CN181812

Overview
NameCN181812
Unique NameCN181812
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1894 contig Csv1_Contig1894:149..816. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.530e-38
Identity = 91/207 (43.96%), Postives = 128/207 (61.84%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNST-GNP-ERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQN-NIPAPTNNFTLLQRSFANQGLDLKDLV-LLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLE 617
            IV   V     +  S+ A+FLRM FHDCFVRGCDAS+L++   G P E++  PN ++ G  ++ I+  KR +E ACP  VSCADI+TL TRDS+   GGP + VPTGRRDG   +RS   + N+P PT   +   + FA QG++  D+V L+ G H++GV+HC+    RL         D A++    ++L+ RKC +PND TT L+
Sbjct:   37 IVASVVANRFRSDKSITAAFLRMQFHDCFVRGCDASLLIDPRPGRPSEKSTGPNASVRG--YEIIDEAKRQLEAACPRTVSCADIVTLATRDSVALAGGPRFSVPTGRRDG---LRSNPNDVNLPGPTIPVSASIQLFAAQGMNTNDMVTLIGGGHSVGVAHCSLFQDRL--------SDRAMEPSLKSSLR-RKCSSPNDPTTFLD 229          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.316e-38
Identity = 92/213 (43.19%), Postives = 124/213 (58.22%), Query Frame = 3
Query:   54 LAASFLRMHFHDCFVRGCDASVLLNSTGN--PERNAVPNQ-TLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTP----NDNTTLLEMDPGSRKTFDLSYY-NLL 668
            + AS LR+HFHDCFV+GCD SVLLN T     E+ A PN  ++ G  F  ++ +K  VE  CPG+VSCADIL +  RDS+VA GGPSW+V  GRRD   +  + A +++PAP+ +   L  +FA + L   DLV LSGAHTIG++ C +  + +YN T V           AA    R+   P    N +  L  +D  +   FD +YY NLL
Sbjct:   57 MGASLLRLHFHDCFVQGCDGSVLLNDTATFTGEQTANPNVGSIRG--FGVVDNIKAQVEAVCPGVVSCADILAVAARDSVVALGGPSWRVLLGRRDSTTASLALANSDLPAPSLDLANLTAAFAKKRLSRTDLVALSGAHTIGLAQCKNFRAHIYNDTNVN----------AAFATLRRANCPAAAGNGDGNLAPLDTATPTAFDNAYYTNLL 257          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.316e-38
Identity = 96/214 (44.86%), Postives = 125/214 (58.41%), Query Frame = 3
Query:   54 LAASFLRMHFHDCFVRGCDASVLLNST---GNPERNAVPNQ-TLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFT---GVGDQDPALDSEYAANLKARKCRTPNDNTTLL--EMDPGSRKTFDLSYYNLL 668
            +AA  +R+HFHDCFVRGCD SVLL      G  ER+A+PN  +L G  FD I+  K  VE +CP  VSCADI+    RDSI  TG  S++VP GRRDGRVS  +E   ++P PT+    L   F  + L ++D+V+LSGAHT+G S C S   R++N +        D  L   YA  L+A  C +    TT +   MDPG+    D +YY LL
Sbjct:   65 IAAGLIRLHFHDCFVRGCDGSVLLTVNPGGGQTERDALPNNPSLRG--FDVIDAAKTAVEQSCPRTVSCADIVAFAARDSISLTGSVSYQVPAGRRDGRVSNATETV-DLPPPTSTAQSLTDLFKAKELSVEDMVVLSGAHTVGRSFCASFFKRVWNTSTNPATAIVDAGLSPSYAQLLRA-LCPSNTTQTTPITTAMDPGTPNVLDNNYYKLL 274          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.637e-38
Identity = 91/210 (43.33%), Postives = 131/210 (62.38%), Query Frame = 3
Query:   48 PSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQ-TLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQ-GLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRT-PNDNTTLLEMDPGSRKTFDLSYYNLL 668
            P + AS LR+HFHDCFV+GCDASVLL+     E+NA+PN  +L G  F  I+ +K  +E  C   VSCADILT+  RDS+VA GGPSW VP GRRD   +  +EA  ++P   ++   L+ +F  + GL+  D+V LSGAHTIG + C++  +R+Y        D  +++ YAA+L+A   +T  + + +L  +D  +  TFD +YY  L
Sbjct:   51 PRMGASLLRLHFHDCFVQGCDASVLLSGM---EQNAIPNAGSLRG--FGVIDSIKTQIEAICKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSIDANENEANTDLPGFNSSRAELEAAFLKKGGLNTVDMVALSGAHTIGQAQCSTFRARIYG------GDTNINAAYAASLRANCPQTVGSGDGSLANLDTTTANTFDNAYYTNL 249          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.256e-37
Identity = 89/225 (39.56%), Postives = 122/225 (54.22%), Query Frame = 3
Query:    6 KIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNST--GNPERNAVPNQTLTGATFDFIERVKRLVE--DACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            +IV   V + I        + LR+ FHDCFV GCDASV++ ST     E++   N +L G  FD + + K+ ++   +C   VSCADIL L TRD +VA  GPS+ V  GR DG VS  +    N+P P N  T L + FA   L  +D++ LS AHT+G +HC  V +R+YNF      DP L+  YA  L+   C    D    + MDP + + FD  Y+  L
Sbjct:   41 QIVKKVVQEKIKQTFVTIPATLRLFFHDCFVNGCDASVMIQSTPTNKAEKDHPDNISLAGDGFDVVIKAKKALDAIPSCKNKVSCADILALATRDVVVAAKGPSYAVELGRFDGLVSTAASVNGNLPGPNNKVTELNKLFAKNKLTQEDMIALSAAHTLGFAHCGKVFNRIYNFNLTHAVDPTLNKAYAKELQL-ACPKTVDPRIAINMDPTTPRQFDNIYFKNL 264          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.142e-37
Identity = 90/224 (40.18%), Postives = 125/224 (55.80%), Query Frame = 3
Query:    6 KIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLL--NSTGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLE-MDPGSRKTFDLSYYNLL 668
            KIV + V       P+ AA  LR+ FHDCF+ GCDASVL+  NS    ER+   N++L G  FD + R+K  +E +CPG+VSCADIL   TRD +   GGP ++V  GR+DG  S   + + N+P    +   +   F   G  LK+LV LSG HTIG SHC   S+R++        DP L++++A  LK   C+    N T+   +DP +   FD  Y+  L
Sbjct:   40 KIVRETVTPKQGQQPTTAAGTLRLFFHDCFMEGCDASVLIATNSFNKAERDDDLNESLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPFYEVKLGRKDGFESKAHKVKGNLPLANQSVPDMLSIFKKNGFTLKELVALSGGHTIGFSHCKEFSNRIF-----PKVDPELNAKFAGVLK-DLCKNFETNKTMAAFLDPVTPGKFDNMYFKNL 257          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.798e-37
Identity = 90/227 (39.65%), Postives = 129/227 (56.83%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQR--SFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLY-----NFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            +V + V     + P++    LR+ FHDCFV+GCDASVL+   GN    + P     G  F  I+  K  +E+ CP  VSCADI+ L  RD++ A GGP  ++PTGRRDG+ S+ +  + NI     +FTL Q   +F+++GL ++DLV+LSGAHTIG SHC + + R       NF  +   D +LD+ YA  L   KC +   ++  +  DP +   FD  YY  L
Sbjct:   44 LVRNTVRSATSSDPTIPGKLLRLFFHDCFVQGCDASVLIQ--GNSTEKSDPGNASLGG-FSVIDTAKNAIENLCPATVSCADIVALAARDAVEAAGGPVVEIPTGRRDGKESMAANVRPNI--IDTDFTLDQMIDAFSSKGLSIQDLVVLSGAHTIGASHCNAFNGRFQRDSKGNFEVI---DASLDNSYAETL-MNKCSSSESSSLTVSNDPETSAVFDNQYYRNL 261          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.813e-36
Identity = 88/223 (39.46%), Postives = 133/223 (59.64%), Query Frame = 3
Query:    6 KIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNST--GNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            +IV + VN  +   P+LAA  +RM FHDCF+ GCDAS+LL+ST     E+++  N +L G  ++ I+  K  +E+ CPG+VSCADI+ +  RD++   GGP + +P GR DG+ S + E   N+P+P  N + L ++F  +G   +D+V LSGAHT+GV+ C+S  +RL         D +LDS +A  L   K  +  DN    +    +R  FD +Y+N L
Sbjct:   40 QIVKNSVNNALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTAEKDSPANLSLRG--YEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGKRS-KIEDTRNLPSPFLNASQLIQTFGQRGFTPQDVVALSGAHTLGVARCSSFKARL------TVPDSSLDSTFANTLS--KTCSAGDNAE--QPFDATRNDFDNAYFNAL 249          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER5_ARATH (Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 3.093e-36
Identity = 87/209 (41.63%), Postives = 122/209 (58.37%), Query Frame = 3
Query:   54 LAASFLRMHFHDCFVRGCDASVLLNSTGN--PERNAVPN-QTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQN-NIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            +AAS +RMHFHDCFV GCDAS+LL  T     ER+A+PN +++ G  F+ I++ K  VE  CPGIVSCADI+ +  RD+    GGP W V  GRRD   + ++ A +  +P   +    L   F+ +GL+ +DLV LSGAHTIG S C     RLY      +    +D+ +A+  K R+C T   +  L  +D  +  +FD +YY  L
Sbjct:   56 MAASLIRMHFHDCFVHGCDASILLEGTSTIESERDALPNFKSVRG--FEVIDKAKSEVEKVCPGIVSCADIIAVAARDASEYVGGPKWAVKVGRRDSTAAFKALANSGELPGFKDTLDQLSGLFSKKGLNTRDLVALSGAHTIGQSQCFLFRDRLY------ENSSDIDAGFASTRK-RRCPTVGGDGNLAALDLVTPNSFDNNYYKNL 255          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER61_ARATH (Probable peroxidase 61 OS=Arabidopsis thaliana GN=PER61 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.276e-36
Identity = 86/217 (39.63%), Postives = 125/217 (57.60%), Query Frame = 3
Query:   24 VNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLK----ARKCRTPNDNTTLLEMDPGSRKTFDLSYYN 662
            V K   N  S+A   LR+ + DC V GCD S+LL    N ER A  N+ L G  F  I+++K+++E  CPG+VSCADIL L TRD++   G PS+ V TGRRDG  ++ ++A  ++P+P+ +       F ++GLD+ D+  L GAH++G +HC+ V  RLYNF   G  DP +++   + L+     R  +   D    L  D GS   F  SYY+
Sbjct:   57 VEKFYKNDSSIAPKLLRLLYSDCMVNGCDGSILLQGP-NSERTAPQNRGLGG--FVIIDKIKQVLESRCPGVVSCADILNLATRDAVHMAGAPSYPVFTGRRDGG-TLNADAV-DLPSPSISVDESLAYFKSKGLDVLDMTTLLGAHSMGKTHCSYVVDRLYNFKNTGKPDPTMNTTLVSQLRYLCPPRTQKGQTDPLVYLNPDSGSSNRFTSSYYS 268          
The following BLAST results are available for this feature:
BLAST of CN181812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER44_ARATH2.530e-3843.96Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER70_MAIZE4.316e-3843.19Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]
PER1_MAIZE4.316e-3844.86Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PER1_HORVU5.637e-3843.33Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PER73_ARATH1.256e-3739.56Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PER41_ARATH2.142e-3740.18Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]
PER46_ARATH2.798e-3739.65Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER47_ARATH1.813e-3639.46Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER5_ARATH3.093e-3641.63Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 ... [more]
PER61_ARATH5.276e-3639.63Probable peroxidase 61 OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001I06_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001I06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181812 ID=CN181812; Name=CN181812; organism=Citrus sinensis; type=EST; length=668bp
GAGGAAAGATTGTGTTAGACTATGTTAACAAACACATCCACAATGCCCCC
TCATTAGCCGCATCTTTCCTCAGAATGCATTTCCATGATTGCTTTGTCAG
GGGCTGTGATGCATCCGTGCTGCTAAACTCAACAGGCAATCCTGAAAGAA
ATGCCGTTCCAAATCAAACATTGACAGGCGCAACCTTTGATTTCATCGAA
AGAGTGAAGAGACTAGTCGAAGATGCATGCCCCGGCATAGTTTCTTGTGC
AGATATTCTTACGTTAGTTACAAGAGACTCTATTGTAGCCACAGGAGGTC
CTTCCTGGAAAGTTCCAACCGGACGAAGAGACGGGCGAGTCTCCATTCGT
TCAGAAGCCCAAAACAATATCCCAGCTCCTACTAACAACTTCACCCTTCT
TCAACGAAGTTTTGCTAATCAAGGACTTGATTTGAAGGACCTGGTTCTGC
TCTCAGGTGCACACACAATCGGGGTCTCCCACTGCACTTCAGTTTCAAGC
CGGCTGTACAATTTCACAGGAGTGGGTGACCAAGACCCTGCTCTTGACAG
TGAATATGCAGCAAATCTCAAGGCAAGAAAGTGCAGAACTCCAAATGATA
ACACTACATTACTTGAAATGGACCCTGGTAGCCGCAAGACATTTGATCTT
AGCTACTACAATCTTTTG
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