CN181781
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: FADJ_ECODH (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain K12 / DH10B) GN=fadJ PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.366e-14 Identity = 43/111 (38.74%), Postives = 61/111 (54.95%), Query Frame = -3 Query: 375 VIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPLAV 701 VIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP ++G A+E+ LTG++ +A +LGLV V S L+ V L + PL V Sbjct: 104 VIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEAAVELAKKERPSSRPLPV 214
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: FADJ_ECOBW (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain K12 / BW2952) GN=fadJ PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.366e-14 Identity = 43/111 (38.74%), Postives = 61/111 (54.95%), Query Frame = -3 Query: 375 VIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPLAV 701 VIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP ++G A+E+ LTG++ +A +LGLV V S L+ V L + PL V Sbjct: 104 VIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEAAVELAKKERPSSRPLPV 214
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: FADJ_VIBVY (Fatty acid oxidation complex subunit alpha OS=Vibrio vulnificus (strain YJ016) GN=fadJ PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13 Identity = 53/177 (29.94%), Postives = 88/177 (49.72%), Query Frame = -3 Query: 216 PVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPLAVTGTKAVLLRS---RELTVEQGL---------DYVATWNSGMLLSDDLKEAMSSNIQKRKPVFAKL 704 PV+A+IHG C+GGG+++ ACD R CS D + EV L + G QRLP ++G +++L LTG++ +AK+LG+V + LD + V +G +++ VT + +L S R+ EQ +Y AT ++ L++ M ++ F +L Sbjct: 103 PVVAAIHGPCLGGGLELALACDFRVCSDDDATRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAKKLGVVDACVPQTILLDVAKQFVEKG-KKRAKQKVTTKEKLLSGSGLGRKFVFEQAAKKTHEKTRGNYPATVAILQVIQHGLEKGMKQGLELEAKRFGEL 278
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: FADJ_SHESA (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain ANA-3) GN=fadJ PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13 Identity = 50/165 (30.30%), Postives = 81/165 (49.09%), Query Frame = -3 Query: 240 PVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPLAVTGTKAVLLRS---RELTVEQGLDYVATWNSG-----MLLSDDLKEAMSSNIQK 704 PV+A+IHGAC+GGG+++ AC R CS D V EV L + G QRLP +VG A+++ LTG++ +A ++GLV+ V + L V + G P+ + +L + R + +Q V G + D +++ M+ +QK Sbjct: 101 PVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKRTAKPVKKSLVNQLLEGTGFGRNIIFDQAAKQVVKKTQGNYPAPAKIIDCVRQGMAKGMQK 265
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: FADJ_SHEB5 (Fatty acid oxidation complex subunit alpha OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=fadJ PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13 Identity = 43/119 (36.13%), Postives = 64/119 (53.78%), Query Frame = -3 Query: 354 PVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPLAVTGTKAVL 704 PV+A+IHGAC+GGG+++ AC R CS D V EV L + G QRLP +VG A+++ LTG++ +A ++GLV+ V + L V + G P+ + VL Sbjct: 101 PVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKRAPKPVKKSLVNQVL 219
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: FADJ_VIBVU (Fatty acid oxidation complex subunit alpha OS=Vibrio vulnificus GN=fadJ PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.427e-13 Identity = 53/177 (29.94%), Postives = 88/177 (49.72%), Query Frame = -3 Query: 216 PVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPLAVTGTKAVLLRS---RELTVEQGL---------DYVATWNSGMLLSDDLKEAMSSNIQKRKPVFAKL 704 PV+A+IHG C+GGG+++ ACD R CS D + EV L + G QRLP ++G +++L LTG++ +AK+LG+V + LD + V +G +++ VT + +L S R+ EQ +Y AT ++ L++ M ++ F +L Sbjct: 103 PVVAAIHGPCLGGGLELALACDFRVCSDDDATRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRANKAKKLGVVDACVPQTILLDVAKQFVEKG-KKRAKQKVTTKEKLLSGSGLGRKFVFEQAAKKTHEKTRGNYPATVAILQVIQHGLEKGMKQGLELEAKRFGEL 278
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: AUHM_MOUSE (Methylglutaconyl-CoA hydratase, mitochondrial OS=Mus musculus GN=Auh PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.427e-13 Identity = 51/161 (31.68%), Postives = 77/161 (47.83%), Query Frame = -3 Query: 231 PVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRL---VAEGIAEKSPLAVTGTKAVLLRSRELTVEQGLDYVATWNSGMLLSDDLKEAMSSNIQKRKP 704 P IA+I G +GGG+++ ACDIR + A + E LAI G QRLP +G A EL + R G EAK +GL+S V + E D R +A + P+A+ K + + E+ + GL + + + D E + + +KR P Sbjct: 149 PTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGQEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTISTKDRLEGLLAFKEKRPP 309
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: FADJ_SHEON (Fatty acid oxidation complex subunit alpha OS=Shewanella oneidensis GN=fadJ PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.864e-13 Identity = 50/165 (30.30%), Postives = 82/165 (49.70%), Query Frame = -3 Query: 240 PVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPLAVTGTKAVLLRS---RELTVEQGLDYVATWNSG-----MLLSDDLKEAMSSNIQK 704 PV+A+IHGAC+GGG+++ AC R CS D V EV L + G QRLP +VG A+++ LTG++ +A ++GLV+ V + L V + G P+ + +L + R + +Q VA G + D +++ ++ +QK Sbjct: 103 PVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKQIAKPVKKSLVNQLLEGTGFGRNIIFDQAAKQVAKKTQGNYPAPAKIIDCVRQGIAKGMQK 267
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: CRT_CLODI (3-hydroxybutyryl-CoA dehydratase (Fragment) OS=Clostridium difficile GN=crt PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.864e-13 Identity = 52/153 (33.99%), Postives = 80/153 (52.29%), Query Frame = -3 Query: 252 RKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPLAVTGTKAVLLRSRELTVEQGLDYVATWNSGMLLSDDLKEAMSS 710 +K VIA+++G +GG ++ ACDIR S A F EV L IT G QRL +VG A EL TG+ EA+++GLV+RV +++ V +A+ IA+ + LAV +K + + + G+D + + D KE + S Sbjct: 3 KKVVIAAVNGFALGG-CELAMACDIRIASAKAKFGQPEVTLGITPGYGGTQRLTRLVGMAKAKELIFTGQVIKADEAEKIGLVNRVVEPDILIEE-VEKLAKIIAKNAQLAVRYSKEAIQLGAQTDINTGIDIESNLFGLCFSTKDQKEGIVS 153
BLAST of CN181781 vs. ExPASy Swiss-Prot
Match: AUHM_HUMAN (Methylglutaconyl-CoA hydratase, mitochondrial OS=Homo sapiens GN=AUH PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.864e-13 Identity = 51/161 (31.68%), Postives = 77/161 (47.83%), Query Frame = -3 Query: 231 PVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRL---VAEGIAEKSPLAVTGTKAVLLRSRELTVEQGLDYVATWNSGMLLSDDLKEAMSSNIQKRKP 704 P IA+I G +GGG+++ ACDIR + A + E LAI G QRLP +G A EL + R G EAK +GL+S V + E D R +A + P+A+ K + + E+ + GL + + + D E + + +KR P Sbjct: 174 PTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPP 334 The following BLAST results are available for this feature:
BLAST of CN181781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 135
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181781 ID=CN181781; Name=CN181781; organism=Citrus sinensis; type=EST; length=712bpback to top |