CN181812

Overview
NameCN181812
Unique NameCN181812
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1894 contig Csv1_Contig1894:149..816. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.276e-36
Identity = 91/222 (40.99%), Postives = 120/222 (54.05%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLL-NSTGNPERNAVP-NQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            IV   V + + +     A  +R+HFHDCFV GCD SVLL +  G     A P N  +TG  F+ +  +K  VE ACPG+VSCADIL + +  S+   GGP W+V  GRRD R +    A + +P+P  N T L+R F    LD  DLV LSGAHT G S C     RL     V + D  L+  YA  L+ + C +  D  T + +DP +   FD +YY  L
Sbjct:   13 IVRRVVQQALVSDERAGARLIRLHFHDCFVNGCDGSVLLEDQPGVVSELAAPGNANITG--FNIVNNIKAAVEKACPGVVSCADILAIASVGSVNLAGGPCWEVQLGRRDSRRANLQGAIDGLPSPFENVTQLKRKFDRVDLDSTDLVALSGAHTFGKSRCQFFDRRL----NVSNPDSTLNPRYAQQLR-QACSSGRD--TFVNLDPTTPNKFDKNYYTNL 225          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.891e-36
Identity = 82/227 (36.12%), Postives = 126/227 (55.51%), Query Frame = 3
Query:   12 VLDYVNKH----IHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGN--PERNAVPN-QTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLY-NFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            V D + K     +   P  AA  +R+HFHDCFV+GCD SVLL+ T     E+ A PN  +L G  +  ++R+K ++E  CPG+VSCAD+LT+  RD+ +  GGP W VP GR+D + +    A  N+P P      +   F +QGL ++D+V L GAHTIG + C +  SR+Y +F      +P  ++  A+  +     +   ++ +  +D  +   FD S Y+ L
Sbjct:   42 VFDVIKKEMECIVKEDPRNAAIIIRLHFHDCFVQGCDGSVLLDETETLQGEKKASPNINSLKG--YKIVDRIKNIIESECPGVVSCADLLTIGARDATILVGGPYWDVPVGRKDSKTASYELATTNLPTPEEGLISIIAKFYSQGLSVEDMVALIGAHTIGKAQCRNFRSRIYGDFQVTSALNPVSETYLASLREICPASSGEGDSNVTAIDNVTPNLFDNSIYHTL 266          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.535e-35
Identity = 88/223 (39.46%), Postives = 116/223 (52.02%), Query Frame = 3
Query:    6 KIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLL--NSTGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            KIV + V       P+ AA  LR+ FHDCF+ GCDASVL+  NS    ER+   N +L G  FD + R+K  +E +CPG+VSCADIL   TRD +   GGP + V  GR+DG  S   + + N+P        +   F   G  L+++V LSGAHTIG SHC   S RLY        D  ++  +AA LK        D+T     D  +   FD  Y+  L
Sbjct:   47 KIVREAVTTKQVQQPTTAAGTLRLFFHDCFLEGCDASVLIATNSFNKAERDDDLNDSLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPYFDVKLGRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFSLREMVALSGAHTIGFSHCKEFSDRLYG----SRADKEINPRFAAALKDLCKNHTVDDTIAAFNDVMTPGKFDNMYFKNL 265          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.535e-35
Identity = 77/201 (38.31%), Postives = 114/201 (56.72%), Query Frame = 3
Query:   60 ASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGA-TFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYY 659
            AS +R  FHDCFV GCDAS+LL+ T N     +    +    +F+ ++ +K  +E ACP  VSCADI+ +  RD++  TGGP W+V  GR+D   + + ++ + +P+P  N T L   F    L +KD+V LSG+H+IG   C S+  RLYN +G G  DPAL+  Y   L  + C    D     ++D  + + FD  Y+
Sbjct:   55 ASVMRFQFHDCFVNGCDASLLLDDTPNMLGEKLSLSNIDSLRSFEVVDDIKEALEKACPATVSCADIVIMAARDAVALTGGPDWEVKLGRKDSLTASQQDSDDIMPSPRANATFLIDLFERFNLSVKDMVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPALEPSYRKKLD-KLCPLGGDENVTGDLD-ATPQVFDNQYF 253          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.005e-35
Identity = 86/221 (38.91%), Postives = 129/221 (58.37%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSI-VATGGPS-WKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKC--RTPNDNTTLLEMDPGSRKTFDLSYY 659
            IV   V +      S+A + +R++FHDCF  GCDAS+LL+ + N E+ A PN ++ G  ++ I+ +K  VE  C  +VSCADI+ L TRD + +A+GG + +++PTGR DG++S  S    ++P+P          F  + L L D+VLL G HTIGV+HC+ +  RLYNF      DP++D +    L A KC   +  D    L+ +  S  T D+S+Y
Sbjct:   43 IVSKVVGEAFIKDSSIAPAMIRLYFHDCFSNGCDASLLLDGS-NSEKKASPNLSVRG--YEVIDDIKSAVEKECDRVVSCADIIALATRDLVTLASGGKTRYEIPTGRLDGKIS--SALLVDLPSPKMTVAETAAKFDQRKLSLNDMVLLLGGHTIGVTHCSFIMDRLYNFQNTQKPDPSMDPKLVEELSA-KCPKSSSTDGIISLDQNATSSNTMDVSFY 257          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.420e-35
Identity = 83/208 (39.90%), Postives = 122/208 (58.65%), Query Frame = 3
Query:   54 LAASFLRMHFHDCFVRGCDASVLLNSTGN--PERNAVPN-QTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            +AAS +R+HFHDCFV GCDASV+L +T     ER+++ N Q+  G  F+ I++ K  VE  CPG+VSCADI+ +  RD+    GGP + V  GRRD   + R+ A  ++P    +   L   F  +GL+ +DLV LSGAHT+G + C +   RLY      D    +D+ +++  K R+C     +TTL  +D  +  +FD +YY  L
Sbjct:   51 MAASLIRLHFHDCFVNGCDASVMLVATPTMESERDSLANFQSARG--FEVIDQAKSAVESVCPGVVSCADIIAVAARDASEYVGGPRYDVKVGRRDSTNAFRAIADRDLPNFRASLNDLSELFLRKGLNTRDLVALSGAHTLGQAQCLTFKGRLY------DNSSDIDAGFSSTRK-RRCPVNGGDTTLAPLDQVTPNSFDNNYYRNL 249          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.467e-35
Identity = 80/221 (36.20%), Postives = 118/221 (53.39%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNP----ERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYY 659
            +V    ++     P  A + +R+ FHDCFV GCD S+L+ +        ER A  N+ L    FD I + K LVE  CP +VSC+DIL +  RD I   GGP ++V  GR DG+ S       NIP   +    L + FA++GL +++LV+LSG+HTIG +HC +   RLY++ G    DP+LD      L+     +   +  +L +D  +   FD  Y+
Sbjct:   57 LVGSVTSQRFKEVPISAPATIRLFFHDCFVEGCDGSILIETKKGSKKLAEREAYENKELREEGFDSIIKAKALVESHCPSLVSCSDILAIAARDFIHLAGGPYYQVKKGRWDGKRSTAKNVPPNIPRSNSTVDQLIKLFASKGLTVEELVVLSGSHTIGFAHCKNFLGRLYDYKGTKRPDPSLDQRLLKELRMSCPFSGGSSGVVLPLDATTPFVFDNGYF 277          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 5.834e-35
Identity = 91/215 (42.33%), Postives = 122/215 (56.74%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNP-ERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLS-GAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFD 647
            IV D V + + N P  AA  LR+ FHDCFV GCD S+L+   GN  ER A  N  + G  FD I+  K  +E  CPG+VSCADI+ L  RD+I    GP ++VPTGRRDG ++    A+ N+P   ++   L+  F  +GL  +DLVLLS GAHTIG + C  V  RL        QDP ++ E+   L++ KC    D    + +D  S+  FD
Sbjct:   39 IVRDVVQQAVTNDPGKAAVLLRLQFHDCFVEGCDGSILIKHGGNDDERFAAGNAGVAG--FDVIDEAKSELERFCPGVVSCADIVALAARDAIAEAKGPFYEVPTGRRDGLIANVDHAK-NLPDVQDSINTLKSKFREKGLSDQDLVLLSAGAHTIGTTACFFVIPRL------DAQDPTINPEFFQILRS-KCPQGGDVNVRIPLDWDSQFVFD 243          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.300e-34
Identity = 85/216 (39.35%), Postives = 120/216 (55.56%), Query Frame = 3
Query:   27 NKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTG--NPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            NK I N P+ AA+ +R+ FHDCF  GCDASVL++ST     ER++  N +L G  FD I R K  +E ACP  VSC+DI+++ TRD ++  GGP + V  GRRD R S  S   + +P P+   + + + F ++G  ++++V LSGAH+IG SHC     R      VG  +   +  +A  LK      P D T  +  D  +   FD  YY  L
Sbjct:   43 NKQITN-PTTAAAVIRLFFHDCFPNGCDASVLISSTAFNTAERDSSINLSLPGDGFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGPYYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQEMVALSGAHSIGFSHCKEFVGR------VGRNNTGYNPRFAVALKKACANYPKDPTISVFNDIMTPNKFDNMYYQNL 251          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER26_ARATH (Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.300e-34
Identity = 83/211 (39.34%), Postives = 121/211 (57.35%), Query Frame = 3
Query:   42 NAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALD----SEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYN 662
            N  S+A   LR+ + DCFV GCDASVLL    N E+ A  N+ L G  F  I+++K ++E  CPG+VSCADIL L TRD++   G PS+ V TGRRDG  S +     ++P+P+ ++      F ++GL++ D+  L G+H++G +HC+ V  RLYN+   G   P ++    SE A     R  +   D    L  D GS  +F  S+Y+
Sbjct:   63 NDKSIAPKLLRLLYSDCFVSGCDASVLLEGP-NSEKMAPQNRGLGG--FVLIDKIKIVLEQRCPGVVSCADILNLATRDAVHLAGAPSYPVFTGRRDGLTSDKQTV--DLPSPSISWDQAMSYFKSRGLNVLDMATLLGSHSMGRTHCSYVVDRLYNYNKTGKPSPTMNKYFLSEMAKQCPPRTRKGQTDPLVYLNPDSGSNHSFTSSFYS 268          
The following BLAST results are available for this feature:
BLAST of CN181812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER2_CUCSA5.276e-3640.99Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV... [more]
PER11_ARATH6.891e-3636.12Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PER65_ARATH1.535e-3539.46Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]
PER17_ARATH1.535e-3538.31Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PER60_ARATH2.005e-3538.91Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]
PER4_ARATH3.420e-3539.90Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PER19_ARATH4.467e-3536.20Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]
PER13_ARATH5.834e-3542.33Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]
PER31_ARATH1.300e-3439.35Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER26_ARATH1.300e-3439.34Probable peroxidase 26 OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001I06_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001I06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181812 ID=CN181812; Name=CN181812; organism=Citrus sinensis; type=EST; length=668bp
GAGGAAAGATTGTGTTAGACTATGTTAACAAACACATCCACAATGCCCCC
TCATTAGCCGCATCTTTCCTCAGAATGCATTTCCATGATTGCTTTGTCAG
GGGCTGTGATGCATCCGTGCTGCTAAACTCAACAGGCAATCCTGAAAGAA
ATGCCGTTCCAAATCAAACATTGACAGGCGCAACCTTTGATTTCATCGAA
AGAGTGAAGAGACTAGTCGAAGATGCATGCCCCGGCATAGTTTCTTGTGC
AGATATTCTTACGTTAGTTACAAGAGACTCTATTGTAGCCACAGGAGGTC
CTTCCTGGAAAGTTCCAACCGGACGAAGAGACGGGCGAGTCTCCATTCGT
TCAGAAGCCCAAAACAATATCCCAGCTCCTACTAACAACTTCACCCTTCT
TCAACGAAGTTTTGCTAATCAAGGACTTGATTTGAAGGACCTGGTTCTGC
TCTCAGGTGCACACACAATCGGGGTCTCCCACTGCACTTCAGTTTCAAGC
CGGCTGTACAATTTCACAGGAGTGGGTGACCAAGACCCTGCTCTTGACAG
TGAATATGCAGCAAATCTCAAGGCAAGAAAGTGCAGAACTCCAAATGATA
ACACTACATTACTTGAAATGGACCCTGGTAGCCGCAAGACATTTGATCTT
AGCTACTACAATCTTTTG
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