CN188721

Overview
NameCN188721
Unique NameCN188721
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5755 contig Csv1_Contig5755:332..1104. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188721 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.509e-30
Identity = 67/135 (49.63%), Postives = 88/135 (65.19%), Query Frame = -3
Query:  323 IIPEVDVCKSDPWDLPGDVA---QERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKKRGAKSE 718
            +I ++D+ K DPWDLP       +E YFFS R+ KYPNG+R NR  GSGYWKATG DK I T+ G + VG+KK LVFY GK P G++T+WIMHEYRL+  + +              D+WVLCRI+ K  G++ +
Sbjct:   45 VIGDIDLYKFDPWDLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDK-IITADGRR-VGIKKALVFYAGKAPKGTKTNWIMHEYRLIEHSRSHGSSKL--------DDWVLCRIYKKTSGSQRQ 169          
BLAST of CN188721 vs. ExPASy Swiss-Prot
Match: NA102_ARATH (NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.277e-30
Identity = 69/148 (46.62%), Postives = 92/148 (62.16%), Query Frame = -3
Query:  341 ESARFFAC------PLPASIIPEVDVCKSDPWDLPGDVA---QERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKK 757
            E  +F+ C      P+   +I E+D+ K +PW+LP       +E YFFS R+ KYPNG+R NRA G+GYWKATG DK I   +    +G+KK LVFY GK P G +T+WIMHEYRL   AN  +  +  +   +  D+WVLCRI+ KK
Sbjct:   62 ELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALYGEKEWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPK---TLGIKKALVFYAGKAPKGIKTNWIMHEYRL---ANVDRSASTNKKNNLRLDDWVLCRIYNKK 203          
BLAST of CN188721 vs. ExPASy Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.731e-29
Identity = 63/136 (46.32%), Postives = 90/136 (66.18%), Query Frame = -3
Query:  344 FACPLPASIIPEVDVCKSDPWDLPGDVA---QERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLK 742
            F+C    + I +VD+ KS+PW+LP       +E YFF+ R+ KYP G R+NRAT +GYWKATG D++I +S+   ++GMKKTLVFY+G+ P G ++ W+MHEYRL        K ++    + A D WVLC++ LK
Sbjct:   47 FSC----AAISQVDLNKSEPWELPEKAKMGEKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGEKSCWVMHEYRL------DGKFSYHYISSSAKDEWVLCKVCLK 172          
BLAST of CN188721 vs. ExPASy Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.070e-29
Identity = 64/146 (43.84%), Postives = 89/146 (60.96%), Query Frame = -3
Query:  326 SARFFACPLPASIIPEVDVCKSDPWDLPGDVA---QERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKKRGAKS 754
            +++ F   L    I EVD+ + +PW+LP       +E YF+S R+ KYP G R+NRAT +GYWKATG DK++ +  G Q+VGMKKTLVFY+G+ P G +T W+MHEYRL         +N         + WV+CR+F K    K+
Sbjct:   41 ASKIFHGGLSGIHISEVDLNRCEPWELPEMAKMGEREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLKTKWVMHEYRL---------ENDHSHRHTCKEEWVICRVFNKTGDRKN 177          
BLAST of CN188721 vs. ExPASy Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.348e-28
Identity = 66/138 (47.83%), Postives = 88/138 (63.77%), Query Frame = -3
Query:  323 IPEVDVCKSDPWDLPGDVA---QERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIF----LKKRGAKSE 715
            I EVD+ K +PW LPG      +E YFFS R+ KYP G R+NRAT +GYWKATG D++I +S+   +VGMKKTLVFY+G+ P G +++W+MHEYRL        K ++      + D WV+ R+F    L   GA SE
Sbjct:   49 IAEVDLNKCEPWQLPGRAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKSNWVMHEYRL------EGKFSYHFISRSSKDEWVISRVFQKTTLASTGAVSE 180          
BLAST of CN188721 vs. ExPASy Swiss-Prot
Match: NAC43_ARATH (NAC domain-containing protein 43 OS=Arabidopsis thaliana GN=NAC043 PE=2 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.165e-27
Identity = 76/195 (38.97%), Postives = 109/195 (55.90%), Query Frame = -3
Query:  215 IIPEVDVCKSDPWDLP-----GDVAQ-ERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAV-----ATDNWVLCRIFLKKRGAKSEDEETCTEIGGTRANG----PKPV------------FYDFMRKEERADLNLVP 718
            +I +VD+ K +PWD+      G   Q + YFFS ++ KYP G R+NRAT +G+WKATG DK I  S G +I GM+KTLVFY+G+ PHG ++DWIMHEYRL     +P+     +  ++       + WV+CRIF KK   K+ +    + +GG   +G    PK              F + M +  + +LNL P
Sbjct:   47 VIRDVDLNKLEPWDIQEMCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDK-IIYSNGRRI-GMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNIISPEDVTVHEVVSIIGEASQDEGWVVCRIFKKKNLHKTLN----SPVGGASLSGGGDTPKTTSSQIFNEDTLDQFLELMGRSCKEELNLDP 235          
BLAST of CN188721 vs. ExPASy Swiss-Prot
Match: NAC77_ORYSJ (NAC domain-containing protein 77 OS=Oryza sativa subsp. japonica GN=NAC77 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.522e-27
Identity = 63/144 (43.75%), Postives = 88/144 (61.11%), Query Frame = -3
Query:  335 IPEVDVCKSDPWDLPGDVA---QERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQI--------------ATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKKRG 715
            I EVD+ K +PWDLP       +E YFFS ++ KYP G R+NRAT  GYWKATG D++I              ++++  Q+VGMKKTLVFY G+ P G++T+W+MHE+RL    +A    +         D WV+C++F KK+G
Sbjct:   51 IGEVDLNKCEPWDLPSKAKMGEKEWYFFSHKDMKYPTGMRTNRATKEGYWKATGKDREIFRQPAAVNTSSYGGSSNKKKQLVGMKKTLVFYMGRAPKGTKTNWVMHEFRL----HANLHNHHPNLRLNPKDEWVVCKVFHKKQG 190          
BLAST of CN188721 vs. ExPASy Swiss-Prot
Match: NAC76_ORYSJ (NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica GN=NAC76 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 5.784e-27
Identity = 63/132 (47.73%), Postives = 80/132 (60.61%), Query Frame = -3
Query:  341 IIPEVDVCKSDPWDLPGDVA------QERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKK 718
            +I E+D+ K +PWDL            E YFFS ++ KYP G R+NRAT +G+WKATG DK I  +   +I GM+KTLVFY G+ PHG +TDWIMHEYRL                 V  D WV+CR+F+KK
Sbjct:   41 VIREIDLNKLEPWDLKDRCRIGTGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIFLANACRI-GMRKTLVFYVGRAPHGKKTDWIMHEYRL-----------DQDNVDVQEDGWVVCRVFMKK 160          
BLAST of CN188721 vs. ExPASy Swiss-Prot
Match: NAC74_ORYSJ (NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.865e-27
Identity = 64/127 (50.39%), Postives = 81/127 (63.78%), Query Frame = -3
Query:  353 IIPEVDVCKSDPWDLPG--DVAQER---YFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRI 718
            IIPEVD+ K +PWDLP   DV  +    +FF+ R+ KYPNG+RSNRAT +GYWK+TG D+  A   G Q +G KKTLVF+ G+PP G RT+WIMHEY +         +   Q      D +VLCRI
Sbjct:   40 IIPEVDIYKHEPWDLPAKCDVPTQDNKWHFFAARDRKYPNGSRSNRATVAGYWKSTGKDR--AIKMGKQTIGTKKTLVFHEGRPPTGRRTEWIMHEYYI--------DERECQACPDMKDAYVLCRI 156          
BLAST of CN188721 vs. ExPASy Swiss-Prot
Match: NAC66_ARATH (NAC domain-containing protein 66 OS=Arabidopsis thaliana GN=NAC066 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.288e-26
Identity = 63/142 (44.37%), Postives = 91/142 (64.08%), Query Frame = -3
Query:  326 IIPEVDVCKSDPWDLP-----GDVAQ-ERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRL----VTAANAPQKKNFAQTPAVATD-NWVLCRIFLKKRGAKS 718
            +IP++D+ K +PWD+      G   Q + YF+S ++ KYP G R+NRAT  G+WKATG DK I T+ G++I GM+KTLVFY+G+ PHG ++DWIMHEYRL    + ++      N      + +D  WV+CR+F K    K+
Sbjct:   42 VIPDIDLNKLEPWDIQEMCKIGTTPQNDWYFYSHKDKKYPTGTRTNRATTVGFWKATGRDKTIYTN-GDRI-GMRKTLVFYKGRAPHGQKSDWIMHEYRLDESVLISSCGDHDVNVETCDVIGSDEGWVVCRVFKKNNLCKN 181          
The following BLAST results are available for this feature:
BLAST of CN188721 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
NAC72_ARATH2.509e-3049.63NAC domain-containing protein 72 OS=Arabidopsis th... [more]
NA102_ARATH3.277e-3046.62NAC domain-containing protein 102 OS=Arabidopsis t... [more]
NAC54_ARATH4.731e-2946.32Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thal... [more]
NAC31_ARATH8.070e-2943.84Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thal... [more]
NAC98_ARATH2.348e-2847.83Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thal... [more]
NAC43_ARATH1.165e-2738.97NAC domain-containing protein 43 OS=Arabidopsis th... [more]
NAC77_ORYSJ1.522e-2743.75NAC domain-containing protein 77 OS=Oryza sativa s... [more]
NAC76_ORYSJ5.784e-2747.73NAC domain-containing protein 76 OS=Oryza sativa s... [more]
NAC74_ORYSJ9.865e-2750.39NAC domain-containing protein 74 OS=Oryza sativa s... [more]
NAC66_ARATH1.288e-2644.37NAC domain-containing protein 66 OS=Arabidopsis th... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0006K09_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006K09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188721 ID=CN188721; Name=CN188721; organism=Citrus sinensis; type=EST; length=774bp
TTGATGATGATGGCTAATTGGGTATTCTGATTTTTCTACCCTTAAAGGCC
AATTACTTGTACAGAACACTAATTAAAAAGCTTTAAATTATTGAAAATGT
TTACTGCTGTTTTCTTCTAAAGTAAGGGAAGCTATTGCAACTACTCTCTT
CATGATCGTCTGATTCATTTGAAGAAACTTCAGTGACTCCACTTGAGCCT
GAGGAAGATGAAGTTGGAACAAGGTTCAAGTCAGCCCTTTCCTCCTTTCT
CATAAAATCATAAAAAACCGGCTTGGGCCCGTTAGCCCTGGTTCCTCCAA
TTTCGGTGCACGTTTCCTCATCCTCACTCTTGGCTCCTCTTTTCTTCAAA
AAGATGCGGCATAGAACCCAATTGTCCGTTGCCACAGCTGGGGTCTGGGC
GAAGTTTTTCTTTTGAGGGGCATTGGCAGCAGTAACAAGGCGGTATTCAT
GCATGATCCAATCAGTCCTAGAGCCGTGTGGTGGCTTGCCTCTATAAAAA
ACGAGAGTTTTTTTCATTCCCACGATTTGGTTGCCCCTGGAAGTCGCAAT
TTGCTTGTCAAGCCCAGTTGCCTTCCAATAACCAGACCCCGTGGCCCTGT
TCGATCTGTTCCCGTTTGGGTACTTAGCTTCCCTTGTGCTGAAAAAATAC
CTCTCTTGCGCCACATCACCTGGCAAATCCCAAGGATCAGACTTGCAAAC
ATCAACTTCAGGAATTATGGAAGCGGGCAAGGGGCAGGCAAAAAATCTTG
CGCTTTCAGTACTGAACAACAAGT
back to top