CN181812

Overview
NameCN181812
Unique NameCN181812
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1894 contig Csv1_Contig1894:149..816. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 4.306e-46
Identity = 102/221 (46.15%), Postives = 128/221 (57.92%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGAT-FDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            IV  YV     N P +AAS LR+HFHDCFV GCDASVLL+S+G  E     N     A  F+ I+ +K  +E+ CP  VSCAD+L LV RDSIV  GGPSW+V  GRRD R +    +  NIP+P +    +   F  QGLDL DLV L G+HTIG S C     RLYN TG  D D  L+ +YA+ L+ + C    ++  L  +D  +   FD  YY  L
Sbjct:   56 IVQSYVANAYFNDPRMAASILRLHFHDCFVNGCDASVLLDSSGTMESEKRSNANRDSARGFEVIDEIKSALENECPETVSCADLLALVARDSIVICGGPSWEVYLGRRDAREASLIGSMENIPSPESTLQTILTMFNFQGLDLTDLVALLGSHTIGNSRCIGFRQRLYNHTGNNDPDQTLNQDYASMLQ-QGCPISGNDQNLFNLDYVTPTKFDNYYYKNL 275          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 5.624e-46
Identity = 101/217 (46.54%), Postives = 131/217 (60.37%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNP-ERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSY 656
            IV   V  H+ + P+ A   LRMHFHDCFV GCD SVLL   GN  ER AVPN++L G  F+ IE  K  +E ACP  VSCADILTL  RD++V TGG  W+VP GR DGR+S  S+   N+P P+++    ++ FA + L+  DLV L G HTIG + C  V  R  NF G G  DP++D  +   + A   + P +  T +E+D GS   FD S+
Sbjct:   52 IVRSVVQSHVRSIPANAPGILRMHFHDCFVHGCDGSVLL--AGNTSERTAVPNRSLRG--FEVIEEAKARLEKACPRTVSCADILTLAARDAVVLTGGQRWEVPLGRLDGRISQASDV--NLPGPSDSVAKQKQDFAAKTLNTLDLVTLVGGHTIGTAGCGLVRGRFVNFNGTGQPDPSIDPSFVPLILA---QCPQNGGTRVELDEGSVDKFDTSF 259          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 9.593e-46
Identity = 100/223 (44.84%), Postives = 133/223 (59.64%), Query Frame = 3
Query:    6 KIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLN--STGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            +IV+  + K I   P +AAS LR+HFHDCFV+GCDAS+LL+  +T   E+NA PN+      F  I+ +K  +E ACP  VSCADIL L  R S + +GGPSW++P GRRD R +  + A  NIPAP +    L   F  +GL+ +DLV LSG HTIGV+ CT+   RLYN  G    D  L+  Y   L++    T  DN  +  +D  S   FD +Y+ LL
Sbjct:   59 EIVMTVLEKAIAKEPRMAASLLRLHFHDCFVQGCDASILLDDSATIRSEKNAGPNKNSVRG-FQVIDEIKAKLEQACPQTVSCADILALAARGSTILSGGPSWELPLGRRDSRTASLNGANTNIPAPNSTIQNLLTMFQRKGLNEEDLVSLSGGHTIGVARCTTFKQRLYNQNGNNQPDETLERSYYYGLRSICPPTGGDN-NISPLDLASPARFDNTYFKLL 279          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.791e-45
Identity = 100/222 (45.05%), Postives = 137/222 (61.71%), Query Frame = 3
Query:    6 KIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYY-NLL 668
            +IV D V   +     +AAS +R+HFHDCFV GCDASVLL+ T N E+ A+PN       F+ I+ +K  VE+ACPG+VSCADILTL  RDS+  +GGP W+V  GR+DG V+ +S A NN+P+P      +   FA  GL++ D+V LSGAHT G + C   S+RL+NFTG G  D  L++   ++L+   C    +      +D  S   FD +Y+ NLL
Sbjct:   44 QIVRDQVKIALKAEIRMAASLIRLHFHDCFVNGCDASVLLDGT-NSEKLAIPNVNSVRG-FEVIDTIKAAVENACPGVVSCADILTLAARDSVYLSGGPQWRVALGRKDGLVANQSSA-NNLPSPFEPLDAIIAKFAAVGLNVTDVVALSGAHTFGQAKCDLFSNRLFNFTGAGTPDSTLETTLLSDLQT-VCPIGGNGNKTAPLDRNSTDAFDNNYFKNLL 261          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 181.415 bits (459), Expect = 3.645e-45
Identity = 97/220 (44.09%), Postives = 131/220 (59.55%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGN--PERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDL-KDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYY 659
            IV D +   + + P +AAS LR+HFHDCFV GCDAS+LL++T +   E++A PN   +   F  I+R+K  VE ACP  VSCADILT+  + ++   GGPSW+VP GRRD   +  + A  N+PAP      L+ SF N GLD   DLV LSG HT G + C  +  RLYNF+  G  DP L++ Y   L+  +C    + T L++ D  +   FD  YY
Sbjct:   46 IVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAAPNAN-SARGFPVIDRMKAAVETACPRTVSCADILTIAAQQAVNLAGGPSWRVPLGRRDSLQAFFALANTNLPAPFFTLPQLKASFQNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLNTTYLQTLRG-QCPRNGNQTVLVDFDLRTPTVFDNKYY 263          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.645e-45
Identity = 101/224 (45.09%), Postives = 137/224 (61.16%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLL-NSTG-NPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDL-KDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYY-NLL 668
            I+ D +   +   P +AAS LR+HFHDCFVRGCDAS+LL NST    E++A PN+      FD I+R+K  +E ACP  VSCADI+T+ ++ S++ +GGP W VP GRRD   +  + A   +P+P +  T L+ +FA+ GL+   DLV LSG HT G + C  V+ RLYNF G    DP+L+  Y   L+ R C    + T L+  D  +  TFD  YY NLL
Sbjct:   46 IIGDTIVNELRTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNKNSVRG-FDVIDRMKAAIERACPRTVSCADIITIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFSTLTQLKTAFADVGLNRPSDLVALSGGHTFGKAQCQFVTPRLYNFNGTNRPDPSLNPTYLVELR-RLCPQNGNGTVLVNFDSVTPTTFDRQYYTNLL 267          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.761e-45
Identity = 95/220 (43.18%), Postives = 134/220 (60.91%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGN--PERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDL-KDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYY 659
            IV D +   + + PS+AAS LR+HFHDCFV GCDAS+LL++T +   E++A  N   +   F  ++R+K  VE ACP  VSCAD+LT+  + S+   GGPSW+VP GRRD R +    A  N+PAP+     L+ +FAN GL+   DLV LSG HT G + C  +  RLYNF+  G  DP L++ Y   L+ ++C    + + L++ D  +   FD  YY
Sbjct:   26 IVRDIIINELRSDPSIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNAN-SARGFPVVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSRQAFLDLANANLPAPSFTLPELKAAFANVGLNRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLR-QQCPRNGNQSVLVDFDLRTPTVFDNKYY 243          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.385e-44
Identity = 97/220 (44.09%), Postives = 132/220 (60.00%), Query Frame = 3
Query:    6 KIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNST--GNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYY 659
            KI+L+ V       P + A  LRM FHDCF+RGCDAS+LL+ST     E++  PN  ++  +F  IE  KR +E ACP  VSCAD++ +  RD +  +GGP W V  GR+DG +S R+    N+P PT N + L +SFA +GL +KD+V LSG HTIG SHC+S  SRL NF+   D DP+++  +A  LK +  RT N       +   +   FD  YY
Sbjct:   40 KIILETVRNATLYDPKVPARLLRMFFHDCFIRGCDASILLDSTRSNQAEKDGPPN--ISVRSFYVIEDAKRKLEKACPRTVSCADVIAIAARDVVTLSGGPYWSVLKGRKDGTIS-RANETRNLPPPTFNVSQLIQSFAARGLSVKDMVTLSGGHTIGFSHCSSFESRLQNFSKFHDIDPSMNYAFAQTLKKKCPRTSNRGKNAGTVLDSTSSVFDNVYY 256          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.385e-44
Identity = 100/221 (45.25%), Postives = 130/221 (58.82%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTG-NPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            IV   V        + A + LRM FHDCFV GCDASV + S   + E++A  N++L G  FD + + K  VE  CPG+VSCADIL L  RD +V  GGP +KV  GRRDG VS  S     +P P  +   L + FA+ GL L D++ LSGAHTIG SHC   ++RL+NF+     DP +D  YA  L  + C  PN +  ++++D  SR TFD SYY  L
Sbjct:   47 IVKQAVTTKFKQTVTTAPATLRMFFHDCFVEGCDASVFIASENEDAEKDADDNKSLAGDGFDTVIKAKTAVESQCPGVVSCADILALAARDVVVLVGGPEFKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLSLTDMIALSGAHTIGSSHCNRFANRLHNFSTFMPVDPTMDPVYAQQL-IQACSDPNPD-AVVDIDLTSRDTFDNSYYQNL 265          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.385e-44
Identity = 99/223 (44.39%), Postives = 130/223 (58.30%), Query Frame = 3
Query:   12 VLDYVNKHIHNA----PSLAASFLRMHFHDCFVRGCDASVLLNSTGN--PERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLD-LKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYY 659
            V D V   I NA    P +AAS LR+HFHDCFV GCDAS+LL++T +   E++A  N   +   FD I+++K  +E ACP  VSCAD+L +  ++SIV  GGPSW VP GRRD        A +N+P P++    L+  F N GLD   DLV LSG HT G S C  +  RLYNF   G  DP LD  Y A L+ ++C    + + L++ D  +   FD  YY
Sbjct:   36 VFDIVTNTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNAN-SARGFDVIDKMKAAIEKACPRTVSCADMLAIAAKESIVLAGGPSWMVPNGRRDSLRGFMDLANDNLPGPSSTLKQLKDRFKNVGLDRSSDLVALSGGHTFGKSQCQFIMDRLYNFGETGLPDPTLDKSYLATLR-KQCPRNGNQSVLVDFDLRTPTLFDNKYY 256          
The following BLAST results are available for this feature:
BLAST of CN181812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER36_ARATH4.306e-4646.15Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PER69_ARATH5.624e-4646.54Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PER9_ARATH9.593e-4644.84Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]
PERN_ARMRU2.791e-4545.05Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER32_ARATH3.645e-4544.09Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]
PER23_ARATH3.645e-4545.09Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]
PER1C_ARMRU4.761e-4543.18Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER66_ARATH1.385e-4444.09Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]
PER55_ARATH1.385e-4445.25Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER38_ARATH1.385e-4444.39Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001I06_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001I06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181812 ID=CN181812; Name=CN181812; organism=Citrus sinensis; type=EST; length=668bp
GAGGAAAGATTGTGTTAGACTATGTTAACAAACACATCCACAATGCCCCC
TCATTAGCCGCATCTTTCCTCAGAATGCATTTCCATGATTGCTTTGTCAG
GGGCTGTGATGCATCCGTGCTGCTAAACTCAACAGGCAATCCTGAAAGAA
ATGCCGTTCCAAATCAAACATTGACAGGCGCAACCTTTGATTTCATCGAA
AGAGTGAAGAGACTAGTCGAAGATGCATGCCCCGGCATAGTTTCTTGTGC
AGATATTCTTACGTTAGTTACAAGAGACTCTATTGTAGCCACAGGAGGTC
CTTCCTGGAAAGTTCCAACCGGACGAAGAGACGGGCGAGTCTCCATTCGT
TCAGAAGCCCAAAACAATATCCCAGCTCCTACTAACAACTTCACCCTTCT
TCAACGAAGTTTTGCTAATCAAGGACTTGATTTGAAGGACCTGGTTCTGC
TCTCAGGTGCACACACAATCGGGGTCTCCCACTGCACTTCAGTTTCAAGC
CGGCTGTACAATTTCACAGGAGTGGGTGACCAAGACCCTGCTCTTGACAG
TGAATATGCAGCAAATCTCAAGGCAAGAAAGTGCAGAACTCCAAATGATA
ACACTACATTACTTGAAATGGACCCTGGTAGCCGCAAGACATTTGATCTT
AGCTACTACAATCTTTTG
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