CN181782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: ECHA_RAT (Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus GN=Hadha PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.401e-18 Identity = 63/209 (30.14%), Postives = 110/209 (52.63%), Query Frame = 2 Query: 2 AFFTSAKQMEESYKSIKIEGKTPNSRVIYLYLNRPSQR-NALSREFFTEFPKALSSLDQNPNV-NAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 616 +F TS+ + ++ + ++G V + +N P+ + N L++E +EF + ++ + N + +A+++S F +G D+ L+S T T + R S++ Q +E+ KPV+A+I G+C+GGG+++ AC R +KD V EV L I G QRLP +VG A ++ LTGR AK++GLV ++ Sbjct: 28 SFTTSSALLSRTHINYGVKGD-----VAVIRINSPNSKVNTLNKEVQSEFVEVMNEIWANDQIRSAVLISSKPGCFVAGADINMLASCT---TPQEAARISQEG-------QKMFEKLEKSPKPVVAAISGSCLGGGLELAIACQYRIATKDRKTVLGVPEVLLGILPGAGGTQRLPKMVGVPAAFDMMLTGRNIRADRAKKMGLVDQL 221
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: FADJ_SHEPC (Fatty acid oxidation complex subunit alpha OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=fadJ PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18 Identity = 59/187 (31.55%), Postives = 95/187 (50.80%), Query Frame = 2 Query: 116 NALSREFFTEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVKLVAEG 667 N L +F E + L+ + +P++ +VL SG D F +G D+ L + T+ D S++ +E + PV+A+IHGAC+GGG+++ AC R CS D V EV L + G QRLP +VG A+++ LTG++ +A ++GLV+ V + L V++ G Sbjct: 27 NTLKAQFGPEISEILAEIKSDPHIRGLVLISGKKDSFVAGADISMLDACK---TAGDAKALSQQGHV-------VFNELEALKIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAG 203
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: FADJ_ENT38 (Fatty acid oxidation complex subunit alpha OS=Enterobacter sp. (strain 638) GN=fadJ PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18 Identity = 57/183 (31.15%), Postives = 90/183 (49.18%), Query Frame = 2 Query: 116 NALSREFFTEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDA--FFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVKL 655 N L EF + L + N N+ ++ +S D+F +G D+ ++ + + R ++ +I L PVIA+IHGAC+GGG+++ AC R C+ DA + EV L + G QRLP +VG A+E+ LTG++ +A ++GLV V S L V+L Sbjct: 29 NTLKAEFGVQVRSILKQVRDNKNIRGLIFISAKSDNFIAGADINMIARAKSAQEAEELARQGQQIMAEIHGLSI----------PVIAAIHGACLGGGLELALACHSRVCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRPRQALKVGLVDEVVPHSILLTAAVEL 201
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: FADJ_PHOLL (Fatty acid oxidation complex subunit alpha OS=Photorhabdus luminescens subsp. laumondii GN=fadJ PE=3 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.391e-18 Identity = 61/195 (31.28%), Postives = 95/195 (48.72%), Query Frame = 2 Query: 95 LNRPSQR-NALSREFFTEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVKLVAEG 667 +N P ++ N L EF +F Q+ + ++L SG D F +G D+ S + T D +EK Q + I PV+A+IHGAC+GGG+++ AC R CS+D + EV L + G QRLP ++G +A+++ LTG++ +A LGLV LD ++ V +G Sbjct: 36 INVPGEKVNTLKAEFVDQFLNVFKQAQQSSGLKGLILISGKPDTFIAGADI---SMIAGCKTKEDARDLAEKG-------QKLFSQIANYPLPVVAAIHGACLGGGLELALACHWRVCSQDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSSALDIMLTGKQLRAKQALRLGLVDDAVPLDILLDIAIEKVKKG 220
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: FADJ_CITK8 (Fatty acid oxidation complex subunit alpha OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=fadJ PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.122e-18 Identity = 56/187 (29.95%), Postives = 93/187 (49.73%), Query Frame = 2 Query: 116 NALSREFFTEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDA--FFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVKLVAEG 667 N L EF T+ L + +N + +V +S D+F +G D+ + + + R ++ +I+ L PV+A+IHGAC+GGG+++ AC R C+ DA + EV L + G QRLP +VG A+++ LTG++ +A +GLV V + L+ V+L +G Sbjct: 29 NTLKAEFATQVRAILKQIRENKALRGVVFISAKPDNFIAGADINMIGNCKSAQEAETLARQGQQIMAEIQALS----------VPVVAAIHGACLGGGLEMALACHRRICTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRPKQALRVGLVDEVVPHAILLEAAVELAIKG 205
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: FADJ_SHESR (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain MR-7) GN=fadJ PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.078e-18 Identity = 60/187 (32.09%), Postives = 94/187 (50.27%), Query Frame = 2 Query: 116 NALSREFFTEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVKLVAEG 667 N L EF E + LS + ++ ++ +VL SG D F +G D+ L + T+ D S++ +E PV+A+IHGAC+GGG+++ AC R CS D V EV L + G QRLP +VG A+++ LTG++ +A ++GLV+ V + L V++ G Sbjct: 27 NTLKAEFGPEISEILSEIKRDSSIRGLVLISGKKDSFVAGADISMLDACQ---TAGDAKALSQQGHV-------VFNELEALNIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAG 203
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: FADJ_SHESM (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain MR-4) GN=fadJ PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.078e-18 Identity = 60/187 (32.09%), Postives = 94/187 (50.27%), Query Frame = 2 Query: 116 NALSREFFTEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVKLVAEG 667 N L EF E + LS + ++ ++ +VL SG D F +G D+ L + T+ D S++ +E PV+A+IHGAC+GGG+++ AC R CS D V EV L + G QRLP +VG A+++ LTG++ +A ++GLV+ V + L V++ G Sbjct: 27 NTLKAEFGPEISEILSEIKRDSSIRGLVLISGKKDSFVAGADISMLDACQ---TAGDAKALSQQGHV-------VFNELEALNIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAG 203
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: FADJ_SHESA (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain ANA-3) GN=fadJ PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.078e-18 Identity = 60/187 (32.09%), Postives = 94/187 (50.27%), Query Frame = 2 Query: 116 NALSREFFTEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVKLVAEG 667 N L EF E + LS + ++ ++ +VL SG D F +G D+ L + T+ D S++ +E PV+A+IHGAC+GGG+++ AC R CS D V EV L + G QRLP +VG A+++ LTG++ +A ++GLV+ V + L V++ G Sbjct: 27 NTLKAEFGPEISEILSEIKRDSSIRGLVLISGKKDSFVAGADISMLDACQ---TAGDAKALSQQGHV-------VFNELEALNIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAG 203
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: FADJ_SHEON (Fatty acid oxidation complex subunit alpha OS=Shewanella oneidensis GN=fadJ PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.078e-18 Identity = 60/187 (32.09%), Postives = 94/187 (50.27%), Query Frame = 2 Query: 116 NALSREFFTEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVKLVAEG 667 N L EF E + LS + ++ ++ +VL SG D F +G D+ L + T+ D S++ +E PV+A+IHGAC+GGG+++ AC R CS D V EV L + G QRLP +VG A+++ LTG++ +A ++GLV+ V + L V++ G Sbjct: 29 NTLKAEFGPEISEILSEIKRDSSIRGLVLISGKKDSFVAGADISMLDACQ---TAGDAKALSQQGHV-------VFNELEALNIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAG 205
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: FADJ_PHOPR (Fatty acid oxidation complex subunit alpha OS=Photobacterium profundum GN=fadJ PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.078e-18 Identity = 61/200 (30.50%), Postives = 101/200 (50.50%), Query Frame = 2 Query: 80 VIYLYLNRPSQR-NALSREFFTEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVKLVAEG 667 V +L ++ P++R N L F + L+ L ++ +V+ SG D+F +G D++ L++ T+ + + + K Q+ +E V+A+IHG C+GGG+++ AC R CS D + EV L + G QRLP ++G NA+++ LTG++ +AK LGLV S LD K +G Sbjct: 23 VAWLKIDVPNERMNTLQSAFVDQVTDVLAQLKDKKDIKGMVVYSGKPDNFIAGADIRMLAACQ---TADEAQQLAAKG-------QELFGQLEALPFHVVAAIHGPCLGGGLELALACHSRVCSDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVANALDMILTGKQLRAKKAKNLGLVEEAVPLSILLDIAEKQALKG 212 The following BLAST results are available for this feature:
BLAST of CN181782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181782 ID=CN181782; Name=CN181782; organism=Citrus sinensis; type=EST; length=693bpback to top |