CN181812

Overview
NameCN181812
Unique NameCN181812
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1894 contig Csv1_Contig1894:149..816. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.531e-40
Identity = 80/203 (39.41%), Postives = 116/203 (57.14%), Query Frame = 3
Query:   60 ASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            A  +R+HFHDCFV GCD S+LL++ G       P     G  FD ++ +K  +E+ CPG+VSCADIL L +   +V   GPSW+V  GR+D   + RS A ++IP+P     ++   F N+G+DL DLV LSGAHT G + C +   RL+NF G G+ D  +D+ +   L+    +  N+  T   +D  +   FD  Y+  L
Sbjct:   56 AKIIRLHFHDCFVNGCDGSILLDTDGTQTEKDAPANVGAGG-FDIVDDIKTALENVCPGVVSCADILALASEIGVVLAKGPSWQVLFGRKDSLTANRSGANSDIPSPFETLAVMIPQFTNKGMDLTDLVALSGAHTFGRARCGTFEQRLFNFNGSGNPDLTVDATFLQTLQGICPQGGNNGNTFTNLDISTPNDFDNDYFTNL 257          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 4.612e-40
Identity = 92/224 (41.07%), Postives = 131/224 (58.48%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGN--PERNAVPN-QTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYY-NLL 668
            IV  +V   +   P +AAS LR+HFHDCFV GCDASVLL+ T     E+ A PN  +L G  F+ I+ +K  +E  CP  VSCADIL +  RDS+V +GGP W+V  GR+D R + +  A N +P+P +  + L  +F N GL   D+V LSG HT+G + CTS ++RL         +   + E+  +L+ + C T   +  + ++D  +  TFD  YY NLL
Sbjct:   65 IVYSWVETTVLEDPRMAASLLRLHFHDCFVNGCDASVLLDDTEGLVGEKTAPPNLNSLRG--FEVIDSIKSDIESVCPETVSCADILAMAARDSVVVSGGPRWEVEVGRKDSRTASKQAATNGLPSPNSTVSTLISTFQNLGLSQTDMVALSGGHTLGKARCTSFTARLQPLQTGQPANHGDNLEFLESLQ-QLCSTVGPSVGITQLDLVTPSTFDNQYYVNLL 285          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.023e-40
Identity = 84/219 (38.36%), Postives = 130/219 (59.36%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGN--PERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYY 659
            IV   + +   +   + AS +R+HFHDCFV GCDAS+LL+ +G+   E+NA PN   +   F+ ++ +K  +E+ CPG+VSC+DIL L +  S+  TGGPSW V  GRRD   +  + A + IP+P    + +   F+  GL+  DLV LSGAHT G + C   ++RL+NF+G    DP L+S   ++L+ + C      +T+  +D  +   FD +Y+
Sbjct:   17 IVRSTIQQAFQSDTRIGASLIRLHFHDCFVDGCDASILLDDSGSIQSEKNAGPNAN-SARGFNVVDNIKTALENTCPGVVSCSDILALASEASVSLTGGPSWTVLLGRRDSLTANLAGANSAIPSPFEGLSNITSKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFNFSGTNGPDPTLNSTLLSSLQ-QLCPQNGSASTITNLDLSTPDAFDNNYF 233          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.023e-40
Identity = 100/225 (44.44%), Postives = 134/225 (59.56%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQ---DPALDSEYAANLKARKCRTPND-NTTLLEMDPGSRKTFDLSYY-NLL 668
            IV + V     + PS+    LR+ FHDCFV+GCD SVL+   G  ER+   N +L G  F  IE VK ++E  CPG VSCADIL L  RD++ A GGP   +PTGRRDGRVS+ +  + NI         +   F+++GL + DLV+LSGAHTIG +HC + +SR +     G+    D +LD+ YA  L   KC +  D  TT+++ DP +  TFD  YY NLL
Sbjct:   46 IVRNTVRSASSSDPSVLGKLLRLIFHDCFVQGCDGSVLIRGNGT-ERSDPGNASLGG--FAVIESVKNILEIFCPGTVSCADILVLAARDAVEALGGPVVPIPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVHDLVVLSGAHTIGAAHCNTFNSR-FKLDPKGNLELIDASLDNSYAQTL-VNKCSSSLDPTTTVVDNDPETSSTFDNQYYKNLL 265          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.027e-39
Identity = 89/225 (39.56%), Postives = 124/225 (55.11%), Query Frame = 3
Query:    6 KIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGN--PERNAVPNQTLTGATFDFIERVKRLVEDA--CPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            +IV + V K +    +   + LR++FHDCFV GCDASV++ ST N   E++   N +L G  FD + + K  ++    C   VSCADILT+ TRD +   GGP + V  GR DG  S  +     +P PT++   L   FA  GL L D++ LSGAHT+G +HCT V +R+Y F      DP ++ +Y   LKA  C    D    + MDP + + FD  YY  L
Sbjct:   41 QIVRNAVQKKVQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNNNKAEKDHEENLSLAGDGFDTVIKAKEALDAVPNCRNKVSCADILTMATRDVVNLAGGPQYDVELGRLDGLSSTAASVGGKLPHPTDDVNKLTSLFAKNGLSLNDMIALSGAHTLGFAHCTKVFNRIYTFNKTTKVDPTVNKDYVTELKA-SCPRNIDPRVAINMDPTTPRQFDNVYYKNL 264          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.752e-39
Identity = 89/217 (41.01%), Postives = 129/217 (59.45%), Query Frame = 3
Query:   24 VNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGN--PERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            V + I +   +AAS +R+HFHDCFV+GCDAS+LL+ T +   E+ A+PN   +   F  IE  KR VE  CPG+VSCADILT+  RD+  A GGPSW V  GRRD   + ++ A+ ++P P +    L  SFA++GL  +D+V LSGAHTIG + C     R+Y+          +D+ +A+  + R+C    +N  L  +D  +   FD +Y+  L
Sbjct:   49 VRQAISSERRMAASLIRLHFHDCFVQGCDASILLDETPSIESEKTALPNLG-SARGFGIIEDAKREVEKICPGVVSCADILTVAARDASAAVGGPSWTVKLGRRDSTTASKTLAETDLPGPFDPLNRLISSFASKGLSTRDMVALSGAHTIGQAQCFLFRDRIYS------NGTDIDAGFAST-RRRQCPQEGENGNLAPLDLVTPNQFDNNYFKNL 257          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER7_ARATH (Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.989e-39
Identity = 91/218 (41.74%), Postives = 134/218 (61.47%), Query Frame = 3
Query:    6 KIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYY 659
            KIV+  V +   +  SL  + LR+ FHDC V GCDASVLL+  G  ER +  ++TL G  F+ I+ +K  +E +CPG VSCADILT  +R + V  GGP W    GRRD + S   + +  +P+   + T L  +F + GL++ DLV+LSGAHTIG + C ++ SRLYN+      DP++D++YA  L+ R+CR  ++    +++DP +   FD  YY
Sbjct:   65 KIVVTKVREWTKSDSSLGPALLRLIFHDCGVTGCDASVLLDYEGT-ERRSPASKTLRG--FELIDDIKSEMEKSCPGKVSCADILTSASRAATVQLGGPYWPNVYGRRDSKHSYARDVEK-VPSGRRDVTALLETFQSYGLNVLDLVVLSGAHTIGKASCGTIQSRLYNYNATSGSDPSIDAKYADYLQ-RRCRWASET---VDLDPVTPAVFDNQYY 274          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 160.999 bits (406), Expect = 5.099e-39
Identity = 77/193 (39.90%), Postives = 122/193 (63.21%), Query Frame = 3
Query:    6 KIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNS--TGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKAR 578
            KI+   +    +  PS+A   +R+ FHDCF+ GCDASVLL++      E++A PN +L G  FD I+ VK  +E+ CPG+VSCAD+L L  R++++  GGP + + TGR+D   + R  A++ +PAP    +++ + F+ +G + ++ V L GAH+IG++HCT   +RLYNF+  G  DP L+  +   LK +
Sbjct:   82 KIIAKAIRDIYNVTPSVAPPIIRLLFHDCFIEGCDASVLLDADEAHTSEKDASPNLSLKG--FDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEHELPAPDATLSVILQRFSFRGFNERETVSLFGAHSIGITHCTFFKNRLYNFSATGKPDPELNPGFLQELKTK 272          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.136e-38
Identity = 89/221 (40.27%), Postives = 127/221 (57.47%), Query Frame = 3
Query:   24 VNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTG----NPERNAVPNQ-TLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTG-VGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            + +   N   L A  +R+HFHDCFV GCD SVLL++        E+ A  N  +L G  F+ I+ +K  +E+ CPG+VSCADIL +    S+   GGPS  V  GRRDGR +IR++A   +P   ++  +L   F+   LD  DLV LSGAHT G   C  +++RL+NF+G  G  DP+++ E+   L+ R+C    D T    +DP S  +FD  Y+  L
Sbjct:   45 IERASRNDVRLTAKVMRLHFHDCFVNGCDGSVLLDAAPADGVEGEKEAFQNAGSLDG--FEVIDDIKTALENVCPGVVSCADILAIAAEISVALAGGPSLDVLLGRRDGRTAIRADAVAALPLGPDSLEILTSKFSVHNLDTTDLVALSGAHTFGRVQCGVINNRLHNFSGNSGQSDPSIEPEFLQTLR-RQCPQGGDLTARANLDPTSPDSFDNDYFKNL 262          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.937e-38
Identity = 92/213 (43.19%), Postives = 129/213 (60.56%), Query Frame = 3
Query:   36 IHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQ-TLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYY-NLL 668
            + + P + AS LR+HFHDCF  GCDASVLL      E+NA PN  +L G  F  I+ +K  +E  C   VSCADILT+  RDS+VA GGPSW VP GRRD   +  S A +++P P+++ + L+ +F  + L+  D+V LSGAHTIG + C++  +R+Y        D  +++ +A +LKA  C     NT L  +D  +   FD +YY NLL
Sbjct:   49 VSSDPRMGASLLRLHFHDCF--GCDASVLLTGM---EQNAGPNVGSLRG--FGVIDNIKTQLESVCKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSTTASASLANSDLPGPSSSRSQLEAAFLKKNLNTVDMVALSGAHTIGKAQCSNFRTRIYG------GDTNINTAFATSLKA-NCPQSGGNTNLANLDTMTPNAFDNAYYTNLL 247          
The following BLAST results are available for this feature:
BLAST of CN181812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PERX_TOBAC3.531e-4039.41Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER40_ARATH4.612e-4041.07Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PERA2_ARMRU6.023e-4038.36Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER18_ARATH6.023e-4044.44Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER50_ARATH1.027e-3939.56Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PERX_NICSY1.752e-3941.01Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]
PER7_ARATH2.989e-3941.74Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 ... [more]
PER48_ARATH5.099e-3939.90Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER58_ARATH1.136e-3840.27Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER1_WHEAT1.937e-3843.19Peroxidase OS=Triticum aestivum PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001I06_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001I06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181812 ID=CN181812; Name=CN181812; organism=Citrus sinensis; type=EST; length=668bp
GAGGAAAGATTGTGTTAGACTATGTTAACAAACACATCCACAATGCCCCC
TCATTAGCCGCATCTTTCCTCAGAATGCATTTCCATGATTGCTTTGTCAG
GGGCTGTGATGCATCCGTGCTGCTAAACTCAACAGGCAATCCTGAAAGAA
ATGCCGTTCCAAATCAAACATTGACAGGCGCAACCTTTGATTTCATCGAA
AGAGTGAAGAGACTAGTCGAAGATGCATGCCCCGGCATAGTTTCTTGTGC
AGATATTCTTACGTTAGTTACAAGAGACTCTATTGTAGCCACAGGAGGTC
CTTCCTGGAAAGTTCCAACCGGACGAAGAGACGGGCGAGTCTCCATTCGT
TCAGAAGCCCAAAACAATATCCCAGCTCCTACTAACAACTTCACCCTTCT
TCAACGAAGTTTTGCTAATCAAGGACTTGATTTGAAGGACCTGGTTCTGC
TCTCAGGTGCACACACAATCGGGGTCTCCCACTGCACTTCAGTTTCAAGC
CGGCTGTACAATTTCACAGGAGTGGGTGACCAAGACCCTGCTCTTGACAG
TGAATATGCAGCAAATCTCAAGGCAAGAAAGTGCAGAACTCCAAATGATA
ACACTACATTACTTGAAATGGACCCTGGTAGCCGCAAGACATTTGATCTT
AGCTACTACAATCTTTTG
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