    + E+ A+PN  L G   + I+  K  +E  CPG+VSCADIL L  RDS+  + GPSW+VPTGR+DGR+S+ +EA +N+P+P ++  + ++ F ++GLD  DLV L GAHTIG + C     RLYNFT  G+ DP +   +   LK   C    D +  + +D GS   FD S++  L
Sbjct:   44 IVRSTVESHFDSDPTISPGLLRLHFHDCFVQGCDGSVLIKGK-SAEQAALPNLGLRG--LEVIDDAKARLEAVCPGVVSCADILALAARDSVDLSDGPSWRVPTGRKDGRISLATEA-SNLPSPLDSVAVQKQKFQDKGLDTHDLVTLLGAHTIGQTDCLFFRYRLYNFTVTGNSDPTISPSFLTQLKT-LCPPNGDGSKRVALDIGSPSKFDESFFKNL 258          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER62_ARATH (Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.933e-46
Identity = 101/218 (46.33%), Postives = 137/218 (62.84%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLV-LLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYY 659
            IV   V  H  + P +A   LRMH HDCFV+GCD SVLL+   N ER A  N  L G  F+ I+  KR +E ACPG+VSCADIL L  RDS+  T G SW+VPTGRRDGRVS+ S   NN+P+P+++  + QR F+   L+ +DLV L+ G HTIG + C  +++R++N +G    DP +D  +   L+ R C    D +  +++D GS  TFD SY+
Sbjct:   40 IVRTTVASHFGSDPKVAPGLLRMHNHDCFVQGCDGSVLLSGP-NSERTAGANVNLHG--FEVIDDAKRQLEAACPGVVSCADILALAARDSVSLTNGQSWQVPTGRRDGRVSLASNV-NNLPSPSDSLAIQQRKFSAFRLNTRDLVTLVGGGHTIGTAACGFITNRIFNSSG-NTADPTMDQTFVPQLQ-RLCPQNGDGSARVDLDTGSGNTFDTSYF 251          
The following BLAST results are available for this feature:
BLAST of CN181812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER72_ARATH2.882e-5048.43Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER5_VITVI4.916e-5047.95Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]
PERN1_TOBAC8.385e-5046.36Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PER71_ARATH1.095e-4947.27Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]
PER14_ARATH4.161e-4945.74Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
PER15_IPOBA2.982e-4742.60Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER24_ARATH5.087e-4746.88Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PER64_ARATH1.133e-4644.59Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=... [more]
PER25_ARATH1.133e-4643.64Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]
PER62_ARATH1.933e-4646.33Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001I06_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001I06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181812 ID=CN181812; Name=CN181812; organism=Citrus sinensis; type=EST; length=668bp
GAGGAAAGATTGTGTTAGACTATGTTAACAAACACATCCACAATGCCCCC
TCATTAGCCGCATCTTTCCTCAGAATGCATTTCCATGATTGCTTTGTCAG
GGGCTGTGATGCATCCGTGCTGCTAAACTCAACAGGCAATCCTGAAAGAA
ATGCCGTTCCAAATCAAACATTGACAGGCGCAACCTTTGATTTCATCGAA
AGAGTGAAGAGACTAGTCGAAGATGCATGCCCCGGCATAGTTTCTTGTGC
AGATATTCTTACGTTAGTTACAAGAGACTCTATTGTAGCCACAGGAGGTC
CTTCCTGGAAAGTTCCAACCGGACGAAGAGACGGGCGAGTCTCCATTCGT
TCAGAAGCCCAAAACAATATCCCAGCTCCTACTAACAACTTCACCCTTCT
TCAACGAAGTTTTGCTAATCAAGGACTTGATTTGAAGGACCTGGTTCTGC
TCTCAGGTGCACACACAATCGGGGTCTCCCACTGCACTTCAGTTTCAAGC
CGGCTGTACAATTTCACAGGAGTGGGTGACCAAGACCCTGCTCTTGACAG
TGAATATGCAGCAAATCTCAAGGCAAGAAAGTGCAGAACTCCAAATGATA
ACACTACATTACTTGAAATGGACCCTGGTAGCCGCAAGACATTTGATCTT
AGCTACTACAATCTTTTG
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