CN181794

Overview
NameCN181794
Unique NameCN181794
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PRS8_MANSE (26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 3.526e-61
Identity = 111/161 (68.94%), Postives = 129/161 (80.12%), Query Frame = 2
Query:  140 SKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPRI 622
            S +GEG R YY+  I ELQL V +K+ NL RL+AQRNELN++VRML+EELQLLQE GSYVGEVVK M K KVLVKVHPEGK+VV             + RVALRN+SY LH ILP+KVDPLV+LM VEKVPDSTY+M+GGLD+QIKEIKEVIELP+KHP +
Sbjct:   10 STKGEGFRPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPEL 170          

HSP 2 Score: 36.1946 bits (82), Expect = 3.526e-61
Identity = 15/18 (83.33%), Postives = 18/18 (100.00%), Query Frame = 3
Query:  615 PELFESLGIAQPRGVLLY 668
            PELF++LGIAQP+GVLLY
Sbjct:  168 PELFDALGIAQPKGVLLY 185          
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PRS8_SCHPO (26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 5.995e-61
Identity = 108/160 (67.50%), Postives = 128/160 (80.00%), Query Frame = 2
Query:  143 KQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPRI 622
            +  E + QYY Q I + +L + QKT NL RLEAQRN LN+RVR+L+EE+QLLQEPGSYVGEV+K MGKNKVLVKVHPEGKYVV            P+ RVALRNDSY L  ILP+KVDPLV+LM VEK+PDSTY+M+GGL++QIKEIKEVIELP+KHP +
Sbjct:   11 QSNENIVQYYTQKIQDAELAILQKTQNLRRLEAQRNGLNARVRLLREEIQLLQEPGSYVGEVIKTMGKNKVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPEL 170          

HSP 2 Score: 36.1946 bits (82), Expect = 5.995e-61
Identity = 15/18 (83.33%), Postives = 17/18 (94.44%), Query Frame = 3
Query:  615 PELFESLGIAQPRGVLLY 668
            PELFESLGI QP+G+LLY
Sbjct:  168 PELFESLGIPQPKGILLY 185          
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PRS8_NAEFO (26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.732e-60
Identity = 108/168 (64.29%), Postives = 127/168 (75.60%), Query Frame = 2
Query:  119 VCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPRI 622
            V  A  +S    GL+ YY+  I E ++ +R K  NL RL+AQRNELN RVR LKEELQ LQEPGS+VGEVVKVMGK KVL+K+  EGKY+V            P  RVALRNDSY LH ILP+K+DPLV+LMKVEKVPD+TY+M+GGLD+QIKEIKEVIELPIKHP +
Sbjct:   14 VVLASSSSASVNGLKNYYIAKIQEKEIVLRDKIENLRRLQAQRNELNGRVRSLKEELQQLQEPGSHVGEVVKVMGKKKVLIKISQEGKYIVDIDKSIELKDLTPGVRVALRNDSYALHKILPNKIDPLVSLMKVEKVPDATYEMVGGLDEQIKEIKEVIELPIKHPEL 181          

HSP 2 Score: 36.965 bits (84), Expect = 1.732e-60
Identity = 15/18 (83.33%), Postives = 18/18 (100.00%), Query Frame = 3
Query:  615 PELFESLGIAQPRGVLLY 668
            PELFESLGIAQP+GV++Y
Sbjct:  179 PELFESLGIAQPKGVIMY 196          
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PRS8_YEAST (26S protease regulatory subunit 8 homolog OS=Saccharomyces cerevisiae GN=RPT6 PE=1 SV=4)

HSP 1 Score: 199.519 bits (506), Expect = 1.556e-55
Identity = 96/156 (61.54%), Postives = 120/156 (76.92%), Query Frame = 2
Query:  155 GLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPRI 622
            G++ Y+ Q I E +L++R KT N+ RLEAQRN LN +VR +K+EL+LLQEPGSYVGEV+K++   KVLVKV PEGKY+V             S RV LR+DSY+LH +L +K DPLV+LM VEKVPDSTYDM+GGL +QIKEIKEVIELP+KHP +
Sbjct:   18 GIKPYFEQKIQETELKIRSKTENVRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVIKIVSDKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPEL 173          

HSP 2 Score: 37.7354 bits (86), Expect = 1.556e-55
Identity = 16/18 (88.89%), Postives = 18/18 (100.00%), Query Frame = 3
Query:  615 PELFESLGIAQPRGVLLY 668
            PELFESLGIAQP+GV+LY
Sbjct:  171 PELFESLGIAQPKGVILY 188          
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PRS8_ENCCU (26S protease regulatory subunit 8 homolog OS=Encephalitozoon cuniculi GN=RPT6 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.046e-47
Identity = 90/161 (55.90%), Postives = 115/161 (71.43%), Query Frame = 2
Query:  143 KQGEGL-RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPRI 622
            +  EG  + +Y   +  L++Q+ +KT  L  LE +R ELN RVR L+EE+ ++QEP S VG VV+ MGK +VLVK +P+GKY+V               RVALR+DSY +H ILP+KVDPLV+LM VEKVPDSTY MIGGLD+QIKEI+EVIELPIKHP +
Sbjct:   61 RMAEGFCKNFYSNKLDHLEVQIAKKTKILRVLEQKRAELNRRVRFLREEISIVQEPSSNVGVVVEKMGKMQVLVKTNPDGKYLVKVEPGVNYDELKAGVRVALRSDSYDVHRILPTKVDPLVSLMMVEKVPDSTYQMIGGLDEQIKEIREVIELPIKHPEL 221          

HSP 2 Score: 37.3502 bits (85), Expect = 1.046e-47
Identity = 16/18 (88.89%), Postives = 18/18 (100.00%), Query Frame = 3
Query:  615 PELFESLGIAQPRGVLLY 668
            PELFE+LGIAQP+GVLLY
Sbjct:  219 PELFENLGIAQPKGVLLY 236          
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.879e-22
Identity = 51/152 (33.55%), Postives = 86/152 (56.58%), Query Frame = 2
Query:  167 YYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPRI 622
            Y  + I +L+LQVR        LEA +  L   +  L+ E+  L++P ++ G V++V+  ++ +V+ +   ++VV            P TRVAL   +  +  ILP+  DP V   +V + P+ TY+ IGGL +Q++E++E IELP+KHP +
Sbjct:   18 YLKRRIRQLELQVRM-------LEADKERLERELSRLRSEMSRLRQPPAFAGSVIEVLDDDRAIVQNYNGPRFVVRIAPWIDKSKLRPGTRVALDQRTMAIIEILPASKDPAVLGFEVVERPNVTYNDIGGLKKQLQELREAIELPLKHPEL 162          

HSP 2 Score: 31.187 bits (69), Expect = 6.879e-22
Identity = 13/18 (72.22%), Postives = 15/18 (83.33%), Query Frame = 3
Query:  615 PELFESLGIAQPRGVLLY 668
            PELFE +GI  P+GVLLY
Sbjct:  160 PELFEEVGIDPPKGVLLY 177          
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 8.948e-22
Identity = 51/152 (33.55%), Postives = 87/152 (57.24%), Query Frame = 2
Query:  167 YYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPRI 622
            Y  + I +L+LQVR        LEA +  L   +  L+ E+  L++P ++ G V++V+ +++ +V+ +   ++VV            P TRVAL   +  +  ILP+  DP V   +V + P+ TY+ IGGL +Q++E++E IELP+KHP +
Sbjct:   21 YLKRRIRQLELQVRM-------LEADKERLERELSRLRSEMSRLRQPPAFAGTVIEVLDEDRAIVQNYNGPRFVVRIAPWIDRKKLRPGTRVALDQRTMAVVEILPTSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPEL 165          

HSP 2 Score: 31.187 bits (69), Expect = 8.948e-22
Identity = 13/18 (72.22%), Postives = 15/18 (83.33%), Query Frame = 3
Query:  615 PELFESLGIAQPRGVLLY 668
            PELFE +GI  P+GVLLY
Sbjct:  163 PELFEEVGIDPPKGVLLY 180          
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.562e-21
Identity = 45/144 (31.25%), Postives = 82/144 (56.94%), Query Frame = 2
Query:  191 LQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPRI 622
            L  ++R+   +   +E +R  L+  V+ L+ E++  + P   +  V +V+  ++V VK      +V+            P  RVAL   ++ +  +LPS+ DP+V  M+VE+ PD +Y+ IGGL++Q++E+KE +ELP+K P +
Sbjct:   33 LMWKIRKLEKDKLLIENERTRLDREVKSLRGEIERFRTPPLVIATVTEVLDDHRVAVKSTTGPHFVINYSRFIDRKQLEPGARVALNQQTFSIVDVLPSEKDPVVTGMEVEEKPDVSYEQIGGLEEQVREVKETVELPLKKPEL 176          

HSP 2 Score: 31.9574 bits (71), Expect = 2.562e-21
Identity = 13/18 (72.22%), Postives = 15/18 (83.33%), Query Frame = 3
Query:  615 PELFESLGIAQPRGVLLY 668
            PELFE +GI  P+GVLLY
Sbjct:  174 PELFEKIGIEPPKGVLLY 191          
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PSMR_PYRAB (Proteasome-activating nucleotidase OS=Pyrococcus abyssi GN=pan PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.334e-21
Identity = 50/152 (32.89%), Postives = 85/152 (55.92%), Query Frame = 2
Query:  167 YYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPRI 622
            Y  + I +L+LQVR        LEA +  L   +  L+ E+  L++P ++ G V++V+  ++ +V+ +   ++VV            P  RVAL   +  +  +LPS  DP V   +V + P+ TY+ IGGL +Q++E++E IELP+KHP +
Sbjct:   21 YLKRRIRQLELQVRM-------LEADKERLERELSRLRSEMSRLRQPPAFAGTVIEVLDDDRAIVQNYNGPRFVVRIAPWIERDKLRPGARVALDQRTMAIIELLPSSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPEL 165          

HSP 2 Score: 31.187 bits (69), Expect = 3.334e-21
Identity = 13/18 (72.22%), Postives = 15/18 (83.33%), Query Frame = 3
Query:  615 PELFESLGIAQPRGVLLY 668
            PELFE +GI  P+GVLLY
Sbjct:  163 PELFEEVGIDPPKGVLLY 180          
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 7.340e-21
Identity = 47/151 (31.13%), Postives = 85/151 (56.29%), Query Frame = 2
Query:  170 YLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPRI 622
            Y  ++  L+ ++RQ    +  LEA +  L   +  L+ E+  L++P ++ G V++V+   + +V+ +   ++VV            P  RVAL   +  +  +LPS+ DP V   +V + P  TY+ IGGL++Q++E++E IELP+KHP +
Sbjct:   13 YDDYVTFLKRRIRQLELQVRTLEADKERLERELSRLRMEMSRLRQPPAFAGNVIEVLDDERAIVQNYNGPRFVVRIAPWIERDKLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPKVTYNDIGGLEKQLQELREAIELPLKHPEL 163          

HSP 2 Score: 31.5722 bits (70), Expect = 7.340e-21
Identity = 13/18 (72.22%), Postives = 15/18 (83.33%), Query Frame = 3
Query:  615 PELFESLGIAQPRGVLLY 668
            PELFE +GI  P+GVLLY
Sbjct:  161 PELFEQVGIEPPKGVLLY 178          
The following BLAST results are available for this feature:
BLAST of CN181794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99
Match NameE-valueIdentityDescription
PRS8_MANSE3.526e-6168.9426S protease regulatory subunit 8 OS=Manduca sexta... [more]
PRS8_SCHPO5.995e-6167.5026S protease regulatory subunit 8 homolog OS=Schiz... [more]
PRS8_NAEFO1.732e-6064.2926S protease regulatory subunit 8 homolog OS=Naegl... [more]
PRS8_YEAST1.556e-5561.5426S protease regulatory subunit 8 homolog OS=Sacch... [more]
PRS8_ENCCU1.046e-4755.9026S protease regulatory subunit 8 homolog OS=Encep... [more]
PSMR_PYRFU6.879e-2233.55Proteasome-activating nucleotidase OS=Pyrococcus f... [more]
PSMR_PYRHO8.948e-2233.55Proteasome-activating nucleotidase OS=Pyrococcus h... [more]
PSMR_METTH2.562e-2131.25Proteasome-activating nucleotidase OS=Methanobacte... [more]
PSMR_PYRAB3.334e-2132.89Proteasome-activating nucleotidase OS=Pyrococcus a... [more]
PSMR_PYRKO7.340e-2131.13Proteasome-activating nucleotidase OS=Pyrococcus k... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001H20_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001H20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181794 ID=CN181794; Name=CN181794; organism=Citrus sinensis; type=EST; length=668bp
GAGGCGAGACTTGATCCGAAAGACAATTAGATTCGAACAAATCGAACTCG
TTCACTCGGAAAGAATGGCCGCTGTAGGAATCGAAACGAAGCAGCCGGAA
TCGGCGGCGCCAGAGGAGGTGTGTGCGGCGAAAGGAGCATCGAAACAAGG
AGAGGGATTGAGGCAATACTACCTCCAACACATTCACGAACTCCAGCTCC
AAGTCCGTCAAAAAACCCACAATCTCAATCGCCTCGAAGCCCAGCGTAAC
GAACTCAATTCTAGAGTGCGGATGCTTAAAGAAGAATTACAGCTTCTTCA
AGAGCCTGGATCCTATGTCGGTGAAGTTGTTAAAGTTATGGGAAAAAATA
AGGTTCTTGTTAAGGTTCATCCTGAGGGGAAATATGTTGTTGATATTGAT
AAAAGTATTGATATAACCAAGATCACTCCGTCAACAAGAGTTGCACTTCG
TAATGACAGCTATGTTCTTCATTTGATCCTGCCAAGCAAAGTAGATCCCC
TGGTCAACCTTATGAAGGTTGAAAAGGTCCCTGATTCTACATATGACATG
ATTGGTGGCCTTGATCAGCAAATTAAGGAGATCAAGGAGGTCATTGAGCT
TCCTATCAAACATCCCCGAATTGTTCGAGTCTCTTGGAATAGCTCAACCC
AGGGGTGTATTGCTATAT
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