CN181782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: FADJ_SHIFL (Fatty acid oxidation complex subunit alpha OS=Shigella flexneri GN=fadJ PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17 Identity = 56/183 (30.60%), Postives = 90/183 (49.18%), Query Frame = 2 Query: 116 NALSREFFTEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVKL 655 N L EF ++ + L +N + +V +S D+F +G D+ + + + R ++ +I L PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP ++G A+E+ LTG++ +A +LGLV V S L+ V+L Sbjct: 29 NTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEAAVEL 201
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: FADJ_SHIF8 (Fatty acid oxidation complex subunit alpha OS=Shigella flexneri serotype 5b (strain 8401) GN=fadJ PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17 Identity = 56/183 (30.60%), Postives = 90/183 (49.18%), Query Frame = 2 Query: 116 NALSREFFTEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVKL 655 N L EF ++ + L +N + +V +S D+F +G D+ + + + R ++ +I L PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP ++G A+E+ LTG++ +A +LGLV V S L+ V+L Sbjct: 29 NTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEINALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEAAVEL 201
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: FADJ_SHEB8 (Fatty acid oxidation complex subunit alpha OS=Shewanella baltica (strain OS185) GN=fadJ PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17 Identity = 58/187 (31.02%), Postives = 93/187 (49.73%), Query Frame = 2 Query: 116 NALSREFFTEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVKLVAEG 667 N L +F E + L+ + + ++ +VL SG D F +G D+ L + T+ D S++ +E PV+A+IHGAC+GGG+++ AC R CS D V EV L + G QRLP +VG A+++ LTG++ +A ++GLV+ V + L V++ G Sbjct: 27 NTLKAQFGPEISEILAEIKSDSSIRGLVLISGKKDSFVAGADISMLDACK---TAGDAKALSQQGHV-------VFNELEALTIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKKIRPKQALKMGLVNDVVPQTILLQTAVEMALAG 203
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: FADJ_KLEP3 (Fatty acid oxidation complex subunit alpha OS=Klebsiella pneumoniae (strain 342) GN=fadJ PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17 Identity = 60/216 (27.78%), Postives = 106/216 (49.07%), Query Frame = 2 Query: 32 ESYKSIKIEGKTPNSRVIYLYLNRPSQR-NALSREFFTEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVKLVAEG 667 ++ + K+E + ++ + ++ P ++ N L EF + + + + +V +V +S D+F +G D+ ++ R R +++ R Q + I PVIA+IHGAC+GGG+++ AC R CS D + EV L + G QRLP ++G A+++ LTGR+ +A + GLV V + L V+L +G Sbjct: 2 DTVSAFKLEVRA--DKIAVITIDAPGEKMNTLKAEFGNQVRGLIRQVRDDKSVRGVVFISAKTDNFIAGADINMIA----------RCRSAQEAEALARQGQQIMAEIHGLSIPVIAAIHGACLGGGLELALACHGRICSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGRQLRARQALKAGLVDEVVPQAILLQAAVELALKG 205
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: FADJ_ECOHS (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O9:H4 (strain HS) GN=fadJ PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17 Identity = 56/183 (30.60%), Postives = 90/183 (49.18%), Query Frame = 2 Query: 116 NALSREFFTEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVKL 655 N L EF ++ + L +N + +V +S D+F +G D+ + + + R ++ +I L PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP ++G A+E+ LTG++ +A +LGLV V S L+ V+L Sbjct: 29 NTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEAAVEL 201
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: FADJ_SHIB3 (Fatty acid oxidation complex subunit alpha OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=fadJ PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17 Identity = 56/183 (30.60%), Postives = 90/183 (49.18%), Query Frame = 2 Query: 116 NALSREFFTEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVKL 655 N L EF ++ + L +N + +V +S D+F +G D+ + + + R ++ +I L PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP ++G A+E+ LTG++ +A +LGLV V S L+ V+L Sbjct: 29 NTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEVAVEL 201
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: FADJ_SHEB5 (Fatty acid oxidation complex subunit alpha OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=fadJ PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17 Identity = 58/187 (31.02%), Postives = 93/187 (49.73%), Query Frame = 2 Query: 116 NALSREFFTEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVKLVAEG 667 N L +F E + L+ + + ++ +VL SG D F +G D+ L + T+ D S++ +E PV+A+IHGAC+GGG+++ AC R CS D V EV L + G QRLP +VG A+++ LTG++ +A ++GLV+ V + L V++ G Sbjct: 27 NTLKAQFGPEISEILADIKSDSSIRGLVLISGKKDSFVAGADISMLDACK---TAGDAKALSQQGHV-------VFNELEALTIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAG 203
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: FADJ_SALTY (Fatty acid oxidation complex subunit alpha OS=Salmonella typhimurium GN=fadJ PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17 Identity = 55/183 (30.05%), Postives = 90/183 (49.18%), Query Frame = 2 Query: 116 NALSREFFTEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVKL 655 N L EF T+ L + +N + +V +S D+F +G D+ + + + R ++ +I+ L PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP +VG A+++ LTG++ +A + GLV V + L+ V+L Sbjct: 29 NTLKAEFATQVRAILKQIRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALP----------VPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQTILLEAAVEL 201
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: FADJ_ECOL5 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=fadJ PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17 Identity = 56/186 (30.11%), Postives = 91/186 (48.92%), Query Frame = 2 Query: 116 NALSREFFTEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVKLVAE 664 N L EF ++ + L +N + +V +S D+F +G D+ + + + R ++ +I L PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP ++G A+E+ LTG++ +A +LGLV V S L+ V+L + Sbjct: 29 NTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVDDVVPHSILLEAAVELAKQ 204
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: FADJ_ECO81 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O81 (strain ED1a) GN=fadJ PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17 Identity = 56/186 (30.11%), Postives = 91/186 (48.92%), Query Frame = 2 Query: 116 NALSREFFTEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVKLVAE 664 N L EF ++ + L +N + +V +S D+F +G D+ + + + R ++ +I L PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP ++G A+E+ LTG++ +A +LGLV V S L+ V+L + Sbjct: 29 NTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVDDVVPHSILLEAAVELAKQ 204 The following BLAST results are available for this feature:
BLAST of CN181782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181782 ID=CN181782; Name=CN181782; organism=Citrus sinensis; type=EST; length=693bpback to top |