CN181793
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181793 vs. ExPASy Swiss-Prot
Match: PRS7B_ARATH (26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana GN=RPT1B PE=3 SV=2) HSP 1 Score: 176.022 bits (445), Expect = 1.889e-43 Identity = 95/165 (57.58%), Postives = 120/165 (72.73%), Query Frame = -2 Query: 254 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 748 RMVRELF MAR I+F DEID+IG AR + G G+ D+EVQRTMLE+L QLDGF+A IKVLMATNR DILD ALLRPGR+DRK+EF P+ E R I KIH+R M+ R I + +A ++GA++++VC EAGM+A+ RR VT++DF AV KV+K Sbjct: 285 RMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGS-DNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDAVNKVVK 448
BLAST of CN181793 vs. ExPASy Swiss-Prot
Match: PRS10_BOVIN (26S protease regulatory subunit S10B OS=Bos taurus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.889e-43 Identity = 90/163 (55.21%), Postives = 118/163 (72.39%), Query Frame = -2 Query: 260 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV 748 R++RE+F AR+H P IIFMDEID+IG R G+ + D E+QRT++ELLNQ+DGF+ +++K++MATNR D LD ALLRPGR+DRKI PNE++RLDILKIH+ + ID + I + +G +GA+L VCTEAGMFA+R V QEDF AV KV Sbjct: 213 RLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374
BLAST of CN181793 vs. ExPASy Swiss-Prot
Match: PSMR_METMJ (Proteasome-activating nucleotidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.496e-43 Identity = 86/163 (52.76%), Postives = 123/163 (75.46%), Query Frame = -2 Query: 260 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV 748 R+VRELF +A++ APSIIF+DEID+IG+ R +S + +GD EVQRT+++LL ++DGF+ +K++ ATNRIDILD+ALLRPGR DR IE P P+ + RL ILKIH++ MN+ ++L +++ G +GA+L+A+C EAGMFA+R R V EDF A+ K+ Sbjct: 233 RLVRELFDLAKQRAPSIIFIDEIDAIGAHRNDSTT-SGDREVQRTLMQLLAEMDGFDNRGDVKIVAATNRIDILDRALLRPGRFDRMIEIPLPDHQGRLAILKIHTQYMNIGEDVNLSEVSRLTEGKNGADLRAICMEAGMFAIRMERDAVNSEDFMKAIDKL 394
BLAST of CN181793 vs. ExPASy Swiss-Prot
Match: PRS6A_SCHPO (26S protease regulatory subunit 6A OS=Schizosaccharomyces pombe GN=tbp1 PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.599e-42 Identity = 85/169 (50.30%), Postives = 125/169 (73.96%), Query Frame = -2 Query: 242 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 748 ++VR+ F +A+E +P+IIF+DE+D+IG+ R +S GD EVQRTMLELLNQLDGF + +++KV+ ATNR+D LD ALLR GR+DRK+EFP PNEE+R+ IL+IHSR+M + I+ +++A + +GA LK+VC EAGM ALR+ + E F + +V ++++ Sbjct: 265 KLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKA-GDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHFMDGILEVQMRKSK 432
BLAST of CN181793 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.089e-42 Identity = 84/162 (51.85%), Postives = 122/162 (75.31%), Query Frame = -2 Query: 263 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAK 748 R+VRELF +A++ +PSIIF+DEID+IG++R ES + +GD EV RT+++LL ++DGF ++++ ATNRIDILD+ALLRPGR DR IE P P+ E R+ IL IH MN+ + +D++ IA + +G +GA+L+++C EAGMFA+R VT EDFE ++ K Sbjct: 233 RLVRELFELAKKKSPSIIFIDEIDAIGASRTESNT-SGDREVHRTLMQLLAEMDGFSNRGDVRIIGATNRIDILDRALLRPGRFDRIIEIPAPDIEGRVSILNIHCAGMNIDKKVDIRDIATRTDGKNGADLRSICMEAGMFAIRSDHEMVTLEDFEQSIEK 393
BLAST of CN181793 vs. ExPASy Swiss-Prot
Match: PSMR2_HALSA (Proteasome-activating nucleotidase 2 OS=Halobacterium salinarium GN=pan2 PE=3 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 7.936e-42 Identity = 80/163 (49.08%), Postives = 121/163 (74.23%), Query Frame = -2 Query: 260 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV 748 ++VR+LF +AR+H P+++F+DEID+I S R +S + +GD+EVQRTM++LL+++DGF+ I+++ ATNR D+LD+A+LRPGR DR IE P+PN R I +IH+R MN+ +D ++A SGA++KA+CTEAGMFA+R+ R V +DF+ A K+ Sbjct: 229 KLVRDLFQVARDHEPAVVFIDEIDAIASKRTDSKT-SGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDRAILRPGRFDRLIEVPHPNVGGREKIFRIHTRAMNVADSVDFGELAADTGDLSGADVKAICTEAGMFAIRDDRTEVRMQDFQSAREKL 390
BLAST of CN181793 vs. ExPASy Swiss-Prot
Match: PSMR_METAC (Proteasome-activating nucleotidase OS=Methanosarcina acetivorans GN=pan PE=3 SV=2) HSP 1 Score: 169.859 bits (429), Expect = 1.354e-41 Identity = 90/173 (52.02%), Postives = 122/173 (70.52%), Query Frame = -2 Query: 233 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV-MKKETEKNM 748 ++VRE+F MAR+ APSIIF+DE+DSI + R+ +G D EVQRT+++LL ++DGF+ I+++ ATNR D+LD A+LRPGR DR + P P E+R ILKIH +M L ID KK+A+ G SGA+LKA+ TEAGMFA+R+ + V EDF AV KV M +T+K M Sbjct: 239 KLVREIFEMARKKAPSIIFIDELDSIAARRLNETTG-ADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAVRKDKALVEMEDFLEAVEKVSMAADTQKMM 410
BLAST of CN181793 vs. ExPASy Swiss-Prot
Match: PSMR_METMA (Proteasome-activating nucleotidase OS=Methanosarcina mazei GN=pan PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.309e-41 Identity = 89/173 (51.45%), Postives = 121/173 (69.94%), Query Frame = -2 Query: 233 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV-MKKETEKNM 748 ++VRE+F MAR+ APSIIF+DE+DSI + R+ +G D EVQRT+++LL ++DGF+ I+++ ATNR D+LD A+LRPGR DR + P P E+R ILKIH +M L ID KK+A+ G SGA+LKA+ TEAGMFA+R + V E+F AV KV M +T+K M Sbjct: 239 KLVREIFEMARKKAPSIIFIDELDSIAARRLNETTG-ADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEAGMFAVRRDKELVEMEEFLEAVEKVSMAADTQKMM 410
BLAST of CN181793 vs. ExPASy Swiss-Prot
Match: PRS10_SCHPO (Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe GN=rpt4 PE=2 SV=2) HSP 1 Score: 169.088 bits (427), Expect = 2.309e-41 Identity = 87/178 (48.88%), Postives = 122/178 (68.54%), Query Frame = -2 Query: 218 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK-KETEKNMSLRKL 748 R++RE+F A+EH P +IFMDEID+IG R G+ + D E+QRT++ELLNQ+DGF+ + K++MATNR D LD ALLRPGR+DRKIE P PNE R++ILKIH +++ ID + + + +G +GA+L+ V TEAG A++E R +V Q D A KV K+ E + +KL Sbjct: 212 RIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMSAARKVADLKKLEGTIDYQKL 388
BLAST of CN181793 vs. ExPASy Swiss-Prot
Match: PRS10_YEAST (26S protease subunit RPT4 OS=Saccharomyces cerevisiae GN=RPT4 PE=1 SV=4) HSP 1 Score: 167.548 bits (423), Expect = 6.719e-41 Identity = 83/178 (46.63%), Postives = 120/178 (67.42%), Query Frame = -2 Query: 218 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK-KETEKNMSLRKL 748 R++RE+F A+EH P IIFMDE+D+IG R G+ + D E+QRT++ELL Q+DGF+ + K++MATNR D LD ALLRPGR+DRK+E P PNE RL+I KIH+ ++ D + + +G +GA+++ TEAG FA+R+ R H+ +D AV KV + K+ E + +KL Sbjct: 261 RIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGT-SADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMKAVRKVAEVKKLEGTIEYQKL 437 The following BLAST results are available for this feature:
BLAST of CN181793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 367
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181793 ID=CN181793; Name=CN181793; organism=Citrus sinensis; type=EST; length=749bpback to top |