CN181808
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181808 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 5.576e-21 Identity = 38/85 (44.71%), Postives = 54/85 (63.53%), Query Frame = 1 Query: 397 YCFISEVSPPS-DYCDPN---YPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPP 633 +C+I E++ S DYCD N YPC GK Y+GRGPIQLSWNYNY C P+L++++P ++F++ +WFWM + P Sbjct: 136 FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGAC--GQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRP 218 HSP 2 Score: 42.743 bits (99), Expect = 5.576e-21 Identity = 22/60 (36.67%), Postives = 33/60 (55.00%), Query Frame = 3 Query: 150 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 329 +G I+++ F+ ++ C + FYT D+FI AA FP F NS + +REIA F Sbjct: 72 VGSIVTQAFFNGIINQAGGG-CAGKNFYTRDSFINAANTFPNFANS----VTRREIATMF 126
BLAST of CN181808 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.242e-21 Identity = 46/113 (40.71%), Postives = 53/113 (46.90%), Query Frame = 1 Query: 307 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPP--SDYCDPN----YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMT 621 K + FFA HETT C I E YCD + YPC KYYGRGP+QLSWNYNY NP+ +ATD SFK+A+WFWMT Sbjct: 136 KREIAAFFAHISHETTN-------------LCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNY--ALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMT 233 HSP 2 Score: 45.8246 bits (107), Expect = 7.242e-21 Identity = 25/57 (43.86%), Postives = 33/57 (57.89%), Query Frame = 3 Query: 159 IISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 329 I+S+ FD ++ + CP + FYT AF+ A P FGN G+ KREIAAFF Sbjct: 90 IVSQAFFDGIIG-QAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFF 143
BLAST of CN181808 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 3.509e-20 Identity = 42/110 (38.18%), Postives = 59/110 (53.64%), Query Frame = 1 Query: 307 KEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPS-DYCDPN---YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWM 618 K + FFA HET C+I+E++ + DYCD + +PC+ KYYGRGP+Q+SWN+NY +PD +A DP +SFK+A+WFWM Sbjct: 135 KREIAAFFAHVTHETGH-------------MCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNY--GPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWM 229 HSP 2 Score: 42.3578 bits (98), Expect = 3.509e-20 Identity = 20/53 (37.74%), Postives = 30/53 (56.60%), Query Frame = 3 Query: 171 EMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 329 E F + ++ + C + FYT +F+ AA+++ GF N KREIAAFF Sbjct: 90 EAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFF 142
BLAST of CN181808 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.059e-18 Identity = 34/81 (41.98%), Postives = 46/81 (56.79%), Query Frame = 1 Query: 397 YCFISEVSPPS-DYCDPN----YPCRGK--YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWM 618 +C+I E+ S DYCD YPC Y+GRGPIQLSWN+NY P+ ++ D V+SFK+A+W+WM Sbjct: 136 FCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNY--GPAGSANNFDGLGAPETVSNDVVVSFKTALWYWM 214 HSP 2 Score: 43.8986 bits (102), Expect = 3.059e-18 Identity = 21/57 (36.84%), Postives = 34/57 (59.65%), Query Frame = 3 Query: 159 IISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 329 I++ + + +++ + D C + FYT DAF+ A ++ FG G+E KREIAA F Sbjct: 71 ILTADFLNGIID-QADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAF 126
BLAST of CN181808 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 2.972e-16 Identity = 48/136 (35.29%), Postives = 71/136 (52.21%), Query Frame = 1 Query: 268 FQALVTLEMKPCVKEKSLPFFAQTGHETTGGWPDAPGGEYAWGYCFISEVS-PPSDYC-DPNYPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIID 663 F A T+ K + F A T+G D +AWG C I+ + +D+C ++PC KY RGPIQL+ N+NY NPDL+ DP++SFK+A+WFWM+ KPSCH+++++ Sbjct: 167 FPAFGTIGDVATRKREVAAFLAHISQATSGERSDVEN-PHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNY--GLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIVLN 299 The following BLAST results are available for this feature:
BLAST of CN181808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181808 ID=CN181808; Name=CN181808; organism=Citrus sinensis; type=EST; length=696bpback to top |