CN181781
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: FADJ_PHOLL (Fatty acid oxidation complex subunit alpha OS=Photorhabdus luminescens subsp. laumondii GN=fadJ PE=3 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.601e-15 Identity = 53/175 (30.29%), Postives = 86/175 (49.14%), Query Frame = -3 Query: 216 PVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPLAVTGTKAV----------LLRSRELTVEQGLDYVATWNSGMLLSDDLKEAMSSNIQKRKPVFAKL 704 PV+A+IHGAC+GGG+++ AC R CS+D + EV L + G QRLP ++G +A+++ LTG++ +A LGLV LD + V +GI + PL V ++R + L +G Y A ++ + L++ MS ++ F +L Sbjct: 118 PVVAAIHGACLGGGLELALACHWRVCSQDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSSALDIMLTGKQLRAKQALRLGLVDDAVPLDILLDIAIEKVKKGIPVRKPLPWQQRLLVGPVGRYFLFNIVRKKTLAKTRG-HYPAPERIIEVVKEGLEKGMSQGLRAEAVAFGEL 291
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: FADJ_ERWCT (Fatty acid oxidation complex subunit alpha OS=Erwinia carotovora subsp. atroseptica GN=fadJ PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.601e-15 Identity = 47/122 (38.52%), Postives = 67/122 (54.92%), Query Frame = -3 Query: 345 PVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPLAVTGTKAVLLRS 704 PV+A+IHGAC+GGG+++ ACD R CS D + EV L + G QRLP ++G +A++L LTGR +A GLV LD V ++ +G + PL G ++ LL S Sbjct: 117 PVVAAIHGACLGGGLELALACDYRVCSLDEKTVLGLPEVQLGLLPGSGGTQRLPRLIGLDSALDLILTGRHLRAGQALRQGLVDEAVPHDILLDTAVEILKKGKRKAVPL---GWRSRLLNS 235
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: FADJ_ECOLC (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=fadJ PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.601e-15 Identity = 45/112 (40.18%), Postives = 63/112 (56.25%), Query Frame = -3 Query: 375 PVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPLAV 704 PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP ++G A+E+ LTG++ +A +LGLV V S L+ V LV + PL V Sbjct: 103 PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEAAVELVKQDRPSSRPLPV 214
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: ECHD2_MOUSE (Enoyl-CoA hydratase domain-containing protein 2, mitochondrial OS=Mus musculus GN=Echdc2 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.397e-15 Identity = 50/163 (30.67%), Postives = 81/163 (49.69%), Query Frame = -3 Query: 225 PVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVR---LVAEGIAEKSPLAVTGTKAVLLRSRELTVEQGLDYVATWNSGMLLSDDLKEAMSSNIQKRKPVF 704 P IA++ G +GGG+++ ACD+R + A + E + G QRLP +G A EL TGRR G +A+ELGLV+ + E + +A+ I ++P+AV K + R E+ + G+ + + + D E M++ +KR P F Sbjct: 131 PTIAAMDGFALGGGLELALACDLRIAASSAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLNGAQARELGLVNHAVAQNEEGNAAYHRALALAQEILPQAPIAVRLGKVAIDRGMEVDIASGMAIEQMCYAQNIPTQDRLEGMAAFREKRAPKF 293
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: FADJ_ECOLU (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=fadJ PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.436e-15 Identity = 44/112 (39.29%), Postives = 62/112 (55.36%), Query Frame = -3 Query: 375 PVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPLAV 704 PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP ++G A+E+ LTG++ +A +LGLV V S L+ V L + PL V Sbjct: 103 PVIAAIHGACLGGGLELALACHGRMCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPQSILLEAAVELAKQDRPSSRPLPV 214
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: FADJ_SHEAM (Fatty acid oxidation complex subunit alpha OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadJ PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.794e-15 Identity = 52/165 (31.52%), Postives = 82/165 (49.70%), Query Frame = -3 Query: 240 PVIASIHGACIGGGVDIVTACDIRFCSKDA--FFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPL---AVTGTKAVLLRSRELTVEQGLDYV-----ATWNSGMLLSDDLKEAMSSNIQK 704 PV+A+IHGAC+GGG+++ AC R CS + V EV L + G QRLP ++G A++L LTG++ +A ++GLV V S LD + + G + PL VT R + +Q V + S + + D ++E M+ ++K Sbjct: 101 PVVAAIHGACLGGGLELALACHQRVCSDSSKTMLGVPEVQLGLLPGGGGTQRLPRLIGIAKALDLMLTGKQVRPKQAVKMGLVDDVVPESILLDTAIEMALAGKKTRKPLKQPLVTKLLEGTPVGRNIMFDQATKQVLKKTQGNYPSPLKIIDCVREGMAKGMEK 265
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: FADJ_ECOUT (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain UTI89 / UPEC) GN=fadJ PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.567e-15 Identity = 44/112 (39.29%), Postives = 62/112 (55.36%), Query Frame = -3 Query: 375 PVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPLAV 704 PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP ++G A+E+ LTG++ +A +LGLV V S L+ V L + PL V Sbjct: 103 PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVDDVVPHSILLEAAVELAKQDRPSSRPLPV 214
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: FADJ_ECOL6 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O6 GN=fadJ PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.567e-15 Identity = 44/112 (39.29%), Postives = 62/112 (55.36%), Query Frame = -3 Query: 375 PVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPLAV 704 PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP ++G A+E+ LTG++ +A +LGLV V S L+ V L + PL V Sbjct: 103 PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEAAVELAKQDRPSSRPLPV 214
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: FADJ_ECOL5 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=fadJ PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.567e-15 Identity = 44/112 (39.29%), Postives = 62/112 (55.36%), Query Frame = -3 Query: 375 PVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPLAV 704 PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP ++G A+E+ LTG++ +A +LGLV V S L+ V L + PL V Sbjct: 103 PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVDDVVPHSILLEAAVELAKQDRPSSRPLPV 214
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: FADJ_ECOK1 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O1:K1 / APEC GN=fadJ PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.567e-15 Identity = 44/112 (39.29%), Postives = 62/112 (55.36%), Query Frame = -3 Query: 375 PVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPLAV 704 PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP ++G A+E+ LTG++ +A +LGLV V S L+ V L + PL V Sbjct: 103 PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVDDVVPHSILLEAAVELAKQDRPSSRPLPV 214 The following BLAST results are available for this feature:
BLAST of CN181781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 135
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181781 ID=CN181781; Name=CN181781; organism=Citrus sinensis; type=EST; length=712bpback to top |