CN181812

Overview
NameCN181812
Unique NameCN181812
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 9.928e-43
Identity = 96/215 (44.65%), Postives = 131/215 (60.93%), Query Frame = 3
Query:   24 VNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGN--PERNAVPN-QTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYY 659
            VN  +     + AS LR+HFHDCFV+GCDASVLL+ T N   E+ A PN  ++ G  F+ I+ +K  VE  CPG+VSCADIL +  RDS+VA GG SW V  GRRD   +  S A +++PAP  N + L  +F+N+G   K+LV LSGAHTIG + CT+  +R+YN       +  +D  YA +L+A  C +   +T L   D  +   FD +YY
Sbjct:   44 VNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNFTGEKTAGPNANSIRG--FEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFRTRIYN-------ESNIDPTYAKSLQA-NCPSVGGDTNLSPFDVTTPNKFDNAYY 248          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 9.928e-43
Identity = 91/206 (44.17%), Postives = 121/206 (58.74%), Query Frame = 3
Query:   54 LAASFLRMHFHDCFVRGCDASVLLNSTGN--PERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDP--ALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYY 659
            +AAS LR+HFHDCFV GCD S+LLN + +   E+NA PN+      F+ IE +K  +E +CP  VSCADI+ L  R+++V TGGP W VP GRRD   +    A  N+P+P      +   F   GLDLKD+V+LSGAHTIG + C  +  RL+NF G G  DP  A  S   + LK       + ++ L  +D  S   FD +YY
Sbjct:   78 IAASLLRLHFHDCFVNGCDGSILLNDSEDFKGEKNAQPNRNSVRG-FEVIEDIKSDIESSCPLTVSCADIVALAAREAVVLTGGPFWPVPLGRRDSLTASEQAANTNLPSPFEALENITAKFVTLGLDLKDVVVLSGAHTIGFAQCFVIKHRLFNFKGSGQPDPNLAASSALLSKLKDTCPNVDSSDSKLAALDAASSVKFDNAYY 282          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.297e-42
Identity = 94/220 (42.73%), Postives = 128/220 (58.18%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGN--PERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDL-KDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYY 659
            IV + +   + + P +AAS LR+HFHDCFV GCDAS+LL++T +   E++A  N   +   F  I+R+K  VE ACP  VSCAD+LT+  + S+   GGPSW+VP GRRD   +    A  N+PAP      L+ SF N GLD   DLV LSG HT G + C  +  RLYNF+  G  DP L++ Y   L+   C    + + L++ D  +   FD  YY
Sbjct:   47 IVRETIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNAN-SARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLELANANLPAPFFTLPQLKASFRNVGLDRPSDLVALSGGHTFGKNQCQFILDRLYNFSNTGLPDPTLNTTYLQTLRG-LCPLNGNRSALVDFDLRTPTVFDNKYY 264          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 2.212e-42
Identity = 94/220 (42.73%), Postives = 128/220 (58.18%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGN--PERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLD-LKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYY 659
            IV D +   + + P +AAS LR+HFHDCFV GCDAS+LL++T +   E++A  N   +   F  I+R+K  VE ACP  VSCAD+LT+  + S+   GGPSW+VP GRRD   +    A  N+PAP      L+ SF N GL+   DLV LSG HT G + C  +  RLYNF+  G  DP L++ Y   L+   C    + + L++ D  +   FD  YY
Sbjct:   47 IVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRG-LCPLNGNLSALVDFDLRTPTIFDNKYY 264          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.927e-42
Identity = 95/216 (43.98%), Postives = 129/216 (59.72%), Query Frame = 3
Query:   24 VNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYY-NLL 668
            VN  +   P + AS LR+HFHDCFVRGCDAS+LLN T   E++  PN TL    F  +  +K  VE  CPGIVSCADIL +  RD +VA GGPSW V  GRRD   S   +  +++P PT++   L  ++  + L+  D+V LSGAHTIG + C+S +  +YN       D  ++S +AA+L+A   R    +T L  +D  +   FD +YY NLL
Sbjct:   51 VNSAVRQEPRVGASLLRLHFHDCFVRGCDASLLLNDTSG-EQSQGPNLTLNPRGFVVVNSIKAQVESVCPGIVSCADILAVAARDGVVALGGPSWTVLLGRRDSTASFAGQT-SDLPPPTSSLGQLLSAYNKKNLNPTDMVALSGAHTIGQAQCSSFNDHIYN-------DTNINSAFAASLRANCPRA--GSTALAPLDTTTPNAFDNAYYTNLL 255          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 170.244 bits (430), Expect = 8.404e-42
Identity = 92/219 (42.01%), Postives = 129/219 (58.90%), Query Frame = 3
Query:   24 VNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGN--PERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKC--RTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            V   + + P + AS LR+ FHDCFV GCD S+LL+ T +   E+NA PN+  +   F  I  +K  VE ACPG+VSCADIL +  RDS+V  GGP+W V  GRRD + + ++ A +NIPAP+ + + L  SF+  GL  +D+V LSGAHTIG S C +  +R+YN T +        +   A L+ R C     + +  L  +D  S  +FD SY+  L
Sbjct:   22 VKSAVSSQPRMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAGPNRN-SARGFTVINDIKSAVEKACPGVVSCADILAIAARDSVVQLGGPNWNVKVGRRDAKTASQAAANSNIPAPSMSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCVNFRARVYNETNI--------NAAFATLRQRSCPRAAGSGDANLAPLDINSATSFDNSYFKNL 231          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 8.404e-42
Identity = 95/220 (43.18%), Postives = 125/220 (56.82%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            IV   V  +    P+ A   LRMHFHDCFV+GCDASVLL    N ER A+PN +L G  F+ IE  K  +E ACP  VSCADIL L  RD +   GGP W VP GR DGR+S+ S     +P PT++  + +  FA + L+ +DLV+L+  HTIG + C     R +N+   G  DP +   +   ++A +C    D  T + +D GS   FD SY N L
Sbjct:   49 IVRSVVESNYLANPANAPGILRMHFHDCFVQGCDASVLLAGP-NSERTAIPNLSLRG--FNVIEEAKTQLEIACPRTVSCADILALAARDFVHLAGGPWWPVPLGRLDGRISLASNV--ILPGPTDSVAVQKLRFAEKNLNTQDLVVLAAGHTIGTAGCIVFRDRFFNYDNTGSPDPTIAPSFVPLIQA-QCPLNGDPATRVVLDTGSGDQFDTSYLNNL 262          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.098e-41
Identity = 85/219 (38.81%), Postives = 134/219 (61.19%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGN--PERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYY 659
            IV   + + + +   + AS +R+HFHDCFV GCDAS+LL+ TG+   E+NA PN   +   F+ ++ +K  +E+ACPG+VSC+D+L L +  S+   GGPSW V  GRRD   +  + A ++IP+P  + + +   F+  GL+  DLV LSGAHT G + C   ++RL+NF+G G+ DP L+S   + L+ + C      +T+  +D  +   FD +Y+
Sbjct:   47 IVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSIQSEKNAGPNVN-SARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFNFSGTGNPDPTLNSTLLSTLQ-QLCPQNGSASTITNLDLSTPDAFDNNYF 263          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.098e-41
Identity = 99/229 (43.23%), Postives = 131/229 (57.21%), Query Frame = 3
Query:   12 VLDYVNKHIHNAPS----LAASFLRMHFHDCFVRGCDASVLLNSTGN--PERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTP----NDNTTLLEMDPGSRKTFDLSYYNLL 668
            V D V   + +A S    + AS LR+ FHDCFV GCDASVLL+ T +   E+ AVPN+       + I+ +K  VE  CPG+VSCADI+ +  RDS+V  GGP W V  GRRD + +  S A NNIP PT++ + L   F  QGL  +D+V LSGAHTIG + CTS  +R+YN T +       DS +A   K R+   P    + +  L  +D  +  TFD  YY  L
Sbjct:   39 VFDTVKSGVQSAVSKERRMGASLLRLFFHDCFVNGCDASVLLDDTSSFTGEQTAVPNKNSIRG-LNVIDNIKSQVESVCPGVVSCADIIAIAARDSVVILGGPDWDVKLGRRDSKTASLSGANNNIPPPTSSLSNLISKFQAQGLSTRDMVALSGAHTIGQARCTSFRARIYNETNI-------DSSFA---KTRQASCPSASGSGDNNLAPLDLQTPTTFDNYYYKNL 256          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.098e-41
Identity = 92/222 (41.44%), Postives = 129/222 (58.11%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGATFDFIERVKRLVEDA--CPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            IV + V +        A + LR+ FHDCFVRGCDAS+++ S    ER+   + +L G  FD + + K+ V+    C   VSCADIL L TR+ +V TGGPS+ V  GRRDGR+S ++  Q+ +P P  N   L   F+  GL   D++ LSGAHTIG +HC  +S R+YNF+     DP+++  Y   LK + C    D    + MDP S +TFD +Y+  L
Sbjct:   42 IVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASIMIASPS--ERDHPDDMSLAGDGFDTVVKAKQAVDSNPNCRNKVSCADILALATREVVVLTGGPSYPVELGRRDGRISTKASVQSQLPQPEFNLNQLNGMFSRHGLSQTDMIALSGAHTIGFAHCGKMSKRIYNFSPTTRIDPSINRGYVVQLK-QMCPIGVDVRIAINMDPTSPRTFDNAYFKNL 260          
The following BLAST results are available for this feature:
BLAST of CN181812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER1_ARAHY9.928e-4344.65Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PER10_ARATH9.928e-4344.17Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PER34_ARATH1.297e-4242.73Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PER1A_ARMRU2.212e-4242.73Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER66_MAIZE4.927e-4243.98Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PERP7_BRARA8.404e-4242.01Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PER70_ARATH8.404e-4243.18Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PER53_ARATH1.098e-4138.81Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PER4_VITVI1.098e-4143.23Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PER45_ARATH1.098e-4141.44Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001I06_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001I06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181812 ID=CN181812; Name=CN181812; organism=Citrus sinensis; type=EST; length=668bp
GAGGAAAGATTGTGTTAGACTATGTTAACAAACACATCCACAATGCCCCC
TCATTAGCCGCATCTTTCCTCAGAATGCATTTCCATGATTGCTTTGTCAG
GGGCTGTGATGCATCCGTGCTGCTAAACTCAACAGGCAATCCTGAAAGAA
ATGCCGTTCCAAATCAAACATTGACAGGCGCAACCTTTGATTTCATCGAA
AGAGTGAAGAGACTAGTCGAAGATGCATGCCCCGGCATAGTTTCTTGTGC
AGATATTCTTACGTTAGTTACAAGAGACTCTATTGTAGCCACAGGAGGTC
CTTCCTGGAAAGTTCCAACCGGACGAAGAGACGGGCGAGTCTCCATTCGT
TCAGAAGCCCAAAACAATATCCCAGCTCCTACTAACAACTTCACCCTTCT
TCAACGAAGTTTTGCTAATCAAGGACTTGATTTGAAGGACCTGGTTCTGC
TCTCAGGTGCACACACAATCGGGGTCTCCCACTGCACTTCAGTTTCAAGC
CGGCTGTACAATTTCACAGGAGTGGGTGACCAAGACCCTGCTCTTGACAG
TGAATATGCAGCAAATCTCAAGGCAAGAAAGTGCAGAACTCCAAATGATA
ACACTACATTACTTGAAATGGACCCTGGTAGCCGCAAGACATTTGATCTT
AGCTACTACAATCTTTTG
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