CN181794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PRS8A_ARATH (26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana GN=RPT6A PE=2 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 7.329e-86 Identity = 154/187 (82.35%), Postives = 167/187 (89.30%), Query Frame = 2 Query: 65 MAAVGIETKQPESAAPEEVCAAKGAS-KQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPRI 622 MAAVG+++++PE+A EE C KGA+ KQGEGL+QYYLQHIHELQ Q+RQKT+NLNRLEAQRNELNSRVRML+EELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVV PSTRVALRNDSYVLHL+LPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHP + Sbjct: 1 MAAVGVDSRRPETAM-EETCNVKGAAAKQGEGLKQYYLQHIHELQRQLRQKTNNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPEL 186 HSP 2 Score: 38.5058 bits (88), Expect = 7.329e-86 Identity = 17/18 (94.44%), Postives = 18/18 (100.00%), Query Frame = 3 Query: 615 PELFESLGIAQPRGVLLY 668 PELFESLGIAQP+GVLLY Sbjct: 184 PELFESLGIAQPKGVLLY 201
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PRS8B_ARATH (26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana GN=RPT6B PE=2 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 3.030e-81 Identity = 148/187 (79.14%), Postives = 160/187 (85.56%), Query Frame = 2 Query: 65 MAAVGIETKQPESAAPEEVCAAKGAS-KQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPRI 622 MAAVG+E + P +A EE C KGA+ KQGEGL +YYLQH+ ELQ R+K++NLNRLEAQRNELNSRVRML+EELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVV PSTRVALRNDSYVLHL+LPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHP + Sbjct: 1 MAAVGVEARPPVTAM-EETCNVKGAAAKQGEGLNKYYLQHLDELQRLQREKSYNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPEL 186 HSP 2 Score: 38.5058 bits (88), Expect = 3.030e-81 Identity = 17/18 (94.44%), Postives = 18/18 (100.00%), Query Frame = 3 Query: 615 PELFESLGIAQPRGVLLY 668 PELFESLGIAQP+GVLLY Sbjct: 184 PELFESLGIAQPKGVLLY 201
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PRS8_RAT (26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 1.028e-63 Identity = 117/171 (68.42%), Postives = 135/171 (78.95%), Query Frame = 2 Query: 110 PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPRI 622 PE++ +G K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EELQLLQE GSYVGEVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY LH ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHP + Sbjct: 6 PEQMELEEG--KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEL 174 HSP 2 Score: 37.3502 bits (85), Expect = 1.028e-63 Identity = 16/18 (88.89%), Postives = 18/18 (100.00%), Query Frame = 3 Query: 615 PELFESLGIAQPRGVLLY 668 PELFE+LGIAQP+GVLLY Sbjct: 172 PELFEALGIAQPKGVLLY 189
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PRS8_PIG (26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 1.028e-63 Identity = 117/171 (68.42%), Postives = 135/171 (78.95%), Query Frame = 2 Query: 110 PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPRI 622 PE++ +G K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EELQLLQE GSYVGEVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY LH ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHP + Sbjct: 6 PEQMELEEG--KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEL 174 HSP 2 Score: 37.3502 bits (85), Expect = 1.028e-63 Identity = 16/18 (88.89%), Postives = 18/18 (100.00%), Query Frame = 3 Query: 615 PELFESLGIAQPRGVLLY 668 PELFE+LGIAQP+GVLLY Sbjct: 172 PELFEALGIAQPKGVLLY 189
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PRS8_MOUSE (26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 1.028e-63 Identity = 117/171 (68.42%), Postives = 135/171 (78.95%), Query Frame = 2 Query: 110 PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPRI 622 PE++ +G K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EELQLLQE GSYVGEVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY LH ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHP + Sbjct: 6 PEQMELEEG--KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEL 174 HSP 2 Score: 37.3502 bits (85), Expect = 1.028e-63 Identity = 16/18 (88.89%), Postives = 18/18 (100.00%), Query Frame = 3 Query: 615 PELFESLGIAQPRGVLLY 668 PELFE+LGIAQP+GVLLY Sbjct: 172 PELFEALGIAQPKGVLLY 189
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PRS8_HUMAN (26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 1.028e-63 Identity = 117/171 (68.42%), Postives = 135/171 (78.95%), Query Frame = 2 Query: 110 PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPRI 622 PE++ +G K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EELQLLQE GSYVGEVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY LH ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHP + Sbjct: 6 PEQMELEEG--KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEL 174 HSP 2 Score: 37.3502 bits (85), Expect = 1.028e-63 Identity = 16/18 (88.89%), Postives = 18/18 (100.00%), Query Frame = 3 Query: 615 PELFESLGIAQPRGVLLY 668 PELFE+LGIAQP+GVLLY Sbjct: 172 PELFEALGIAQPKGVLLY 189
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PRS8_BOVIN (26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 1.028e-63 Identity = 117/171 (68.42%), Postives = 135/171 (78.95%), Query Frame = 2 Query: 110 PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPRI 622 PE++ +G K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EELQLLQE GSYVGEVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY LH ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHP + Sbjct: 6 PEQMELEEG--KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEL 174 HSP 2 Score: 37.3502 bits (85), Expect = 1.028e-63 Identity = 16/18 (88.89%), Postives = 18/18 (100.00%), Query Frame = 3 Query: 615 PELFESLGIAQPRGVLLY 668 PELFE+LGIAQP+GVLLY Sbjct: 172 PELFEALGIAQPKGVLLY 189
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PRS8_DROME (26S protease regulatory subunit 8 OS=Drosophila melanogaster GN=Pros45 PE=1 SV=2) HSP 1 Score: 224.557 bits (571), Expect = 1.460e-62 Identity = 113/164 (68.90%), Postives = 131/164 (79.88%), Query Frame = 2 Query: 131 KGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPRI 622 + A +GEG R YY+Q I ELQL V +K NL RL+AQRNELN++VRML+EELQLLQE GSYVGEVVK M K KVLVKVHPEGK+VV P+ RVALRN+SY LH ILP+KVDPLV+LM VEKVPDSTY+M+GGLD+QIKEIKEVIELP+KHP + Sbjct: 10 ESAYHKGEGFRSYYIQKIEELQLVVAEKHQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPEL 173 HSP 2 Score: 36.1946 bits (82), Expect = 1.460e-62 Identity = 15/18 (83.33%), Postives = 18/18 (100.00%), Query Frame = 3 Query: 615 PELFESLGIAQPRGVLLY 668 PELF++LGIAQP+GVLLY Sbjct: 171 PELFDALGIAQPKGVLLY 188
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PRS8_XENLA (26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2 SV=2) HSP 1 Score: 224.172 bits (570), Expect = 5.498e-62 Identity = 113/159 (71.07%), Postives = 129/159 (81.13%), Query Frame = 2 Query: 140 SKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHP 616 S+ G GLRQYYL I +LQL V K+ NL RL+AQRNELN++VR+L+EELQLLQE GSYVGEVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY LH ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHP Sbjct: 9 SRGGTGLRQYYLSKIEDLQLVVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHP 167 HSP 2 Score: 34.6538 bits (78), Expect = 5.498e-62 Identity = 15/18 (83.33%), Postives = 17/18 (94.44%), Query Frame = 3 Query: 615 PELFESLGIAQPRGVLLY 668 PE FE+LGIAQP+GVLLY Sbjct: 167 PEHFEALGIAQPKGVLLY 184
BLAST of CN181794 vs. ExPASy Swiss-Prot
Match: PRS8_DICDI (26S protease regulatory subunit 8 OS=Dictyostelium discoideum GN=psmC5 PE=1 SV=2) HSP 1 Score: 218.394 bits (555), Expect = 2.074e-61 Identity = 106/157 (67.52%), Postives = 129/157 (82.17%), Query Frame = 2 Query: 152 EGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPRI 622 +G++ YY I EL+++V +K +L RLEAQRNELN+RVRMLKEELQLL PGS+V EVVK+MGKNKVLVKV+PEGK+VV PSTR AL+++SY LH ILP+K+DPLV+LMKVEK+PDSTYDM+GGLD+QIKEIKEVIELPIKHP + Sbjct: 14 KGIKSYYCSKIEELEIKVNEKAQDLRRLEAQRNELNNRVRMLKEELQLLTNPGSHVAEVVKLMGKNKVLVKVNPEGKFVVDIDPTVDIAKLTPSTRAALKHESYTLHRILPNKIDPLVSLMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPEL 170 HSP 2 Score: 38.5058 bits (88), Expect = 2.074e-61 Identity = 17/18 (94.44%), Postives = 18/18 (100.00%), Query Frame = 3 Query: 615 PELFESLGIAQPRGVLLY 668 PELFESLGIAQP+GVLLY Sbjct: 168 PELFESLGIAQPKGVLLY 185 The following BLAST results are available for this feature:
BLAST of CN181794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181794 ID=CN181794; Name=CN181794; organism=Citrus sinensis; type=EST; length=668bpback to top |