CN181781
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: FADJ_SALPK (Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi A (strain AKU_12601) GN=fadJ PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.691e-12 Identity = 40/109 (36.70%), Postives = 62/109 (56.88%), Query Frame = -3 Query: 387 PVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLV-AEGIAEKS 704 PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP +VG A+++ L G++ +A + GLV V + L+ V L E +A+++ Sbjct: 103 PVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILIGKQLRARQALKAGLVDDVVPQTILLEAAVELAKKERLAQRT 211
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: FADJ_SALPA (Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi A GN=fadJ PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.691e-12 Identity = 40/109 (36.70%), Postives = 62/109 (56.88%), Query Frame = -3 Query: 387 PVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLV-AEGIAEKS 704 PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP +VG A+++ L G++ +A + GLV V + L+ V L E +A+++ Sbjct: 103 PVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILIGKQLRARQALKAGLVDDVVPQTILLEAAVELAKKERLAQRT 211
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: FADJ_ESCF3 (Fatty acid oxidation complex subunit alpha OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=fadJ PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.515e-12 Identity = 38/97 (39.18%), Postives = 55/97 (56.70%), Query Frame = -3 Query: 420 PVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGV 704 PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP +VG A+++ LTG++ +A + GLV + S L V Sbjct: 103 PVIAAIHGACLGGGLELALACHGRICTDDPKTILGLPEVQLGLLPGSGGTQRLPRLVGLSTALDMILTGKQLRPGQALKSGLVDEIVPQSILLQAAV 199
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: ECH12_MYCTU (Probable enoyl-CoA hydratase echA12 OS=Mycobacterium tuberculosis GN=echA12 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.515e-12 Identity = 54/169 (31.95%), Postives = 81/169 (47.93%), Query Frame = -3 Query: 225 KPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITA-DLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAE-------GIAEKSPLAVTGTKAVLLRSRELTVEQGLDYVATWNSGMLLSDDLKEAMSSNIQKRKPVF 707 +PVIA+++G IGGG+ + A DIR S A+F ++ +TA +LG LP +G A E+ LTGR EA+ +GLVSR LD + A GI +G A L + G +V LL+ + +EA+++ ++R PVF Sbjct: 119 QPVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGLSYLLPRAIGSSRAFEIMLTGRDVSAEEAERIGLVSRQVPDEQLLDACYAIAARMAGFSRPGIELTKRTLWSGLDAASLEAHMQAEGLGQLFV------RLLTANFEEAVAARAEQRAPVF 281
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: ECH12_MYCBO (Probable enoyl-CoA hydratase echA12 OS=Mycobacterium bovis GN=echA12 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.515e-12 Identity = 54/169 (31.95%), Postives = 81/169 (47.93%), Query Frame = -3 Query: 225 KPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITA-DLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAE-------GIAEKSPLAVTGTKAVLLRSRELTVEQGLDYVATWNSGMLLSDDLKEAMSSNIQKRKPVF 707 +PVIA+++G IGGG+ + A DIR S A+F ++ +TA +LG LP +G A E+ LTGR EA+ +GLVSR LD + A GI +G A L + G +V LL+ + +EA+++ ++R PVF Sbjct: 119 QPVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGLSYLLPRAIGSSRAFEIMLTGRDVSAEEAERIGLVSRQVPDEQLLDACYAIAARMAGFSRPGIELTKRTLWSGLDAASLEAHMQAEGLGQLFV------RLLTANFEEAVAARAEQRAPVF 281
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: FADJ_VIBPA (Fatty acid oxidation complex subunit alpha OS=Vibrio parahaemolyticus GN=fadJ PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.996e-12 Identity = 36/103 (34.95%), Postives = 59/103 (57.28%), Query Frame = -3 Query: 402 PVIASIHGACIGGGVDIVTACDIRFCS--KDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEG 704 PV+A+IHG C+GGG+++ ACD R C+ + EV L + G QRLP ++G +++L LTG++ +AK+LG+V + LD + + +G Sbjct: 103 PVVAAIHGPCLGGGLELALACDYRVCTDFDKTRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAKKLGVVDACVPDTILLDVAKQFIDKG 205
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: FADJ_VIBHB (Fatty acid oxidation complex subunit alpha OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=fadJ PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.830e-12 Identity = 38/103 (36.89%), Postives = 58/103 (56.31%), Query Frame = -3 Query: 402 PVIASIHGACIGGGVDIVTACDIRFC--SKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEG 704 PV+A+IHG C+GGG+++ ACD R C S + EV L + G QRLP ++G +++L LTG++ +AK+LG+V + LD V +G Sbjct: 103 PVVAAIHGPCLGGGLELALACDYRVCTDSDKTRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAKKLGVVDACVPETVLLDIAKMHVEKG 205
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: FADJ_SHELP (Fatty acid oxidation complex subunit alpha OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=fadJ PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.023e-11 Identity = 36/103 (34.95%), Postives = 57/103 (55.34%), Query Frame = -3 Query: 402 PVIASIHGACIGGGVDIVTACDIRFC--SKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEG 704 PV+A+I+GAC+GGG+++ AC R C S + EV L + G QRLP +VG ++++ LTG++ +A ++GLV V S L + + G Sbjct: 101 PVVAAINGACLGGGLELALACHQRVCTDSNKTMLGLPEVQLGLLPGGGGTQRLPRLVGIAKSLDMMLTGKQLRAKQALKMGLVDDVVPESILLQTAIEMALAG 203
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: FADJ_ENTS8 (Fatty acid oxidation complex subunit alpha OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=fadJ PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.023e-11 Identity = 37/98 (37.76%), Postives = 54/98 (55.10%), Query Frame = -3 Query: 414 VIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRL 701 V+A+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP +VG A+E+ L G++ +A + GLV V S L+ L Sbjct: 104 VVAAIHGACLGGGLELALACHSRICTDDVKTLLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILAGKQLRPRQALKAGLVDDVVPQSILLEAAAEL 201
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: ECHA_RAT (Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus GN=Hadha PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.023e-11 Identity = 37/87 (42.53%), Postives = 52/87 (59.77%), Query Frame = -3 Query: 453 KPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 707 KPV+A+I G+C+GGG+++ AC R +KD V EV L I G QRLP +VG A ++ LTGR AK++GLV ++ Sbjct: 135 KPVVAAISGSCLGGGLELAIACQYRIATKDRKTVLGVPEVLLGILPGAGGTQRLPKMVGVPAAFDMMLTGRNIRADRAKKMGLVDQL 221 The following BLAST results are available for this feature:
BLAST of CN181781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 135
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181781 ID=CN181781; Name=CN181781; organism=Citrus sinensis; type=EST; length=712bpback to top |