CN181794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PRS10_YEAST (26S protease subunit RPT4 OS=Saccharomyces cerevisiae GN=RPT4 PE=1 SV=4) HSP 1 Score: 79.7221 bits (195), Expect = 2.521e-17 Identity = 52/178 (29.21%), Postives = 89/178 (50.00%), Query Frame = 2 Query: 89 KQPESAAPEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPRI 622 ++P PE+ K ++ ++ L+H Q++Q+ N+ LE ++ + +++ LQ G +GEV+K + + K +VK +Y+V RV L + + ILP + DPLV M + + T+D IGGL +QI+E++EVIELP+K+P I Sbjct: 41 EEPSRVDPEQEAHNKALNQ----FKRKLLEH-RRYDDQLKQRRQNIRDLEKLYDKTEN-------DIKALQSIGQLIGEVMKELSEEKYIVKASSGPRYIVGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETDPLVYNMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEI 206 HSP 2 Score: 29.261 bits (64), Expect = 2.521e-17 Identity = 11/18 (61.11%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 615 PELFESLGIAQPRGVLLY 668 PE+F+ +GI P+GVLLY Sbjct: 204 PEIFQRVGIKPPKGVLLY 221
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.266e-17 Identity = 44/143 (30.77%), Postives = 71/143 (49.65%), Query Frame = 2 Query: 188 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHP 616 EL+ Q+RQ + +E Q+ VR LK E++ L+ P VG + ++ +V+V+ +++V R L S + +LPS D V M++ P TY+ IGGL++QI EI+E +ELP+ P Sbjct: 34 ELKEQIRQLESDKRYIETQKIRYEREVRKLKSEIEHLKTPPLIVGTITDIIDSGRVVVRSSAGPRFLVRVSQAVNPTTLKAGVRCTLNQQSLAIVEVLPSTYDSQVYGMELVDAPTETYEDIGGLEKQIMEIREAVELPMTRP 176 HSP 2 Score: 30.4166 bits (67), Expect = 4.266e-17 Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 615 PELFESLGIAQPRGVLLY 668 P+LFE +GI P+GVLLY Sbjct: 176 PDLFEKIGINPPKGVLLY 193
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PSMR_METMP (Proteasome-activating nucleotidase OS=Methanococcus maripaludis GN=pan PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 4.267e-17 Identity = 43/142 (30.28%), Postives = 75/142 (52.82%), Query Frame = 2 Query: 197 LQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPRI 622 L++ K ++NR Q + N +LK EL L+ P +G ++ + + K +VK ++V P RV L + + +LP + D M++E+ PD +++ IGGL+ QI++IKEV+ELP+K+P + Sbjct: 35 LRLELKNKDINRENVQIKKENE---ILKRELDKLRIPPLILGTILDKVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPEL 173 HSP 2 Score: 31.9574 bits (71), Expect = 4.267e-17 Identity = 13/18 (72.22%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 615 PELFESLGIAQPRGVLLY 668 PELFE +GI P+GVLLY Sbjct: 171 PELFEKVGIVPPKGVLLY 188
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 5.551e-17 Identity = 47/147 (31.97%), Postives = 74/147 (50.34%), Query Frame = 2 Query: 188 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPRIVR 628 E+QL VR + L+ + L + K E++ + P V+ V+ +VLV+ VV P VAL + +LP K DP+V M++ + P+ TY IGGL++QI+E++EV+ELP+K+P I R Sbjct: 16 EVQL-VRLLEEKIKSLQIEIENLRKELNYYKAEMEKMLSPPLIEAVVLDVLPDGRVLVRSSSGPNLVVNIASHIDQKLIKPGISVALNQRGSTILEVLPQKEDPIVKTMEIIERPNVTYSEIGGLEEQIRELREVVELPLKNPEIFR 161 HSP 2 Score: 28.8758 bits (63), Expect = 5.551e-17 Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 615 PELFESLGIAQPRGVLLY 668 PE+F +G+ P+GVLLY Sbjct: 157 PEIFREIGVEPPKGVLLY 174
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PSMR_METVS (Proteasome-activating nucleotidase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.059e-16 Identity = 45/151 (29.80%), Postives = 75/151 (49.67%), Query Frame = 2 Query: 170 YLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPRI 622 YL + L++ K ++ R Q + N +LK EL L+ P +G V+ + + K +VK ++V P RV L + + +LP + D M++E+ PD + IGGL+ QI++IKEV+ELP+K+P + Sbjct: 26 YLAELESKVLRLELKNKDITRENVQIKKENE---ILKRELDKLRIPPLILGTVLDRVNERKAVVKSSTGPNFLVNLSQFVEPDDIVPGARVCLNQQTLAVVEVLPKEKDYRAMAMELEEKPDILFGDIGGLNNQIRDIKEVVELPLKNPEL 173 HSP 2 Score: 31.9574 bits (71), Expect = 2.059e-16 Identity = 13/18 (72.22%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 615 PELFESLGIAQPRGVLLY 668 PELFE +GI P+GVLLY Sbjct: 171 PELFEKVGIVPPKGVLLY 188
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PSMR_METM6 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.059e-16 Identity = 42/142 (29.58%), Postives = 75/142 (52.82%), Query Frame = 2 Query: 197 LQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPRI 622 L++ K +++R Q + N +LK EL L+ P +G ++ + + K +VK ++V P RV L + + +LP + D M++E+ PD +++ IGGL+ QI++IKEV+ELP+K+P + Sbjct: 35 LRLELKNKDISRENVQIKKENE---ILKRELDKLRIPPLILGTILDRVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPEL 173 HSP 2 Score: 31.9574 bits (71), Expect = 2.059e-16 Identity = 13/18 (72.22%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 615 PELFESLGIAQPRGVLLY 668 PELFE +GI P+GVLLY Sbjct: 171 PELFEKVGIVPPKGVLLY 188
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.059e-16 Identity = 42/142 (29.58%), Postives = 75/142 (52.82%), Query Frame = 2 Query: 197 LQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPRI 622 L++ K +++R Q + N +LK EL L+ P +G ++ + + K +VK ++V P RV L + + +LP + D M++E+ PD +++ IGGL+ QI++IKEV+ELP+K+P + Sbjct: 35 LRLELKNKDISRENVQIKKENE---ILKRELDKLRIPPLILGTILDRVNERKAVVKSSTGPNFLVNLSQFVDPDDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPEL 173 HSP 2 Score: 31.9574 bits (71), Expect = 2.059e-16 Identity = 13/18 (72.22%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 615 PELFESLGIAQPRGVLLY 668 PELFE +GI P+GVLLY Sbjct: 171 PELFEKVGIVPPKGVLLY 188
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PSMR_METM7 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.676e-16 Identity = 42/142 (29.58%), Postives = 74/142 (52.11%), Query Frame = 2 Query: 197 LQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPRI 622 L++ K ++ R Q + N +LK EL L+ P +G ++ + + K +VK ++V P RV L + + +LP + D M++E+ PD +++ IGGL+ QI++IKEV+ELP+K+P + Sbjct: 35 LRLELKNKDVTRENVQIKKENE---ILKRELDKLRIPPLILGTILDKVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPEL 173 HSP 2 Score: 31.9574 bits (71), Expect = 2.676e-16 Identity = 13/18 (72.22%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 615 PELFESLGIAQPRGVLLY 668 PELFE +GI P+GVLLY Sbjct: 171 PELFEKVGIVPPKGVLLY 188
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PS10B_ARATH (26S protease regulatory subunit S10B homolog B OS=Arabidopsis thaliana GN=RPT4B PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.677e-16 Identity = 48/162 (29.63%), Postives = 82/162 (50.62%), Query Frame = 2 Query: 137 ASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPRI 622 A ++ + Y + +H +L+ R +T N L A + E N +++L+ LQ G +GEV++ + +++VK +YVV TRV L + + LP +VDP+V M E + +Y +GGL QI+E++E IELP+ +P + Sbjct: 8 ARRRTAAVTDYRKKLLHHKELESRVRTAREN-LRAAKKEFNKT----EDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPEL 164 HSP 2 Score: 28.1054 bits (61), Expect = 2.677e-16 Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 615 PELFESLGIAQPRGVLLY 668 PELF +GI P+GVLLY Sbjct: 162 PELFLRVGIKPPKGVLLY 179
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PS10A_ARATH (26S protease regulatory subunit 10B homolog A OS=Arabidopsis thaliana GN=RPT4A PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.640e-16 Identity = 48/154 (31.17%), Postives = 79/154 (51.30%), Query Frame = 2 Query: 161 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPRI 622 R+ LQH EL+ +VR NL + + N+ +++L+ LQ G +GEV++ + +++VK +YVV TRV L + + LP +VDP+V M E + +Y +GGL QI+E++E IELP+ +P + Sbjct: 19 RKKLLQH-KELESRVRTARENLRGAKKEFNKT-------EDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPEL 164 HSP 2 Score: 28.1054 bits (61), Expect = 7.640e-16 Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 615 PELFESLGIAQPRGVLLY 668 PELF +GI P+GVLLY Sbjct: 162 PELFLRVGIKPPKGVLLY 179 The following BLAST results are available for this feature:
BLAST of CN181794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181794 ID=CN181794; Name=CN181794; organism=Citrus sinensis; type=EST; length=668bpback to top |