CN181808
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181808 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 1.808e-40 Identity = 50/130 (38.46%), Postives = 60/130 (46.15%), Query Frame = 1 Query: 307 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNA 696 K + F QT HET G WP A G +Y WGYC + NYNY C P+L+ TDP ++FK+A+WFWMT Q PKPSCH VI + W PSA D A Sbjct: 137 KREIAAFLGQTSHETNGWWPAAQGDQYDWGYCHM------------------------------NYNYGLCGDDLNLPLL--QEPELVETDPFIAFKTALWFWMTPQSPKPSCHAVITESWTPSAADSEA 234 HSP 2 Score: 88.1965 bits (217), Expect = 1.808e-40 Identity = 40/59 (67.80%), Postives = 48/59 (81.36%), Query Frame = 3 Query: 150 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAF 326 L II MFDD+L+YRND +CPA GFYTY+AFI AA+ FP FGN+G++ MRKREIAAF Sbjct: 85 LSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAF 143
BLAST of CN181808 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.499e-39 Identity = 84/148 (56.76%), Postives = 96/148 (64.86%), Query Frame = 1 Query: 262 KLFQALVTLEMKPCVKEKSLPFFAQTGHETTGG--WPDAPGGEYAWGYCFISEVSPPSDYC--DPNYPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAND 687 K F A T K + F AQT HETTGG W AP G Y WGYC+ E++P +DYC DPNYPC GK Y+GRGP+QL+WNYNY +C NNPDLLATDP +SFKSA WFWMT Q PKPSCH+VII W PS +D Sbjct: 109 KSFPAFATTGDDATRKREVAAFLAQTSHETTGGAGWA-APDGPYTWGYCYNRELNP-ADYCQWDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAIGVDLL--NNPDLLATDPTISFKSAFWFWMTPQSPKPSCHDVIIGAWSPSGSD 252 HSP 2 Score: 81.2629 bits (199), Expect = 5.558e-15 Identity = 36/59 (61.02%), Postives = 46/59 (77.97%), Query Frame = 3 Query: 150 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAF 326 L +I+RE FD +L +RND CPARGFYTYDAFI AA++FP F +G++ RKRE+AAF Sbjct: 72 LDSLITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAF 130
BLAST of CN181808 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.467e-36 Identity = 55/132 (41.67%), Postives = 77/132 (58.33%), Query Frame = 1 Query: 307 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQ-PPKPSCHEVIIDEWKPSAND 687 K + F AQT H T+GG Y+WGYC+ SD+C PN +PC GK Y+ RGP+Q+++NYNY NP+L+ATDP ++FK+A+W WMTA+ P +PS H V+ +W P+ D Sbjct: 149 KREVAAFLAQTSHATSGG-------PYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLL--GNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPAD 271 HSP 2 Score: 67.0106 bits (162), Expect = 2.467e-36 Identity = 28/59 (47.46%), Postives = 41/59 (69.49%), Query Frame = 3 Query: 150 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAF 326 + +++ + F+ +L +R+D CPARGFY Y AF+ AA AFP F +G+ RKRE+AAF Sbjct: 97 VASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAF 155
BLAST of CN181808 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.467e-36 Identity = 55/132 (41.67%), Postives = 77/132 (58.33%), Query Frame = 1 Query: 307 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQ-PPKPSCHEVIIDEWKPSAND 687 K + F AQT H T+GG Y+WGYC+ SD+C PN +PC GK Y+ RGP+Q+++NYNY NP+L+ATDP ++FK+A+W WMTA+ P +PS H V+ +W P+ D Sbjct: 149 KREVAAFLAQTSHATSGG-------PYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLL--GNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPAD 271 HSP 2 Score: 67.0106 bits (162), Expect = 2.467e-36 Identity = 28/59 (47.46%), Postives = 41/59 (69.49%), Query Frame = 3 Query: 150 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAF 326 + +++ + F+ +L +R+D CPARGFY Y AF+ AA AFP F +G+ RKRE+AAF Sbjct: 97 VASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAF 155
BLAST of CN181808 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.331e-24 Identity = 61/142 (42.96%), Postives = 73/142 (51.41%), Query Frame = 1 Query: 262 KLFQALVTLEMKPCVKEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAND 687 K F A T K + F AQT HETTGGWP AP G Y E+ SDY +GRGPIQ+S+NYNY NPDL+ +D + FK+A+WFWMT Q PKPS H+VI W PS+ D Sbjct: 30 KSFPAFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGPY--------ELGSTSDY-----------FGRGPIQISYNYNYGAAGKAIGVDLL--RNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTD 150
BLAST of CN181808 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.887e-23 Identity = 41/109 (37.61%), Postives = 57/109 (52.29%), Query Frame = 1 Query: 307 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPS-DYCDPN---YPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFW 615 K + FFA HET +C+I E+ PS +YCD +PC GK YYGRGP+Q+SWN+NY +PD +A PVL+F++A+W+W Sbjct: 119 KREIAAFFAHANHETIK-------------FCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNY--GPAGQSIGFDGLGDPDAVARSPVLAFQTALWYW 212 HSP 2 Score: 55.4546 bits (132), Expect = 4.887e-23 Identity = 28/60 (46.67%), Postives = 39/60 (65.00%), Query Frame = 3 Query: 150 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 329 + I++ E F L+ + D+ C A+GFYT DAF+ AA +P FG +G+ KREIAAFF Sbjct: 68 VASIVTPEFFAALVA-QADDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFF 126
BLAST of CN181808 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 8.275e-23 Identity = 42/111 (37.84%), Postives = 58/111 (52.25%), Query Frame = 1 Query: 307 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN---YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTA 624 K + FFA HET +C+ISE++ + YCDP +PC KYYGRGP+Q+SWNYNY +P +A D V++FK+A+WFWM + Sbjct: 120 KREIAAFFAHATHETGH-------------FCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNY--GPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 215 HSP 2 Score: 47.7506 bits (112), Expect = 8.275e-23 Identity = 19/39 (48.72%), Postives = 26/39 (66.67%), Query Frame = 3 Query: 213 CPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 329 C + FYT AF+ A + +PGF + G++ KREIAAFF Sbjct: 89 CEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFF 127
BLAST of CN181808 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.370e-22 Identity = 41/109 (37.61%), Postives = 58/109 (53.21%), Query Frame = 1 Query: 307 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN---YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWM 618 K + FFA HET +C+ISE++ + YCD + +PC KYYGRGP+Q+SWNYNY +P+ +A D V++FK+A+WFWM Sbjct: 131 KREIAAFFAHVTHETGH-------------FCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNY--GPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 224 HSP 2 Score: 48.9062 bits (115), Expect = 2.370e-22 Identity = 21/39 (53.85%), Postives = 25/39 (64.10%), Query Frame = 3 Query: 213 CPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 329 C + FYT AF+ A A+PGF + G E KREIAAFF Sbjct: 100 CEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFF 138
BLAST of CN181808 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.152e-21 Identity = 38/104 (36.54%), Postives = 56/104 (53.85%), Query Frame = 1 Query: 307 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWM 618 K + +FA HET +A YC S+ P C+PN +Y+GRGP+QLSWNYNY+ N+PD++ DP++SFK+++WFW+ Sbjct: 97 KREIAAYFAHVTHETGHLCYIEERDGHANNYCQESQQYP----CNPNK----EYFGRGPMQLSWNYNYI--DAGKELHFDGLNDPDIVGRDPIISFKTSLWFWI 190 HSP 2 Score: 51.6026 bits (122), Expect = 1.152e-21 Identity = 24/57 (42.11%), Postives = 35/57 (61.40%), Query Frame = 3 Query: 159 IISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 329 I+++E +D + + CP + FYT F+EA A+PGFG + RKREIAA+F Sbjct: 49 IVTQEFWDGIAS-QAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYF 104
BLAST of CN181808 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.280e-21 Identity = 48/135 (35.56%), Postives = 69/135 (51.11%), Query Frame = 1 Query: 307 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPS-DYCDPN---YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVN 693 K + FFA HET C+I+E++ S DYCD N +PC+ KYYGRGP+Q+SWNYNY +PD +A DP +SFK+A+WFWM + H+V++ + + +N Sbjct: 138 KREIAAFFAHVTHETGH-------------MCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNY--GPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWMN------NVHQVMLQGFGATIRAIN 251 HSP 2 Score: 39.6614 bits (91), Expect = 4.280e-21 Identity = 19/53 (35.85%), Postives = 28/53 (52.83%), Query Frame = 3 Query: 171 EMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 329 E F + ++ + C + FYT +F+ AA ++ GF KREIAAFF Sbjct: 93 EAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFF 145 The following BLAST results are available for this feature:
BLAST of CN181808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181808 ID=CN181808; Name=CN181808; organism=Citrus sinensis; type=EST; length=696bpback to top |