CN181782

Overview
NameCN181782
Unique NameCN181782
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2495 contig Csv1_Contig2495:6..697. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: ECHA8_MYCBO (Probable enoyl-CoA hydratase echA8 OS=Mycobacterium bovis GN=echA8 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.225e-22
Identity = 63/194 (32.47%), Postives = 101/194 (52.06%), Query Frame = 2
Query:   35 SYKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 616
            +Y++I +E    + RV  + LNRP   NAL+ +   E   A + LD +P++ AI+++G+   F +G D+K ++ +T          F++ F  D       + A+   R P IA++ G  +GGG ++   CD+   +  A F   E+ L +   +G  QRL   +G   AM+L LTGR     EA+  GLVSRV
Sbjct:    2 TYETILVER---DQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLT----------FADAFTADFFATWGKLAAV---RTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRV 179          
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: ECHM_BOVIN (Enoyl-CoA hydratase, mitochondrial OS=Bos taurus GN=ECHS1 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.600e-22
Identity = 66/197 (33.50%), Postives = 100/197 (50.76%), Query Frame = 2
Query:   62 KTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVK 652
            K  NS V  + LNRP   NAL      E  +AL + +++P V AIVL+G    F +G D+K + S+T          F   +        D +T   R +KPVIA+++G  +GGG ++   CDI +  + A F   E+ +      G  QRL   VG   AME+ LTG R    +AK+ GLVS++F     +++ ++
Sbjct:   41 KGRNSNVGLIQLNRPKALNALCNGLIVELNQALQAFEEDPAVGAIVLTGGEKVFAAGADIKEMQSLT----------FQNCYSGGFLSHWDQLT---RVKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETVVEEAIQ 224          
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: ECH12_MYCBO (Probable enoyl-CoA hydratase echA12 OS=Mycobacterium bovis GN=echA12 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.089e-22
Identity = 61/183 (33.33%), Postives = 98/183 (53.55%), Query Frame = 2
Query:   68 PNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITA-DLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSR 613
            P   +  + LNRP + N+++ +      +AL+ +  + +V  +VL+G G  F SG D K+ + V  H  +  R  ++    R +  L D +  + R  +PVIA+++G  IGGG+ +  A DIR  S  A+F    ++  +TA +LG    LP  +G   A E+ LTGR     EA+ +GLVSR
Sbjct:   25 PRPEIAQITLNRPERMNSMAFDVMVPLKEALAQVSYDNSVRVVVLTGAGRGFSSGADHKS-AGVVPHVENLTRPTYA---LRSMELLDDVILMLRRLHQPVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGLSYLLPRAIGSSRAFEIMLTGRDVSAEEAERIGLVSR 203          
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: ECHA8_MYCLE (Probable enoyl-CoA hydratase echA8 OS=Mycobacterium leprae GN=echA8 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.564e-22
Identity = 65/193 (33.68%), Postives = 100/193 (51.81%), Query Frame = 2
Query:   38 YKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 616
            Y +I ++G     RV  + LNRP   NAL+ +   E   A   LD +P+V AI+++G+   F +G D+K ++S+T          F++ F  D       + A+   R P+IA++ G  +GGG ++   CD+   +  A F   E+ L +   +G  QRL   +G   AM+L LTGR     EA+  GLVSRV
Sbjct:    3 YDTILVDGY---QRVGIITLNRPQALNALNSQMMNEITNAAKELDIDPDVGAILITGSPKVFAAGADIKEMASLT----------FTDAFDADFFSAWGKLAAV---RTPMIAAVAGYALGGGCELAMMCDLLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTIDAAEAERSGLVSRV 179          
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: ECH12_MYCTU (Probable enoyl-CoA hydratase echA12 OS=Mycobacterium tuberculosis GN=echA12 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.940e-22
Identity = 60/183 (32.79%), Postives = 97/183 (53.01%), Query Frame = 2
Query:   68 PNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITA-DLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSR 613
            P   +  + LNRP + N+++ +      +AL+ +  + +V  +VL+G G  F  G D K+ + V  H  +  R  ++    R +  L D +  + R  +PVIA+++G  IGGG+ +  A DIR  S  A+F    ++  +TA +LG    LP  +G   A E+ LTGR     EA+ +GLVSR
Sbjct:   25 PRPEIAQITLNRPERMNSMAFDVMVPLKEALAQVSYDNSVRVVVLTGAGRGFSPGADHKS-AGVVPHVENLTRPTYA---LRSMELLDDVILMLRRLHQPVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGLSYLLPRAIGSSRAFEIMLTGRDVSAEEAERIGLVSR 203          
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: ECHD2_MOUSE (Enoyl-CoA hydratase domain-containing protein 2, mitochondrial OS=Mus musculus GN=Echdc2 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 5.146e-21
Identity = 64/198 (32.32%), Postives = 99/198 (50.00%), Query Frame = 2
Query:   47 IKIEGKT-PNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYE 634
            I+++  T PN  +  + +NRP+ RNAL   F +E  +AL+ L ++  V  ++  S     FC+G DLK    ++D    T        F + +R L   + A      P IA++ G  +GGG+++  ACD+R  +  A   + E    +    G  QRLP  +G   A EL  TGRR  G +A+ELGLV+     + E
Sbjct:   34 IQVQALTGPNQGITEILMNRPNARNALGNVFVSELLEALAQLREDQQVRVLLFRSAVKGVFCAGADLKEREQMSDVEVGT--------FVQRLRGLMSEIAAFP---VPTIAAMDGFALGGGLELALACDLRIAASSAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLNGAQARELGLVNHAVAQNEE 220          
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: ECH12_MYCLE (Probable enoyl-CoA hydratase echA12 OS=Mycobacterium leprae GN=echA12 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.721e-21
Identity = 63/197 (31.98%), Postives = 100/197 (50.76%), Query Frame = 2
Query:   68 PNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITA-DLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVS------RVFGTSYEL 637
            P   V  + LNRP + N+++ +      + L  +  + +V  +VL+G G  FCSG D K  + V      T   R      R +  L++ + A+ R  +PVIA+I+G  IGGG+ +  A D+R  S  A+F    ++  ++A +LG    LP  VG   A E+ L+GR     EA+++GLVS      R+  T Y +
Sbjct:   27 PRPEVALITLNRPGRMNSMALDLMKSLKQVLKRITYDHSVRVVVLTGAGRGFCSGADQKFTAPVPQVEGLTQPVRAL----RAMELLEEVILALRRLHQPVIAAINGPAIGGGLCLALAADVRVASTRAYFRAAGINNGLSASELGLSYLLPRAVGSSRAFEIMLSGRDVGAEEAEQIGLVSYRVSDDRLLDTCYSI 219          
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: ECHM_HUMAN (Enoyl-CoA hydratase, mitochondrial OS=Homo sapiens GN=ECHS1 PE=1 SV=4)

HSP 1 Score: 100.523 bits (249), Expect = 8.778e-21
Identity = 64/194 (32.99%), Postives = 102/194 (52.58%), Query Frame = 2
Query:   35 SYKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 616
            +++ I  E +  N+ V  + LNRP   NAL      E  +AL + +++P V AIVL+G    F +G D+K + +++          +S KF +      D +T +   +KPVIA+++G   GGG ++   CDI +  + A F+  E+ +      G  QRL   VG   AME+ LTG R    +AK+ GLVS++
Sbjct:   32 NFEYIIAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLTGGDKAFAAGADIKEMQNLSFQDC------YSSKFLKH----WDHLTQV---KKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKI 212          
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: ECHM_DICDI (Probable enoyl-CoA hydratase, mitochondrial OS=Dictyostelium discoideum GN=echs1 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.146e-20
Identity = 61/193 (31.61%), Postives = 95/193 (49.22%), Query Frame = 2
Query:   77 RVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVKL 655
            RV  + LNRP   NALS    +E   A+    ++ +V +I+++G+   F +G D+K +  VT            + +  D+      +T I   RKP+IA+++G  +GGG ++   CDI    + A F   E+ L      G  QRL   +G   AMEL LTG     +EA++ GLVS+V      L +  K+
Sbjct:   33 RVGLVTLNRPKSLNALSDGLISEINSAVKLFQEDKDVGSIIITGSEKAFAAGADIKEMEKVT----------LPDAYNNDLLAQWHDLTKI---RKPIIAAVNGYALGGGCELAMMCDIIIAGEKAVFGQPEIKLGTIPGCGGTQRLIRAIGKSKAMELVLTGNNLTAVEAEKAGLVSKVVPVEELLTEATKM 212          
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: ECHD2_BOVIN (Enoyl-CoA hydratase domain-containing protein 2, mitochondrial OS=Bos taurus GN=ECHDC2 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.146e-20
Identity = 61/190 (32.11%), Postives = 95/190 (50.00%), Query Frame = 2
Query:   68 PNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYE 634
            PN  +  + +NRPS RNAL   F ++  +AL+ L ++  V  ++  SG    FC+G DLK    +++     + G F ++ R         +T I     P IA++ G  +GGG+++  ACD+R  +  A   + E    +    G  QRLP  +G   A EL  TGRR  G +A+ LGLV+     + E
Sbjct:   42 PNQGIAEILMNRPSARNALGNVFVSQLLEALAQLREDRQVRVLIFRSGVKGVFCAGADLKEREQMSE----AEVGLFVQRLR-------GLMTEIAAFPAPTIAAMDGFALGGGLELALACDLRVAASSAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGAQAQALGLVNHAVAQNEE 220          
The following BLAST results are available for this feature:
BLAST of CN181782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 200
Match NameE-valueIdentityDescription
ECHA8_MYCBO1.225e-2232.47Probable enoyl-CoA hydratase echA8 OS=Mycobacteriu... [more]
ECHM_BOVIN1.600e-2233.50Enoyl-CoA hydratase, mitochondrial OS=Bos taurus G... [more]
ECH12_MYCBO2.089e-2233.33Probable enoyl-CoA hydratase echA12 OS=Mycobacteri... [more]
ECHA8_MYCLE3.564e-2233.68Probable enoyl-CoA hydratase echA8 OS=Mycobacteriu... [more]
ECH12_MYCTU7.940e-2232.79Probable enoyl-CoA hydratase echA12 OS=Mycobacteri... [more]
ECHD2_MOUSE5.146e-2132.32Enoyl-CoA hydratase domain-containing protein 2, m... [more]
ECH12_MYCLE6.721e-2131.98Probable enoyl-CoA hydratase echA12 OS=Mycobacteri... [more]
ECHM_HUMAN8.778e-2132.99Enoyl-CoA hydratase, mitochondrial OS=Homo sapiens... [more]
ECHM_DICDI1.146e-2031.61Probable enoyl-CoA hydratase, mitochondrial OS=Dic... [more]
ECHD2_BOVIN1.146e-2032.11Enoyl-CoA hydratase domain-containing protein 2, m... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001H13_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001H13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181782 ID=CN181782; Name=CN181782; organism=Citrus sinensis; type=EST; length=693bp
GGCCTTTTTCACATCAGCCAAACAGATGGAAGAGAGTTACAAATCGATAA
AAATCGAGGGAAAAACTCCAAATTCTCGAGTCATTTATCTGTATCTTAAC
CGTCCATCGCAACGCAACGCACTATCACGTGAATTCTTCACTGAATTCCC
TAAGGCCTTATCTTCCCTCGACCAAAATCCTAACGTCAACGCCATCGTCC
TCTCAGGCACCGGCGACCACTTCTGCTCCGGAATCGATCTGAAAACACTA
AGTTCGGTCACCGACCATACCACTTCCACCGACCGCGGCCGCTTCTCCGA
GAAGTTCCGGCGAGATATCAGGTTCTTGCAGGATGCGGTAACTGCCATCG
AGCGATGTCGGAAGCCAGTCATCGCATCTATCCACGGGGCGTGTATCGGA
GGCGGCGTCGATATTGTCACTGCCTGTGATATTCGGTTCTGTTCAAAAGA
TGCTTTTTTTTCGGTCAAAGAGGTTGACTTGGCTATCACGGCAGATCTCG
GGACTTTACAGAGGCTTCCGGCGATTGTCGGGTATGGTAACGCGATGGAA
TTGGCGTTGACGGGTCGTAGGTTTTGGGGTTTGGAGGCTAAGGAGTTGGG
TCTGGTTTCTCGGGTTTTCGGGACGAGTTATGAATTGGATCAGGGTGTCA
AGCTTGTTGCCGAGGGAAATTGCTGAAAAATCTCCTCTTGCCG
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