CN181807

Overview
NameCN181807
Unique NameCN181807
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length647
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181807 vs. ExPASy Swiss-Prot
Match: DNJA1_DICDI (DnaJ homolog subfamily A member 1 homolog OS=Dictyostelium discoideum GN=dnaja1 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.187e-15
Identity = 50/153 (32.68%), Postives = 76/153 (49.67%), Query Frame = -1
Query:  165 FKRKGEDLFYEHILSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQAHAQEAYEEDEDMPGGAQRVQCAQQ 623
            FKR G++L Y   L L +++ G QF +  LD R+L +    G+++K    + I  EGMP+ +    KGKL I F +E+P +LT D ++ L  ILP    +    +   +C+   L  VN     +     A  AY++     GGA   Q  QQ
Sbjct:  289 FKRNGDNLIYTKRLKLLDSIAGSQFIINTLDQRKLWVNHEKGDIIKQGDMRYIENEGMPI-KGTSRKGKLIIAFDIEYPSNLTNDDIEKLSKILPK---AATPSVSKSDCKSVGLSKVNFNTNEQSSHGGAGGAYQQH----GGAYGHQKQQQ 433          
BLAST of CN181807 vs. ExPASy Swiss-Prot
Match: DNJB5_MOUSE (DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.263e-12
Identity = 37/97 (38.14%), Postives = 56/97 (57.73%), Query Frame = -1
Query:  339 AKFKRKGEDLFYEHILSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALEAILP 629
            A F+R G ++ Y  ++SL EALCG    +  +DGR + +  N  +V+KP + K +  EG+P  + P  +G L + F V FPD LTP   + L+  LP
Sbjct:  252 AHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGRVIPLPCN--DVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346          
BLAST of CN181807 vs. ExPASy Swiss-Prot
Match: DNJB5_HUMAN (DnaJ homolog subfamily B member 5 OS=Homo sapiens GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.263e-12
Identity = 37/97 (38.14%), Postives = 56/97 (57.73%), Query Frame = -1
Query:  339 AKFKRKGEDLFYEHILSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALEAILP 629
            A F+R G ++ Y  ++SL EALCG    +  +DGR + +  N  +V+KP + K +  EG+P  + P  +G L + F V FPD LTP   + L+  LP
Sbjct:  252 AHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGRVIPLPCN--DVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346          
BLAST of CN181807 vs. ExPASy Swiss-Prot
Match: DNJB5_BOVIN (DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.263e-12
Identity = 37/97 (38.14%), Postives = 56/97 (57.73%), Query Frame = -1
Query:  339 AKFKRKGEDLFYEHILSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALEAILP 629
            A F+R G ++ Y  ++SL EALCG    +  +DGR + +  N  +V+KP + K +  EG+P  + P  +G L + F V FPD LTP   + L+  LP
Sbjct:  252 AHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGRVIPLPCN--DVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346          
BLAST of CN181807 vs. ExPASy Swiss-Prot
Match: DNAJ1_DROME (DnaJ protein homolog 1 OS=Drosophila melanogaster GN=DnaJ-1 PE=1 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 1.467e-11
Identity = 35/96 (36.46%), Postives = 57/96 (59.38%), Query Frame = -1
Query:  336 FKRKGEDLFYEHILSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALEAILPS 623
            FKR+G DL Y   +SL +ALCG   ++  L G ++ +  N  E++KP + + IN  G+P+ + P  +G L + F ++FPD+L P     L  +LP+
Sbjct:  240 FKREGIDLKYTAQISLKQALCGALVSVPTLQGSRIQVNPNH-EIIKPTTTRRINGLGLPVPKEPSRRGDLIVSFDIKFPDTLAPSLQNQLSELLPN 334          
The following BLAST results are available for this feature:
BLAST of CN181807 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
DNJA1_DICDI2.187e-1532.68DnaJ homolog subfamily A member 1 homolog OS=Dicty... [more]
DNJB5_MOUSE2.263e-1238.14DnaJ homolog subfamily B member 5 OS=Mus musculus ... [more]
DNJB5_HUMAN2.263e-1238.14DnaJ homolog subfamily B member 5 OS=Homo sapiens ... [more]
DNJB5_BOVIN2.263e-1238.14DnaJ homolog subfamily B member 5 OS=Bos taurus GN... [more]
DNAJ1_DROME1.467e-1136.46DnaJ protein homolog 1 OS=Drosophila melanogaster ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001I03_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001I03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181807 ID=CN181807; Name=CN181807; organism=Citrus sinensis; type=EST; length=647bp
AACAAAAAACACTGCAAACATCAAAGCGTCCACAGCTTTGAGCATCAGAC
ACATGTGCTATTCAAATTATCTTTCCTTAGTAAATAGGTACTGAAATTTA
GCTTCATTTTAGTAAGCGTACAACAACTTAAACCACTTTCAATGATTGTT
CTTCGCCATCATCACTGTTGGGCACACTGCACTCTCTGGGCACCACCAGG
CATATCTTCGTCCTCCTCATATGCCTCTTGAGCATGAGCCTGCTTCCTCC
GCATCTCCTCCTCAATGTTGACATCATGCAATGTAGTCTCTTCACATTCA
TCTAGCTCCATGTCAGTCATCCCAGACAATGGCCTCGATGGGAGGATGGC
CTCTAGGGCCTTAACCTGATCTGGGGTCAGAGAATCAGGGAATTCAACTG
TGAAGTGAATGTACAGTTTCCCCTTCATGAACGGCCTCTGGTACAAGGGC
ATACCCTCCTCATTGATAGCCTTGTATGAATCAGGCTTAACAACTTCCCC
AGGATTCGATTTAATCAGAAGTTGCCTCCCATCCAGATGAGTCAGTGCAA
ACTGGAAACCGCATAGGGCCTCAGTTAGCGACAAAATATGCTCATAAAAA
AGATCTTCTCCCTTTCTCTTGAACTTTGCTCATTGATCCATGTTGGA
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