CN181782

Overview
NameCN181782
Unique NameCN181782
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2495 contig Csv1_Contig2495:6..697. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: ECHM_PONAB (Enoyl-CoA hydratase, mitochondrial OS=Pongo abelii GN=ECHS1 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.497e-20
Identity = 65/194 (33.51%), Postives = 101/194 (52.06%), Query Frame = 2
Query:   35 SYKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 616
            +++ I  E +  N+ V  + LNRP   NAL      E  +AL   +++P V AIVL+G    F +G D+K + +++          +S KF +      D +T I   +KPVIA+++G   GGG ++   CDI +  + A F+  E+ +      G  QRL   VG   AME+ LTG R    +AK+ GLVS++
Sbjct:   32 NFEYIIAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQALKIFEEDPAVGAIVLTGGDKAFAAGADIKEMQNLSFQDC------YSSKFLKH----WDHLTQI---KKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRTVGKSLAMEMVLTGDRISAQDAKQAGLVSKI 212          
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: ECHH_RHIME (Probable enoyl-CoA hydratase OS=Rhizobium meliloti GN=fadB1 PE=3 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.554e-20
Identity = 68/205 (33.17%), Postives = 101/205 (49.27%), Query Frame = 2
Query:   35 SYKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGV 649
            SY+++ +E +    RV  + LNRP   NAL+     E   AL + D +  V AIVL+G+   F +G D+K +  +           F + +  D  FL      +   RKP+IA++ G  +GGG ++   CD    S+ A F   E+ L +   +G  QRL   VG   AM+L LTGR     EA+  GLVSRV      L++ +
Sbjct:    2 SYETLLVETQ---GRVGLITLNRPQALNALNAVLMRELDAALKAFDADRAVGAIVLAGSEKAFAAGADIKEMQGLD----------FVDGYLAD--FL-GGWEHVANARKPMIAAVSGFALGGGCELAMMCDFIIASETAKFGQPEITLGVIPGMGGSQRLTRAVGKAKAMDLILTGRMMDAAEAERSGLVSRVVAPDRLLEEAL 190          
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: FADB_BACSU (Probable enoyl-CoA hydratase OS=Bacillus subtilis GN=fadB PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.431e-20
Identity = 59/168 (35.12%), Postives = 86/168 (51.19%), Query Frame = 2
Query:  116 NALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTST---DRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVS 610
            NALS     E    L   + +  V +I++ G G  F +G D+K  +S+  +  S+   +RG             Q  +  IE   KP+IA+IHGA +GGG+++  AC IR  ++DA   + E++L I       QRLP  VG   A+EL  +G    G EA +LGLVS
Sbjct:   23 NALSSRILEELSSCLDQCETDAGVRSIIIHGEGRFFSAGADIKEFTSLKGNEDSSLLAERG-------------QQLMERIESFPKPIIAAIHGAALGGGLELAMACHIRIAAEDAKLGLPELNLGIIPGFAGTQRLPRYVGTAKALELIGSGEPISGKEALDLGLVS 177          
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: ECHD2_HUMAN (Enoyl-CoA hydratase domain-containing protein 2, mitochondrial OS=Homo sapiens GN=ECHDC2 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.162e-19
Identity = 61/192 (31.77%), Postives = 93/192 (48.44%), Query Frame = 2
Query:   68 PNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 640
            P+  +  + +NRPS RNAL   F +E  + L+ L ++  V  ++  SG    FC+G DLK    +++             F + +R L + + A      P IA++ G  +GGG+++  ACD+R  +  A   + E    +    G  QRLP  +G   A EL  TGRR  G EA  LGLV+     + E D
Sbjct:   38 PDQGITEILMNRPSARNALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGADLKEREQMSEAEVGV--------FVQRLRGLMNDIAAFPA---PTIAAMDGFALGGGLELALACDLRVAASSAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGTEAHVLGLVNHAVAQNEEGD 218          
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: CRT_CLOAB (3-hydroxybutyryl-CoA dehydratase OS=Clostridium acetobutylicum GN=crt PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.817e-19
Identity = 66/201 (32.84%), Postives = 101/201 (50.25%), Query Frame = 2
Query:   77 RVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDH-FCSGIDLKTLSSVTDHTTSTDRGRF-----SEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVKLVA 661
            +V  + +NRP   NAL+ +   E    +  ++ +  V A++L+G G+  F +G D+  +  +     +T  GR      ++ FRR           +E   KPVIA+++G  +GGG +I  +CDIR  S +A F   EV L IT   G  QRL  +VG G A +L  T +     EA  +GLV++V   S EL    K +A
Sbjct:   13 KVAVVTINRPKALNALNSDTLKEMDYVIGEIENDSEVLAVILTGAGEKSFVAGADISEMKEM-----NTIEGRKFGILGNKVFRR-----------LELLEKPVIAAVNGFALGGGCEIAMSCDIRIASSNARFGQPEVGLGITPGFGGTQRLSRLVGMGMAKQLIFTAQNIKADEALRIGLVNKVVEPS-ELMNTAKEIA 196          
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: AUHM_MOUSE (Methylglutaconyl-CoA hydratase, mitochondrial OS=Mus musculus GN=Auh PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.216e-19
Identity = 64/191 (33.51%), Postives = 92/191 (48.17%), Query Frame = 2
Query:   71 NSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 640
            N  ++ L +NR   +NALS+       KA+ +L  +  V  I++ S     FC+G DLK  + +     S++ G F  K R         +  I     P IA+I G  +GGG+++  ACDIR  +  A   + E  LAI    G  QRLP  +G   A EL  + R   G EAK +GL+S V   + E D
Sbjct:   61 NRGIVVLGINRAYGKNALSKNLLKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMH----SSEVGPFVSKIR-------SVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGQEAKAVGLISHVLEQNQEGD 240          
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: AUHM_HUMAN (Methylglutaconyl-CoA hydratase, mitochondrial OS=Homo sapiens GN=AUH PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.216e-19
Identity = 66/212 (31.13%), Postives = 103/212 (48.58%), Query Frame = 2
Query:    8 FTSAKQMEESYKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD 640
            ++S  + E+  +   +E +  N  ++ L +NR   +N+LS+       KA+ +L  +  V  I++ S     FC+G DLK  + ++    S++ G F  K R         +  I     P IA+I G  +GGG+++  ACDIR  +  A   + E  LAI    G  QRLP  +G   A EL  + R   G EAK +GL+S V   + E D
Sbjct:   67 YSSEMKTEDELRVRHLEEE--NRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMS----SSEVGPFVSKIRA-------VINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGD 265          
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: FADJ_SHESW (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain W3-18-1) GN=fadJ PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.073e-18
Identity = 59/187 (31.55%), Postives = 95/187 (50.80%), Query Frame = 2
Query:  116 NALSREFFTEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVKLVAEG 667
            N L  +F  E  + L+ +  +P++  +VL SG  D F +G D+  L +     T+ D    S++              +E  + PV+A+IHGAC+GGG+++  AC  R CS D      V EV L +    G  QRLP +VG   A+++ LTG++    +A ++GLV+ V   +  L   V++   G
Sbjct:   27 NTLKAQFGPEISEILAEIKSDPHIRGLVLISGKKDSFVAGADISMLDACK---TAGDAKALSQQGHV-------VFNELEALKIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRSKQALKMGLVNDVVPQTILLQTAVEMALTG 203          
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: ECHA_MOUSE (Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus GN=Hadha PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.073e-18
Identity = 65/209 (31.10%), Postives = 111/209 (53.11%), Query Frame = 2
Query:    2 AFFTSAKQMEESYKSIKIEGKTPNSRVIYLYLNRPSQR-NALSREFFTEFPKALSSLDQNPNV-NAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 616
            +F TS+  +  ++ +  ++G      V  + +N P+ + N L++E  +EF + ++ +  N  + +A+++S     F +G D+  LSS T   T  +  R S++ +R    L       E+  KPV+A+I G+C+GGG+++  AC  R  +KD      V EV L I    G  QRLP +VG   A ++ LTGR      AK++GLV ++
Sbjct:   28 SFTTSSALLTRTHINYGVKGD-----VAVIRINSPNSKVNTLNKEVQSEFIEVMNEIWANDQIRSAVLISSKPGCFVAGADINMLSSCT---TPQEATRISQEGQRMFEKL-------EKSPKPVVAAISGSCLGGGLELAIACQYRIATKDRKTVLGVPEVLLGILPGAGGTQRLPKMVGVPAAFDMMLTGRNIRADRAKKMGLVDQL 221          
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: AUHM_DICDI (Methylglutaconyl-CoA hydratase, mitochondrial OS=Dictyostelium discoideum GN=auh PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.073e-18
Identity = 66/214 (30.84%), Postives = 101/214 (47.20%), Query Frame = 2
Query:    8 FTSAKQMEESYKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDH-FCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQG 646
            FT+  Q E   +  ++EG+  N  +  +  NR   +NAL +    +F   L+ L   P+   +++    D  FCSG DLK  + ++    S           + +  L+ + T +E  + P IA+I G  +GGG ++V ACD R  SK +   + E  LAI    G  QRLP ++G   A EL  TG       A E+GLV       YE ++G
Sbjct:   37 FTTETQQECILE--RLEGE--NKGISVISFNRGHVKNALGKNLMNQFRSHLNELRFCPDTRVVIVRSLVDGVFCSGADLKERALMSQVEAS-----------QFVHSLRSSFTELETLQMPTIAAIEGVAVGGGTEMVLACDFRVASKSSKMGLPETGLAIIPGAGGTQRLPRLIGIPRAKELIFTGAILDSKRALEIGLV------QYETEKG 229          
The following BLAST results are available for this feature:
BLAST of CN181782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 200
Match NameE-valueIdentityDescription
ECHM_PONAB1.497e-2033.51Enoyl-CoA hydratase, mitochondrial OS=Pongo abelii... [more]
ECHH_RHIME2.554e-2033.17Probable enoyl-CoA hydratase OS=Rhizobium meliloti... [more]
FADB_BACSU7.431e-2035.12Probable enoyl-CoA hydratase OS=Bacillus subtilis ... [more]
ECHD2_HUMAN2.162e-1931.77Enoyl-CoA hydratase domain-containing protein 2, m... [more]
CRT_CLOAB4.817e-1932.843-hydroxybutyryl-CoA dehydratase OS=Clostridium ac... [more]
AUHM_MOUSE8.216e-1933.51Methylglutaconyl-CoA hydratase, mitochondrial OS=M... [more]
AUHM_HUMAN8.216e-1931.13Methylglutaconyl-CoA hydratase, mitochondrial OS=H... [more]
FADJ_SHESW1.073e-1831.55Fatty acid oxidation complex subunit alpha OS=Shew... [more]
ECHA_MOUSE1.073e-1831.10Trifunctional enzyme subunit alpha, mitochondrial ... [more]
AUHM_DICDI1.073e-1830.84Methylglutaconyl-CoA hydratase, mitochondrial OS=D... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001H13_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001H13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181782 ID=CN181782; Name=CN181782; organism=Citrus sinensis; type=EST; length=693bp
GGCCTTTTTCACATCAGCCAAACAGATGGAAGAGAGTTACAAATCGATAA
AAATCGAGGGAAAAACTCCAAATTCTCGAGTCATTTATCTGTATCTTAAC
CGTCCATCGCAACGCAACGCACTATCACGTGAATTCTTCACTGAATTCCC
TAAGGCCTTATCTTCCCTCGACCAAAATCCTAACGTCAACGCCATCGTCC
TCTCAGGCACCGGCGACCACTTCTGCTCCGGAATCGATCTGAAAACACTA
AGTTCGGTCACCGACCATACCACTTCCACCGACCGCGGCCGCTTCTCCGA
GAAGTTCCGGCGAGATATCAGGTTCTTGCAGGATGCGGTAACTGCCATCG
AGCGATGTCGGAAGCCAGTCATCGCATCTATCCACGGGGCGTGTATCGGA
GGCGGCGTCGATATTGTCACTGCCTGTGATATTCGGTTCTGTTCAAAAGA
TGCTTTTTTTTCGGTCAAAGAGGTTGACTTGGCTATCACGGCAGATCTCG
GGACTTTACAGAGGCTTCCGGCGATTGTCGGGTATGGTAACGCGATGGAA
TTGGCGTTGACGGGTCGTAGGTTTTGGGGTTTGGAGGCTAAGGAGTTGGG
TCTGGTTTCTCGGGTTTTCGGGACGAGTTATGAATTGGATCAGGGTGTCA
AGCTTGTTGCCGAGGGAAATTGCTGAAAAATCTCCTCTTGCCG
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