CN181787
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181787 vs. ExPASy Swiss-Prot
Match: GH34_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.4 OS=Oryza sativa subsp. japonica GN=GH3.4 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.982e-33 Identity = 68/107 (63.55%), Postives = 78/107 (72.90%), Query Frame = -2 Query: 387 YVIFWELLVKDAANSPSDEVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQYKAPRCVSFTPILELLNGRVVSKHFSPAAPHW 707 YV+FWEL V CCL VEE LNSVYRQ R AD SIGPLEIRVV +GTF++LMDYA+SRGASINQYKAPRCV P++ELL+GRV + +FSP P W Sbjct: 496 YVLFWELRSPAGGTPVPASVFEDCCLAVEEGLNSVYRQCRAADRSIGPLEIRVVADGTFDKLMDYALSRGASINQYKAPRCVRPGPVVELLDGRVQATYFSPKCPKW 602
BLAST of CN181787 vs. ExPASy Swiss-Prot
Match: GH317_ARATH (Indole-3-acetic acid-amido synthetase GH3.17 OS=Arabidopsis thaliana GN=GH3.17 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.105e-25 Identity = 55/111 (49.55%), Postives = 74/111 (66.67%), Query Frame = -2 Query: 381 YVIFWELLVKDAANSPS--DEVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQYKAPRCVSFTPILELLNGRVVSKHFSPAAPHWVP 707 YV+FWEL + + + P D+ + CC VE+ L+ VYR+ R D SIGPLEIRVV GTF+ LMD+ +S+G+S+NQYK PRCV LE+L+ RV+ + FS P W P Sbjct: 494 YVLFWELKPRHSNDPPKLDDKTMEDCCSEVEDCLDYVYRRCRNRDKSIGPLEIRVVSLGTFDSLMDFCVSQGSSLNQYKTPRCVKSGGALEILDSRVIGRFFSKRVPQWEP 604
BLAST of CN181787 vs. ExPASy Swiss-Prot
Match: GH39_ARATH (Putative indole-3-acetic acid-amido synthetase GH3.9 OS=Arabidopsis thaliana GN=GH3.9 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.328e-24 Identity = 57/110 (51.82%), Postives = 73/110 (66.36%), Query Frame = -2 Query: 381 YVIFWELLVKDAANSPSDEVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQYKAPRCV-SFTPILELLNGRVVSKHFSPAAPHWVP 707 YV+FWE+ +++ +CC+ VEE L+ +YRQ R + SIG LEIRVVK GTFE+LMD IS+G S NQYK PRCV S + +LLNG V++ FSP P WVP Sbjct: 481 YVLFWEI-----QGHLEPKLMEECCVAVEEELDYIYRQCRTKERSIGALEIRVVKPGTFEKLMDLIISQGGSFNQYKTPRCVKSNSATFKLLNGHVMASFFSPRDPTWVP 585
BLAST of CN181787 vs. ExPASy Swiss-Prot
Match: GH311_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.11 OS=Oryza sativa subsp. japonica GN=GH3.11 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.574e-23 Identity = 55/107 (51.40%), Postives = 73/107 (68.22%), Query Frame = -2 Query: 393 YVIFWELL-VKDAANSPSD-EVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQYKAPRCVSFTPILELLNGRVVSKHFSPAAP 707 YV+FWE+ D +P D ++L CC VEESL+ VYR+ R D SIGPLEIR+V+ G F+ LMD +S G+SINQYK PRC+ + L+LLN +V++ FSP P Sbjct: 481 YVLFWEIKSTHDERPAPLDAQLLESCCAAVEESLDYVYRRCRAHDRSIGPLEIRLVEAGAFDALMDLLVSHGSSINQYKTPRCIESSLALKLLNSKVIACFFSPQDP 587
BLAST of CN181787 vs. ExPASy Swiss-Prot
Match: GH37_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.7 OS=Oryza sativa subsp. japonica GN=GH3.7 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 42/108 (38.89%), Postives = 62/108 (57.41%), Query Frame = -2 Query: 393 YVIFWELLVKDAANSPSD---EVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQYKAPRCVSFTPILELLNGRVVSKHFSPAAP 707 Y++FWEL +N D + +CCL VE+ + +YR+ R SI LEIR++ +G F+ LMD+ +SRG S +QYK P + + +L RVV + FS A P Sbjct: 504 YILFWELTNTCDSNVAIDIDQTAMEKCCLAVEDHFDEMYRKIRHR-GSISALEIRILSHGAFDALMDFFVSRGTSASQYKTPTAIRSKEAMMVLEERVVGRFFSQATP 610
BLAST of CN181787 vs. ExPASy Swiss-Prot
Match: GH35_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.5 OS=Oryza sativa subsp. japonica GN=GH3.5 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13 Identity = 39/105 (37.14%), Postives = 64/105 (60.95%), Query Frame = -2 Query: 399 YVIFWELLVKDAANSPSDEVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQYKAPRCV--SFTPILELLNGRVVSKHFSPA 707 YVIFWEL + SDEVL+ C ++ + G +IGPLE+R+++ GTF+E++D+ +S G +++Q+K PR V S + +L++L+ V +FS A Sbjct: 479 YVIFWEL-----SGDASDEVLSSCANALDLAFIDAGYTGSRKIKTIGPLELRILRKGTFKEILDHFLSLGGAVSQFKTPRFVNPSNSKVLQILSRNVTQSYFSTA 578
BLAST of CN181787 vs. ExPASy Swiss-Prot
Match: GH32_ARATH (Indole-3-acetic acid-amido synthetase GH3.2 OS=Arabidopsis thaliana GN=GH3.2 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.325e-11 Identity = 34/50 (68.00%), Postives = 42/50 (84.00%), Query Frame = -2 Query: 561 YVIFWELLVKDAANS-PSDEVLNQCCLVVEESLNSVYRQGRVADNSIGPL 707 YVI+WELL +D +N+ S+EV+ +CCL +EESLNSVYRQ RVAD SIGPL Sbjct: 490 YVIYWELLGRDQSNALMSEEVMAKCCLEMEESLNSVYRQSRVADKSIGPL 539 The following BLAST results are available for this feature:
BLAST of CN181787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181787 ID=CN181787; Name=CN181787; organism=Citrus sinensis; type=EST; length=708bpback to top |