CN181808
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181808 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.969e-52 Identity = 73/131 (55.73%), Postives = 82/131 (62.60%), Query Frame = 1 Query: 307 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAND 687 K + F AQT HETTGGW AP G +AWGYCF E SDYC P+ +PC +YYGRGPIQLS NYNY NPDL+ATD + FK+AIWFWMTAQPPKPS H VI +W PS D Sbjct: 77 KREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLA--NPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPSGAD 205 HSP 2 Score: 77.0258 bits (188), Expect = 1.969e-52 Identity = 34/59 (57.63%), Postives = 44/59 (74.58%), Query Frame = 3 Query: 150 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAF 326 + I+SR FD +L +RND C A+GFYTYDAF+ AA AFPGFG +G+ +KRE+AAF Sbjct: 25 VSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAF 83
BLAST of CN181808 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 148.673 bits (374), Expect = 4.353e-52 Identity = 74/131 (56.49%), Postives = 84/131 (64.12%), Query Frame = 1 Query: 307 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAND 687 K + F AQT HETTGGW AP G +AWGYCF E S+YC P+ +PC GK YYGRGPIQLS NYNY NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VI +W PS D Sbjct: 129 KREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTD 257 HSP 2 Score: 75.8702 bits (185), Expect = 4.353e-52 Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 3 Query: 150 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAF 326 + I+SR +FD +L +RND C A+GFYTYDAF+ AA AF GFG +G RKRE+AAF Sbjct: 77 VSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAF 135
BLAST of CN181808 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 9.659e-52 Identity = 71/125 (56.80%), Postives = 81/125 (64.80%), Query Frame = 1 Query: 325 FFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAND 687 F AQT HETTGGW AP G +AWGYCF E +DYC P+ +PC +YYGRGPIQLS NYNY NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VI +W PS D Sbjct: 83 FLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGAD 205 HSP 2 Score: 75.485 bits (184), Expect = 9.659e-52 Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 3 Query: 150 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAF 326 + IIS FD +L +RND C A+GFYTYDAF+ AA AFPGFG +G+ RKR++AAF Sbjct: 25 VSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAF 83
BLAST of CN181808 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.047e-50 Identity = 69/133 (51.88%), Postives = 83/133 (62.41%), Query Frame = 1 Query: 307 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPP--SDYC--DPNYPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAND 687 K + F AQT HETTGGW AP G Y+WGYCF E + SDYC +PC KYYGRGPIQ+S+NYNY +NPDL+A+D +SFK+A WFWMT Q PKPSCH V+ +W P+ ND Sbjct: 131 KREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNY--GPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPNGND 261 HSP 2 Score: 77.7962 bits (190), Expect = 1.047e-50 Identity = 33/59 (55.93%), Postives = 43/59 (72.88%), Query Frame = 3 Query: 150 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAF 326 + I+SR +FD +L +RND CPA+ FYTYDAF+ AA AFP F +G+ RKRE+AAF Sbjct: 79 VASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAF 137
BLAST of CN181808 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 1.780e-50 Identity = 71/132 (53.79%), Postives = 86/132 (65.15%), Query Frame = 1 Query: 307 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSD-YCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAND 687 K + F AQT HETTGGWP AP G Y+WGYCF E + + YC+P +PC KYYGRGPIQ+++NYNY NNPDL+A+D +SFK+A WFWMT Q PKPSCH VI +W PSA+D Sbjct: 128 KREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNY--GPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADD 257 HSP 2 Score: 70.8626 bits (172), Expect = 1.780e-50 Identity = 31/59 (52.54%), Postives = 42/59 (71.19%), Query Frame = 3 Query: 150 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAF 326 + IIS +FD +L +RND+ C A+GFYTYDAF+ AA A+P F +G+ KRE+AAF Sbjct: 76 VASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAF 134
BLAST of CN181808 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.291e-49 Identity = 69/125 (55.20%), Postives = 80/125 (64.00%), Query Frame = 1 Query: 325 FFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYC--DPNYPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAND 687 F AQT HETTGGW AP G Y+WGYC+ E P DYC +PC KY+GRGPIQ+S+NYNY NNPDL+A D V+SFK+A+WFWMTAQ PKPS H+VI W PS D Sbjct: 63 FLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQWPCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLL--NNPDLVANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVAD 185 HSP 2 Score: 66.6254 bits (161), Expect = 7.291e-49 Identity = 28/59 (47.46%), Postives = 41/59 (69.49%), Query Frame = 3 Query: 150 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAF 326 + +IS+ +F+ +L +RND C A+GFYTY+AFI A + F FG +G+ R +EIAAF Sbjct: 5 ISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAF 63
BLAST of CN181808 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.614e-48 Identity = 65/121 (53.72%), Postives = 82/121 (67.77%), Query Frame = 1 Query: 325 FFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAND 687 FF QT HETTGGW AP G +AWGYC ++E++P DP YYGRGPIQL+ YNY NNPDL+++DPV++F++AIWFWMTAQ PKPSCH+VI ++W PS +D Sbjct: 84 FFGQTSHETTGGWATAPDGPFAWGYCRVNEITPS----DP------PYYGRGPIQLTHKYNYQLAGDALGLDLV--NNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDD 192 HSP 2 Score: 71.2478 bits (173), Expect = 1.614e-48 Identity = 33/60 (55.00%), Postives = 44/60 (73.33%), Query Frame = 3 Query: 150 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 329 +G II+R MF+ +L +R D+ C FYTYDAFI+AA FP FG +GN+ R+RE+AAFF Sbjct: 27 VGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFF 85
BLAST of CN181808 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.614e-48 Identity = 60/130 (46.15%), Postives = 73/130 (56.15%), Query Frame = 1 Query: 307 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNA 696 K++ FF QT HET GG G + GYCF+ ++ +YYGRGPIQL+ NY R NNPDL+ATDP++SFK+AIWFWMT Q KPSCH VII +W PS D A Sbjct: 79 KKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQSD-----------RYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAA 193 HSP 2 Score: 90.5077 bits (223), Expect = 1.614e-48 Identity = 37/59 (62.71%), Postives = 51/59 (86.44%), Query Frame = 3 Query: 153 GKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 329 G I++RE+F+ +L +RN++ CPA+GFYTYDAFI AA +FPGFG +G++T RK+EIAAFF Sbjct: 28 GSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFF 86
BLAST of CN181808 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.104e-48 Identity = 62/130 (47.69%), Postives = 76/130 (58.46%), Query Frame = 1 Query: 307 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNA 696 K++ FF QT HET GG G + GYCF+ ++ D D +YYGRGPIQL+ NY R NNPDL+ATDP++SF++AIWFWMTAQ KPSCH VII +W PS D A Sbjct: 79 KKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQI----DQSD-------RYYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAA 193 HSP 2 Score: 90.5077 bits (223), Expect = 2.104e-48 Identity = 37/59 (62.71%), Postives = 51/59 (86.44%), Query Frame = 3 Query: 153 GKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 329 G I++RE+F+ +L +RN++ CPA+GFYTYDAFI AA +FPGFG +G++T RK+EIAAFF Sbjct: 28 GSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFF 86
BLAST of CN181808 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 1.341e-47 Identity = 68/133 (51.13%), Postives = 81/133 (60.90%), Query Frame = 1 Query: 307 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPS--DYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAND 687 K + F AQT HETTGGW AP G YAWGYCF E + DYC + +PC KYYGRGPIQLS+N+NY +PDL+A+D +SF +A WFWMT Q PKPSCH V +W PSA+D Sbjct: 134 KREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNY--GPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADD 264 HSP 2 Score: 72.4034 bits (176), Expect = 1.341e-47 Identity = 33/60 (55.00%), Postives = 42/60 (70.00%), Query Frame = 3 Query: 150 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNET-MRKREIAAF 326 + I+SR +FD +L +RND CPA FYTYDAF+ AA AFPGF +G + KRE+AAF Sbjct: 81 VASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAF 140 The following BLAST results are available for this feature:
BLAST of CN181808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181808 ID=CN181808; Name=CN181808; organism=Citrus sinensis; type=EST; length=696bpback to top |