CN181812

Overview
NameCN181812
Unique NameCN181812
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1894 contig Csv1_Contig1894:149..816. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 1.098e-41
Identity = 89/200 (44.50%), Postives = 127/200 (63.50%), Query Frame = 3
Query:   48 PSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFD 647
            P+L A  LR+HFHDCFV GCD S+L+N+    E+NA  ++ + G  F+ +E VK  +E ACPG+VSC+DI+ L  RD+I    GP+++VPTGRRDGRVS  S A+ ++P  +++  +L+  F  +GL+ KDLVLLS AHTIG + C  +S RLY+F   G  DP ++  +   L   +C    D    L +D  S + FD
Sbjct:   54 PNLPAILLRLHFHDCFVEGCDGSILVNNGAISEKNAFGHEGVRG--FEIVEAVKAELEAACPGVVSCSDIVALAARDAISLANGPAYEVPTGRRDGRVSNMSLAK-DMPEVSDSIEILKAKFMQKGLNAKDLVLLSAAHTIGTTACFFMSKRLYDFLPGGQPDPTINPTFLPEL-TTQCPQNGDINVRLPIDRFSERLFD 249          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER2_ORYSJ (Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.098e-41
Identity = 97/218 (44.50%), Postives = 135/218 (61.93%), Query Frame = 3
Query:   24 VNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQ-TLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCR-TPNDNTTLLEMDPGSRKTFDLSYY-NLL 668
            V   +++ P + AS +R+HFHDCFV+GCDASVLL+     E+NA PN  +L G  F+ ++ +K  VE  C   VSCADIL +  RDS+VA GGPSW V  GRRD   +  S+A  ++PAP+++   L  +F+ +GLD+ D+V LSGAHTIG + C +   RLYN T +       DS +A  LKA   R T + ++ L  +D  +   FD +YY NLL
Sbjct:   45 VTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSGQ---EQNAGPNAGSLRG--FNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLYNETNI-------DSSFATALKANCPRPTGSGDSNLAPLDTTTPNAFDSAYYTNLL 250          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER2_ORYSI (Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 1.098e-41
Identity = 97/218 (44.50%), Postives = 135/218 (61.93%), Query Frame = 3
Query:   24 VNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQ-TLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCR-TPNDNTTLLEMDPGSRKTFDLSYY-NLL 668
            V   +++ P + AS +R+HFHDCFV+GCDASVLL+     E+NA PN  +L G  F+ ++ +K  VE  C   VSCADIL +  RDS+VA GGPSW V  GRRD   +  S+A  ++PAP+++   L  +F+ +GLD+ D+V LSGAHTIG + C +   RLYN T +       DS +A  LKA   R T + ++ L  +D  +   FD +YY NLL
Sbjct:   45 VTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSGQ---EQNAGPNAGSLRG--FNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLYNETNI-------DSSFATALKANCPRPTGSGDSNLAPLDTTTPNAFDSAYYTNLL 250          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.434e-41
Identity = 94/205 (45.85%), Postives = 128/205 (62.44%), Query Frame = 3
Query:   54 LAASFLRMHFHDCFVRGCDASVLL--NSTGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQ-NNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYY 659
            LAA+ LR+HFHDCFV+GC+ASVLL  +++G  E++++PN TL    F  I  ++ LV+  C  +VSC+DIL L  RDS+V +GGP + VP GRRD       E   NN+P P  N + L   FAN+ L++ DLV LSG HTIG++HC S + RLY      +QDP ++  +A +LK R C T N + T +  D  S   FD  YY
Sbjct:   74 LAAAILRIHFHDCFVQGCEASVLLAGSASGPGEQSSIPNLTLRQQAFVVINNLRALVQKKCGQVVSCSDILALAARDSVVLSGGPDYAVPLGRRDSLAFASQETTLNNLPPPFFNASQLIADFANRNLNITDLVALSGGHTIGIAHCPSFTDRLY-----PNQDPTMNQFFANSLK-RTCPTANSSNTQVN-DIRSPDVFDNKYY 271          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.872e-41
Identity = 93/225 (41.33%), Postives = 124/225 (55.11%), Query Frame = 3
Query:    6 KIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGN--PERNAVPNQTLTGATFDFIERVKRLVEDA--CPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            +IV + V K I    +   + LR++FHDCFV GCDASV++ ST     E++   N +L G  FD + + K  V+    C   VSCADILT+ TRD +   GGP + V  GRRDG  S  S     +P PT +   L   FA  GL   D++ LSGAHT+G +HCT V +RLYNF    + DP ++ +Y   LKA  C    D    + MDP + + FD  YY  L
Sbjct:   41 QIVRNAVQKKIQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNLAGGPQYAVELGRRDGLSSSASSVTGKLPKPTFDLNQLNALFAENGLSPNDMIALSGAHTLGFAHCTKVFNRLYNFNKTNNVDPTINKDYVTELKA-SCPQNIDPRVAINMDPNTPRQFDNVYYKNL 264          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.872e-41
Identity = 92/225 (40.89%), Postives = 129/225 (57.33%), Query Frame = 3
Query:    6 KIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNST--GNPERNAVPNQTLTGATFDFIERVKRLVED--ACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            +IV + V K I        + LR+ FHDCFV GCDASV++ ST     E++   N +L G  FD + + K+ ++   +C   VSCADILTL TRD +VA GGPS++V  GR DG VS  S  + N+P P++N   L   F    L  +D++ LS AHT+G +HC  V  R++ F G+   DP L+  YA  L+ + C    D    + MDP + KTFD +Y+  L
Sbjct:   41 QIVRNAVQKKIKKTFVAVPATLRLFFHDCFVNGCDASVMIQSTPKNKAEKDHPDNISLAGDGFDVVIQAKKALDSNPSCRNKVSCADILTLATRDVVVAAGGPSYEVELGRFDGLVSTASSVEGNLPGPSDNVDKLNALFTKNKLTQEDMIALSAAHTLGFAHCGKVFKRIHKFNGINSVDPTLNKAYAIELQ-KACPKNVDPRIAINMDPVTPKTFDNTYFKNL 264          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.115e-41
Identity = 92/216 (42.59%), Postives = 129/216 (59.72%), Query Frame = 3
Query:   24 VNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYY-NLL 668
            VN  +     + AS LR+HFHDCF++GCDAS+LLN T   E+   PN TL    FD +  +K  VE ACPG+VSCADIL +  RD +VA GGPSW V  GRRD   S  S+  +++P PT++   L  +++ + LD  D+V LSGAHTIG + C+S +  +YN       D  +++ +A +LKA  C   +  ++L  +D  +   F   YY NLL
Sbjct:   51 VNSAVAQQARVGASLLRLHFHDCFIQGCDASILLNDTSG-EQTQPPNLTLNPRAFDVVNSIKAQVEAACPGVVSCADILAVAARDGVVALGGPSWTVLLGRRDSTGSFPSQT-SDLPPPTSSLQALLAAYSKKNLDATDMVALSGAHTIGQAQCSSFNGHIYN-------DTNINAAFATSLKA-NC-PMSGGSSLAPLDTMTPTVFGNDYYKNLL 255          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.214e-40
Identity = 89/219 (40.64%), Postives = 131/219 (59.82%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNP--ERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYY 659
            IV + V +     PS+ A+  RMHFHDCFV+GCDAS+L++ T +   E+NA PN ++ G  F+ I+ +K  +E  CP  VSC+DI+TL TRD++   GGPS+ VPTGRRDG VS   +A   +P P  +   +   F N+G+++ D V L GAHT+G++ C +   R+ NF G G  DP++D   A  L+   C  P     L +  P +  +FD  ++
Sbjct:   38 IVENLVRQQFARDPSITAALTRMHFHDCFVQGCDASLLIDPTTSQLSEKNAGPNFSVRG--FELIDEIKTALEAQCPSTVSCSDIVTLATRDAVFLGGGPSYVVPTGRRDGFVSNPEDANEILPPPFISVEGMLSFFGNKGMNVFDSVALLGAHTVGIASCGNFVDRVTNFQGTGLPDPSMDPTLAGRLR-NTCAVPGGFAALDQSMPVTPVSFDNLFF 253          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.585e-40
Identity = 86/222 (38.74%), Postives = 128/222 (57.66%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGN--PERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            IV   + + + +   +  S +R+HFHDCFV GCD S+LL+ T +   E+NA  N   T   F+ ++ +K  +E+ACPGIVSC+DIL L +  S+   GGPSW V  GRRDG  +  S A +++P+P      +   F   GL   D+V LSGAHT G   C + ++RL+NF G G+ DP L+S   ++L+ + C     NT +  +D  +   FD +Y+  L
Sbjct:   48 IVRSTIQQALQSDARIGGSLIRLHFHDCFVNGCDGSLLLDDTSSIQSEKNAPANANSTRG-FNVVDSIKTALENACPGIVSCSDILALASEASVSLAGGPSWTVLLGRRDGLTANLSGANSSLPSPFEGLNNITSKFVAVGLKTTDVVSLSGAHTFGRGQCVTFNNRLFNFNGTGNPDPTLNSTLLSSLQ-QLCPQNGSNTGITNLDLSTPDAFDNNYFTNL 267          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 1.585e-40
Identity = 93/222 (41.89%), Postives = 128/222 (57.66%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGATFDFIERVKRLVE--DACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            IV + V +        A + LR+ FHDCFVRGCDAS+LL S    E++   +++L G  FD + + K+ ++    C   VSCADIL L TRD +V TGGP++ V  GRRDGR+S  +  Q+++P P+     L   FA  GL   D++ LSGAHTIG +HC   S R+YNF+     DP L+  YA  L+ + C    D    + MDP S  TFD +Y+  L
Sbjct:   40 IVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASPS--EKDHPDDKSLAGDGFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLSQTDMIALSGAHTIGFAHCGKFSKRIYNFSPKRPIDPTLNIRYALQLR-QMCPIRVDLRIAINMDPTSPNTFDNAYFKNL 258          
The following BLAST results are available for this feature:
BLAST of CN181812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER43_ARATH1.098e-4144.50Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PER2_ORYSJ1.098e-4144.50Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER2_ORYSI1.098e-4144.50Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX1... [more]
PER12_ARATH1.434e-4145.85Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PER51_ARATH1.872e-4141.33Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PER35_ARATH1.872e-4140.89Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PER42_MAIZE7.115e-4142.59Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PER28_ARATH1.214e-4040.64Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER54_ARATH1.585e-4038.74Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER16_ARATH1.585e-4041.89Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001I06_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001I06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181812 ID=CN181812; Name=CN181812; organism=Citrus sinensis; type=EST; length=668bp
GAGGAAAGATTGTGTTAGACTATGTTAACAAACACATCCACAATGCCCCC
TCATTAGCCGCATCTTTCCTCAGAATGCATTTCCATGATTGCTTTGTCAG
GGGCTGTGATGCATCCGTGCTGCTAAACTCAACAGGCAATCCTGAAAGAA
ATGCCGTTCCAAATCAAACATTGACAGGCGCAACCTTTGATTTCATCGAA
AGAGTGAAGAGACTAGTCGAAGATGCATGCCCCGGCATAGTTTCTTGTGC
AGATATTCTTACGTTAGTTACAAGAGACTCTATTGTAGCCACAGGAGGTC
CTTCCTGGAAAGTTCCAACCGGACGAAGAGACGGGCGAGTCTCCATTCGT
TCAGAAGCCCAAAACAATATCCCAGCTCCTACTAACAACTTCACCCTTCT
TCAACGAAGTTTTGCTAATCAAGGACTTGATTTGAAGGACCTGGTTCTGC
TCTCAGGTGCACACACAATCGGGGTCTCCCACTGCACTTCAGTTTCAAGC
CGGCTGTACAATTTCACAGGAGTGGGTGACCAAGACCCTGCTCTTGACAG
TGAATATGCAGCAAATCTCAAGGCAAGAAAGTGCAGAACTCCAAATGATA
ACACTACATTACTTGAAATGGACCCTGGTAGCCGCAAGACATTTGATCTT
AGCTACTACAATCTTTTG
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