CN181791
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181791 vs. ExPASy Swiss-Prot
Match: RL23_META3 (50S ribosomal protein L23P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl23p PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.756e-17 Identity = 38/85 (44.71%), Postives = 61/85 (71.76%), Query Frame = -2 Query: 203 LDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGI 457 +D + ++K P+ +E MK IE+ N LVF +D +A K +K+AVK++++++ K +NTLI P G KKAY++L +YDA +VA +GI Sbjct: 1 MDAFDVIKMPIISEKTMKLIEEENKLVFYIDKKATKTDVKNAVKELFDVEVKDLNTLITPKGKKKAYIKLKDEYDAGEVAANLGI 85
BLAST of CN181791 vs. ExPASy Swiss-Prot
Match: RL23_METJA (50S ribosomal protein L23P OS=Methanocaldococcus jannaschii GN=rpl23p PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.013e-16 Identity = 40/85 (47.06%), Postives = 60/85 (70.59%), Query Frame = -2 Query: 203 LDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGI 457 +D + ++K P+ TE ++ IE+ N LVF VD RA K+ IK A+K++++++ +KVNTLI P G KKAYV+L YDA +A +GI Sbjct: 1 MDAFDVIKAPVVTEKTVRMIEEENKLVFYVDRRATKQDIKRAMKELFDVEVEKVNTLITPKGEKKAYVKLKEGYDASKIAASLGI 85
BLAST of CN181791 vs. ExPASy Swiss-Prot
Match: RL23_PYRKO (50S ribosomal protein L23P OS=Pyrococcus kodakaraensis GN=rpl23p PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.323e-16 Identity = 41/85 (48.24%), Postives = 60/85 (70.59%), Query Frame = -2 Query: 203 LDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGI 457 +D Y+++ PL TE A+ IE N L FIVD RA K+ IK AV++M+ ++ KVNTL+ G KKAYV+L P+YDA ++A ++G+ Sbjct: 1 MDPYKVIIRPLVTEKAVSLIERENKLTFIVDRRATKQDIKRAVEEMFNVKVAKVNTLVTMKGEKKAYVKLKPEYDASEIAARLGL 85
BLAST of CN181791 vs. ExPASy Swiss-Prot
Match: RL23_PYRFU (50S ribosomal protein L23P OS=Pyrococcus furiosus GN=rpl23p PE=3 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.323e-16 Identity = 41/85 (48.24%), Postives = 61/85 (71.76%), Query Frame = -2 Query: 203 LDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGI 457 +D Y+++ P+ TE A+ IE N L FIVD RA K+ IK AV++++ ++ +KVNTLI P G KKAYV+L P+Y A +VA ++G+ Sbjct: 1 MDPYKVIIRPVVTEKAISLIEKENKLTFIVDRRATKQDIKRAVEEIFNVKVEKVNTLITPRGEKKAYVKLKPEYSASEVAARLGL 85
BLAST of CN181791 vs. ExPASy Swiss-Prot
Match: RL23_THEON (50S ribosomal protein L23P OS=Thermococcus onnurineus (strain NA1) GN=rpl23p PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.257e-16 Identity = 41/85 (48.24%), Postives = 61/85 (71.76%), Query Frame = -2 Query: 203 LDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGI 457 +D Y+++ P+ TE A+ IE+ N L FIVD RA K+ IK AV+ M++++ +KVNTLI G KKAYV+L P+Y A ++A +IG+ Sbjct: 1 MDPYKVIIRPVVTEKAVAMIENENKLTFIVDRRATKQDIKRAVEAMFDVKVEKVNTLITMRGEKKAYVKLKPEYSASEIAARIGL 85
BLAST of CN181791 vs. ExPASy Swiss-Prot
Match: RL23_PYRHO (50S ribosomal protein L23P OS=Pyrococcus horikoshii GN=rpl23p PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.257e-16 Identity = 39/85 (45.88%), Postives = 60/85 (70.59%), Query Frame = -2 Query: 203 LDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGI 457 +D Y+++ P+ TE A+ IE N L FIVD RA K IK A+++++ ++ +KVNTLI P G KKAYV+L P+Y A ++A ++G+ Sbjct: 1 MDPYKVIIRPVVTEKAISLIEKENKLTFIVDRRATKTDIKKAIEEIFNVKVEKVNTLITPKGEKKAYVKLKPEYSASEIAARLGL 85
BLAST of CN181791 vs. ExPASy Swiss-Prot
Match: RL23_THEGJ (50S ribosomal protein L23P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl23p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.849e-16 Identity = 40/85 (47.06%), Postives = 61/85 (71.76%), Query Frame = -2 Query: 203 LDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGI 457 +D Y+++ PL TE A+ IE N L FIVD +A K+ IK AV++M+ ++ +KVNTLI G KKAYV+L P+Y+A ++A ++G+ Sbjct: 1 MDPYKVIIRPLVTEKAVSLIEKENKLTFIVDRKATKQDIKRAVEEMFNVKVEKVNTLITMKGEKKAYVKLRPEYNASEIAARLGL 85
BLAST of CN181791 vs. ExPASy Swiss-Prot
Match: RL23_METKA (50S ribosomal protein L23P OS=Methanopyrus kandleri GN=rpl23p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.849e-16 Identity = 42/85 (49.41%), Postives = 60/85 (70.59%), Query Frame = -2 Query: 200 DHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 454 D + +L YP+ TE AM+ +E N L FIV A+K IK AV+++++++ +KVNTLI P G KKAYV+L P+Y A DVA +GI+ Sbjct: 11 DPHDVLLYPVATEKAMRLMEAENKLTFIVRRDANKPLIKKAVEELFDVEVEKVNTLITPTGEKKAYVKLKPEYRAEDVAVDLGIL 95
BLAST of CN181791 vs. ExPASy Swiss-Prot
Match: RL23_PYRAB (50S ribosomal protein L23P OS=Pyrococcus abyssi GN=rpl23p PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16 Identity = 38/85 (44.71%), Postives = 61/85 (71.76%), Query Frame = -2 Query: 203 LDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGI 457 +D Y+++ P+ T+ A+ IE N L FIVD RA K+ IK A+++++ ++ +KVNTLI P G KKAYV+L P+Y A ++A ++G+ Sbjct: 1 MDPYKVIIRPVITDKAISLIEKENKLTFIVDRRATKQDIKRAIEEIFNVKVEKVNTLITPKGEKKAYVKLKPEYSASEIAARLGL 85
BLAST of CN181791 vs. ExPASy Swiss-Prot
Match: RL23_THESM (50S ribosomal protein L23P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl23p PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.259e-15 Identity = 40/85 (47.06%), Postives = 57/85 (67.06%), Query Frame = -2 Query: 203 LDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGI 457 +D Y+++ P+ TE A+ +E N L FIVD RA K IK AV+ +YE++ KVN +I G KKAYV+L P+Y A +VA +IG+ Sbjct: 1 MDPYKVIVRPVVTEKAISMVERENKLTFIVDKRATKPDIKKAVETVYEVKVDKVNIVITMKGEKKAYVKLKPEYSASEVAARIGL 85 The following BLAST results are available for this feature:
BLAST of CN181791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181791 ID=CN181791; Name=CN181791; organism=Citrus sinensis; type=EST; length=695bpback to top |