CN181782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: FADB_AERHH (Fatty acid oxidation complex subunit alpha OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=fadB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.697e-11 Identity = 45/192 (23.44%), Postives = 80/192 (41.67%), Query Frame = 2 Query: 89 LYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVKLVAE 664 L + P N L R +A+++L Q + ++L+ D F G D+ + D + G + D +AIE P +++I G +GGG + + + D R A + E L I G RLP ++G NA+E TG+ + +A ++G + V V+++ + Sbjct: 20 LRFDAPGSVNKLDRATLLSLSEAIAALQQERELKGLILTSGKDAFIVGADITEFLELFDLPQADLLGWLKKA--------NDIFSAIEDLPVPTLSAIKGHALGGGCETILSTDFRLADTSAKIGLPETKLGIMPGFGGTVRLPRVIGADNALEWITTGKDYRADDALKVGAIDAVVAPDALQSAAVQMIKD 203
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: ECHP_HUMAN (Peroxisomal bifunctional enzyme OS=Homo sapiens GN=EHHADH PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 3.697e-11 Identity = 45/167 (26.95%), Postives = 73/167 (43.71%), Query Frame = 2 Query: 116 NALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 616 NA+S + + L + + AIV+ G F +G D++ S+ + L V I+R KPV+A+I G GGG+++ C R +A + EV L + Q LP + G A++L +GRR EA +LG++ +V Sbjct: 22 NAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIRGFSAPRTFGLT----------------LGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKV 172
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: MENB_HAEIN (Naphthoate synthase OS=Haemophilus influenzae GN=menB PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.828e-11 Identity = 55/197 (27.92%), Postives = 84/197 (42.64%), Query Frame = 2 Query: 32 ESYKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDH-FCSGIDLKTLSSVTDHTTSTDRGRFSE-KFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 616 E Y I+ T + + +NRP RNA + E A S + N+ IVL+G G+ FCSG D K + + + F+RDIR C KPV+A + G IGGG + CD+ +++A F + + +VG A E+ R++ EA ++GLV+ V Sbjct: 20 EGYSDIRYHKSTDG--IAKITINRPEVRNAFRPQTVKEMMTAFSDARFDENIGVIVLTGEGEKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRDIR----------SCPKPVVAMVAGYAIGGGHVLHMLCDLTIAAENAIFGQTGPKVGSFDGGWGASYMARLVGQKKAREIWFLCRQYNAQEALDMGLVNTV 204
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: HIBCH_XENTR (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus tropicalis GN=hibch PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.828e-11 Identity = 52/176 (29.55%), Postives = 87/176 (49.43%), Query Frame = 2 Query: 95 LNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDH-FCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLG---TLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVS 610 LNRP NAL+ L +++P +++ G G FC+G D++ +VTD + DR ++ F R+ L +A+ +KP +A I G +GGGV + R S++ F++ E + + D+G L RLP +G + LALTG R G + ++ G+ + Sbjct: 50 LNRPKALNALNLGMIRLIYPQLGLWEEDPETYLVIIKGVGGKAFCAGGDIR---AVTDAGKAGDR--LAQDFFREEYILNNAIGTY---KKPYVALIDGITMGGGVGLSVHGHFRVASENTLFAMPETAIGLFPDVGGGYFLPRLPGKLG----LYLALTGFRLKGSDVQKAGIAT 213
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: MENB_STAES (Naphthoate synthase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=menB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.305e-11 Identity = 62/190 (32.63%), Postives = 84/190 (44.21%), Query Frame = 2 Query: 95 LNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDH-FCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQ--DAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDL-AITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVK 652 +NRP RNA + + E A S + NV+ IVL+G GD FCSG D K RG DI L D I KPVIA + G IGGG + CD+ + +A F + + A G+ L IVG+ A E+ R++ EA ++GLV+ V D+ VK Sbjct: 27 INRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDKAFCSGGDQK------------KRGHGGYVGEDDIPRLNVLDLQRLIRVIPKPVIAMVRGYAIGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGS-GYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLEQVEDETVK 203
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: MENB_STAEQ (Naphthoate synthase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=menB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.305e-11 Identity = 62/190 (32.63%), Postives = 84/190 (44.21%), Query Frame = 2 Query: 95 LNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDH-FCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQ--DAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDL-AITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVK 652 +NRP RNA + + E A S + NV+ IVL+G GD FCSG D K RG DI L D I KPVIA + G IGGG + CD+ + +A F + + A G+ L IVG+ A E+ R++ EA ++GLV+ V D+ VK Sbjct: 27 INRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDKAFCSGGDQK------------KRGHGGYVGEDDIPRLNVLDLQRLIRVIPKPVIAMVRGYAIGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGS-GYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLEQVEDETVK 203
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: FADB_VIBSL (Fatty acid oxidation complex subunit alpha OS=Vibrio splendidus (strain LGP32) GN=fadB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.305e-11 Identity = 47/208 (22.60%), Postives = 85/208 (40.87%), Query Frame = 2 Query: 38 YKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVKLVA 661 Y++ ++ K + L P+ N L KAL +L+ + + ++L+ D F G D+ + + + +RF + +E P ++ + G +GGG + V A D R K + E L I G RLP ++G +AME+ G+ EA ++GL+ + T L+ + V+ Sbjct: 3 YQANTLQVKELQDGIAELSFCAPASVNKLDLATLESLDKALDALNAHAGLRGLILTSNKDAFIVGADITEFLGLF--------AKPEAELDEWLRFANSIFSKLEDLPVPTLSMMRGHALGGGCECVLATDFRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEIITQGKACRADEALKVGLLDAIVETDQLLESAINTVS 202
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: ECHH_RHOCA (Probable enoyl-CoA hydratase OS=Rhodobacter capsulatus GN=fadB1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.305e-11 Identity = 54/191 (28.27%), Postives = 85/191 (44.50%), Query Frame = 2 Query: 35 SYKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLV 607 SY +I+ E + + + L+RP NAL+ E AL AIVL+G+G FCSG DL ++ + + R + + + AI C PV+A+++GA G G ++ A D+ ++ A F + + D G LP VG AM +AL + EA +GL+ Sbjct: 2 SYHTIRYE---ISEGLAVITLDRPEVMNALNAAMRHELTAALHRA--RGEARAIVLTGSGRAFCSGQDLGDGAAEGLNLETVLREEY-----------EPLLQAIYSCPLPVLAAVNGAAAGAGANLALAADVVIAAQSAAFMQAFTRIGLMPDAGGTWWLPRQVGMARAMGMALFAEKIGAEEAARMGLI 176
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: PKSI_BACSU (Putative polyketide biosynthesis enoyl-CoA isomerase pksI OS=Bacillus subtilis GN=pksI PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.235e-11 Identity = 50/198 (25.25%), Postives = 91/198 (45.96%), Query Frame = 2 Query: 74 SRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTS-TDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVKLVAE 664 S +I + + + +NA S+E + +A + QNP A++L+G ++F SG + L + T TD +S A++ C PVIA++ G IGGG + DI S+++ ++ + T +G +P +G+ A E+ L + G + ++ G+ +V + LD V+L E Sbjct: 13 SAIIQVKMQDRTHKNAFSQELTDDLIQAFEYIRQNPKYKAVILTGYDNYFASGGTQEGLLRIQQGLTKFTDDNLYS--------------LALD-CEIPVIAAMQGHGIGGGFVMGLFADIVILSRESVYTANFMKYGFTPGMGATFIVPKKLGFSLAQEILLNAGSYRGADLEKRGVPFKVLPRAEVLDYAVELAQE 195
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: CDY1_HUMAN (Testis-specific chromodomain protein Y 1 OS=Homo sapiens GN=CDY1 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.235e-11 Identity = 47/197 (23.86%), Postives = 93/197 (47.21%), Query Frame = 2 Query: 35 SYKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGT 625 +Y+ I ++ + ++++ R +++NAL+ E E AL+S + + ++ S G FC G+D + +T + +++ V + +KP++ S++G IG G I+ CD+ + ++ A+F + D + P ++G +A E+ + GR+ EA GLVS+VF T Sbjct: 282 TYRDIVVKKEDGFTQIVLS--TRSTEKNALNTEVIKEIVNALNSAAADDS-KLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDT-------IKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLT 468 The following BLAST results are available for this feature:
BLAST of CN181782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181782 ID=CN181782; Name=CN181782; organism=Citrus sinensis; type=EST; length=693bpback to top |