CN181807

Overview
NameCN181807
Unique NameCN181807
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length647
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181807 vs. ExPASy Swiss-Prot
Match: DNJA1_BOVIN (DnaJ homolog subfamily A member 1 OS=Bos taurus GN=DNAJA1 PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 3.596e-26
Identity = 67/154 (43.51%), Postives = 95/154 (61.69%), Query Frame = -1
Query:  174 AKFKRKGEDLFYEHILSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDS--LTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQAHAQEAYEEDEDMPGGAQRVQC 629
            A F R+GEDLF    + L EALCGFQ  ++ LD R ++I S+PG++VK    K +  EGMP+Y+RP+ KG+L I F V FP++  L+PD++  LE +LP R     TD E+D+ E      V+ +    R++ +  EAYE+DE  P G   VQC
Sbjct:  249 AVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVEETD-EMDQVEL-----VDFDPNQERRRHYNGEAYEDDEHHPRGG--VQC 394          
BLAST of CN181807 vs. ExPASy Swiss-Prot
Match: DNAJ1_CERAE (DnaJ homolog subfamily A member 1 OS=Cercopithecus aethiops GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.697e-26
Identity = 66/154 (42.86%), Postives = 95/154 (61.69%), Query Frame = -1
Query:  174 AKFKRKGEDLFYEHILSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDS--LTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQAHAQEAYEEDEDMPGGAQRVQC 629
            A F R+GEDLF    + L EALCGFQ  ++ LD R ++I S+PG++VK    K +  EGMP+Y+RP+ KG+L I F + FP++  L+PD++  LE +LP R     TD E+D+ E      V+ +    R++ +  EAYE+DE  P G   VQC
Sbjct:  249 AVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKINFPENGFLSPDKLSLLEKLLPERKEVEETD-EMDQVEL-----VDFDPNQERRRHYNGEAYEDDEHHPRGG--VQC 394          
BLAST of CN181807 vs. ExPASy Swiss-Prot
Match: DNJA2_HUMAN (DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.046e-25
Identity = 63/155 (40.65%), Postives = 88/155 (56.77%), Query Frame = -1
Query:  165 FKRKGEDLFYEHILSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDS--LTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQAHAQEAYEEDEDMPGGAQRVQCAQQ 623
            F+R G DL   + + L EALCGFQF   HLDGRQ+++K  PG+V++P   + +  EGMP Y+ PF KG LYI F V+FP++  + PD++  LE +LPSRP       E +E E             +R++A+   + EE     G    VQCA Q
Sbjct:  260 FQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNIIGETEEVELQEFDSTRGSGGGQRREAYNDSSDEESSSHHGPG--VQCAHQ 412          
BLAST of CN181807 vs. ExPASy Swiss-Prot
Match: DNJA2_BOVIN (DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.331e-25
Identity = 62/155 (40.00%), Postives = 88/155 (56.77%), Query Frame = -1
Query:  165 FKRKGEDLFYEHILSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDS--LTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQAHAQEAYEEDEDMPGGAQRVQCAQQ 623
            F+R G DL   + + L EALCGFQF   HLDGRQ+++K  PG+V++P   + +  EGMP Y+ PF KG LYI F V+FP++  + PD++  LE +LPSRP       + +E E             +R++A+   + EE     G    VQCA Q
Sbjct:  260 FQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNIIGDTEEVELQEFDSTRGSGGGQRREAYNDSSDEESSSHHGPG--VQCAHQ 412          
BLAST of CN181807 vs. ExPASy Swiss-Prot
Match: DNJA2_RAT (DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.976e-25
Identity = 62/155 (40.00%), Postives = 87/155 (56.13%), Query Frame = -1
Query:  165 FKRKGEDLFYEHILSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDS--LTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQAHAQEAYEEDEDMPGGAQRVQCAQQ 623
            F+R G DL   + + L EALCGFQF   HLD RQ+++K  PG+V++P   + +  EGMP Y+ PF KG LYI F V+FP++  + PD++  LE +LPSRP       E +E E             +R++A+   + EE     G    VQCA Q
Sbjct:  260 FQRDGNDLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNVIGETEEVELQEFDSTRGSGGGQRREAYNDSSDEESSSHHGPG--VQCAHQ 412          
BLAST of CN181807 vs. ExPASy Swiss-Prot
Match: DNJA2_MOUSE (DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.976e-25
Identity = 62/155 (40.00%), Postives = 87/155 (56.13%), Query Frame = -1
Query:  165 FKRKGEDLFYEHILSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDS--LTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQAHAQEAYEEDEDMPGGAQRVQCAQQ 623
            F+R G DL   + + L EALCGFQF   HLD RQ+++K  PG+V++P   + +  EGMP Y+ PF KG LYI F V+FP++  + PD++  LE +LPSRP       E +E E             +R++A+   + EE     G    VQCA Q
Sbjct:  260 FQRDGNDLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNVIGETEEVELQEFDSTRGSGGGQRREAYNDSSDEESSSHHGPG--VQCAHQ 412          
BLAST of CN181807 vs. ExPASy Swiss-Prot
Match: DNJA4_MOUSE (DnaJ homolog subfamily A member 4 OS=Mus musculus GN=Dnaja4 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.197e-21
Identity = 61/153 (39.87%), Postives = 91/153 (59.48%), Query Frame = -1
Query:  171 FKRKGEDLFYEHILSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDS--LTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQAHAQEAYEEDEDMPGGAQRVQCA 623
            F+R+G+DL  +  + L+EALCGF+  +  LD R L+I S  GEV+K    K I  EGMP+Y+ P  KG + I F V FP+   L+ +++  LEA+LP R    +TD ++D+ E   L + N  E+  R+    +EAYEED++ P    + Q A
Sbjct:  252 FQRRGQDLIMKMKIQLSEALCGFKKTIKTLDDRVLVISSKSGEVIKHGDLKCIRNEGMPIYKAPLEKGVMIIQFLVVFPEKQWLSQEKLPQLEALLPPRQKVRITD-DMDQVE---LKEFNPNEQSWRQH---REAYEEDDEEPRAGVQCQTA 397          
BLAST of CN181807 vs. ExPASy Swiss-Prot
Match: DNJA4_HUMAN (DnaJ homolog subfamily A member 4 OS=Homo sapiens GN=DNAJA4 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.258e-20
Identity = 61/153 (39.87%), Postives = 90/153 (58.82%), Query Frame = -1
Query:  171 FKRKGEDLFYEHILSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDS--LTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQAHAQEAYEEDEDMPGGAQRVQCA 623
            F+R+G DL  +  + L+EALCGF+  +  LD R L+I S  GEV+K    + + +EGMP+Y+ P  KG L I F V FP+   L+ +++  LEA+LP R    +TD ++D+ E   L +    E+  R+    +EAYEEDED P    + Q A
Sbjct:  252 FQRRGHDLIMKMKIQLSEALCGFKKTIKTLDNRILVITSKAGEVIKHGDLRCVRDEGMPIYKAPLEKGILIIQFLVIFPEKHWLSLEKLPQLEALLPPRQKVRITD-DMDQVE---LKEFCPNEQNWRQH---REAYEEDEDGPQAGVQCQTA 397          
BLAST of CN181807 vs. ExPASy Swiss-Prot
Match: MAS5_SCHPO (Mitochondrial protein import protein mas5 OS=Schizosaccharomyces pombe GN=SPBC1734.11 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.580e-20
Identity = 61/157 (38.85%), Postives = 80/157 (50.96%), Query Frame = -1
Query:  165 KFKRKGEDLFYEHILSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDS--LTPDQVKALEAILPSRPL-SGMTDMELDECEETTLHDVNIEEEMRRKQAHAQEAYEEDEDMPGGAQRVQCAQQ 626
            +FKR G+ LFYE  + L  AL G Q  + HLD R L I   PGE ++P+  K +  +GM L QR    G LYI F V+FP+    TP+Q+  LE  LP R + S   +   +EC   T+                  + +EDED  GG   VQCAQQ
Sbjct:  252 RFKRSGDHLFYEAHVDLLTALAGGQIVVEHLDDRWLTIPIIPGECIRPNELKVLPGQGM-LSQRHHQPGNLYIRFHVDFPEPNFATPEQLALLEKALPPRKIESAPKNAHTEECVLATVDPTEKVRIDNNVDPTTATSMDEDEDEEGGHPGVQCAQQ 407          
BLAST of CN181807 vs. ExPASy Swiss-Prot
Match: MAS5_YEAST (Mitochondrial protein import protein MAS5 OS=Saccharomyces cerevisiae GN=YDJ1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.374e-16
Identity = 57/156 (36.54%), Postives = 84/156 (53.85%), Query Frame = -1
Query:  165 FKRKGEDLFYEHILSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDS--LTPDQVKALEAILPSRPLSGM-TDMELDECEETTLHDVNIEEEMRRKQAHAQEAYEEDEDMPGGAQRVQCAQQ 623
            FKR G+DL YE  + L  A+ G +FAL H+ G  L +   PGEV+ P   K I  +GMP+  +    G L I FT++FP++   + + +K LE ILP R +  +     +DEC    L D +  +  R + +     Y+ DE+  GG + VQCA Q
Sbjct:  259 FKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPI-PKYGGYGNLIIKFTIKFPENHFTSEENLKKLEEILPPRIVPAIPKKATVDEC---VLADFDPAKYNRTRASRGGANYDSDEEEQGG-EGVQCASQ 409          
The following BLAST results are available for this feature:
BLAST of CN181807 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
DNJA1_BOVIN3.596e-2643.51DnaJ homolog subfamily A member 1 OS=Bos taurus GN... [more]
DNAJ1_CERAE4.697e-2642.86DnaJ homolog subfamily A member 1 OS=Cercopithecus... [more]
DNJA2_HUMAN1.046e-2540.65DnaJ homolog subfamily A member 2 OS=Homo sapiens ... [more]
DNJA2_BOVIN2.331e-2540.00DnaJ homolog subfamily A member 2 OS=Bos taurus GN... [more]
DNJA2_RAT3.976e-2540.00DnaJ homolog subfamily A member 2 OS=Rattus norveg... [more]
DNJA2_MOUSE3.976e-2540.00DnaJ homolog subfamily A member 2 OS=Mus musculus ... [more]
DNJA4_MOUSE1.197e-2139.87DnaJ homolog subfamily A member 4 OS=Mus musculus ... [more]
DNJA4_HUMAN2.258e-2039.87DnaJ homolog subfamily A member 4 OS=Homo sapiens ... [more]
MAS5_SCHPO8.580e-2038.85Mitochondrial protein import protein mas5 OS=Schiz... [more]
MAS5_YEAST3.374e-1636.54Mitochondrial protein import protein MAS5 OS=Sacch... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001I03_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001I03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181807 ID=CN181807; Name=CN181807; organism=Citrus sinensis; type=EST; length=647bp
AACAAAAAACACTGCAAACATCAAAGCGTCCACAGCTTTGAGCATCAGAC
ACATGTGCTATTCAAATTATCTTTCCTTAGTAAATAGGTACTGAAATTTA
GCTTCATTTTAGTAAGCGTACAACAACTTAAACCACTTTCAATGATTGTT
CTTCGCCATCATCACTGTTGGGCACACTGCACTCTCTGGGCACCACCAGG
CATATCTTCGTCCTCCTCATATGCCTCTTGAGCATGAGCCTGCTTCCTCC
GCATCTCCTCCTCAATGTTGACATCATGCAATGTAGTCTCTTCACATTCA
TCTAGCTCCATGTCAGTCATCCCAGACAATGGCCTCGATGGGAGGATGGC
CTCTAGGGCCTTAACCTGATCTGGGGTCAGAGAATCAGGGAATTCAACTG
TGAAGTGAATGTACAGTTTCCCCTTCATGAACGGCCTCTGGTACAAGGGC
ATACCCTCCTCATTGATAGCCTTGTATGAATCAGGCTTAACAACTTCCCC
AGGATTCGATTTAATCAGAAGTTGCCTCCCATCCAGATGAGTCAGTGCAA
ACTGGAAACCGCATAGGGCCTCAGTTAGCGACAAAATATGCTCATAAAAA
AGATCTTCTCCCTTTCTCTTGAACTTTGCTCATTGATCCATGTTGGA
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