CN181774
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181774 vs. ExPASy Swiss-Prot
Match: RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.408e-16 Identity = 43/130 (33.08%), Postives = 71/130 (54.62%), Query Frame = 2 Query: 71 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKNRQ 457 + Q +DY FK+V++GD GK+ + R EF + TIGVE ++ WDTAGQE++ + YY A++++D+T R T+ ++P W +L NI I+L GNK D+++++ Sbjct: 8 ASQKIDYV-FKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQR 136
BLAST of CN181774 vs. ExPASy Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.408e-16 Identity = 42/119 (35.29%), Postives = 67/119 (56.30%), Query Frame = 2 Query: 98 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN 451 FKLV++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT R T++N W ++L NI ++L GNK D+++ Sbjct: 14 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRH 132
BLAST of CN181774 vs. ExPASy Swiss-Prot
Match: RAB18_RAT (Ras-related protein Rab-18 OS=Rattus norvegicus GN=Rab18 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.408e-16 Identity = 47/140 (33.57%), Postives = 75/140 (53.57%), Query Frame = 2 Query: 95 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV--LCGNKVDVKNRQVKAKQ-VTFHRKKNLQY 505 + K++I+G+ G GK++ + R F+ + TIGV+ + K + WDTAGQE+F L YY Q I+++DVT R T+ + W +L C IV L GNK+D +NR+V + + F RK ++ + Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLF 147
BLAST of CN181774 vs. ExPASy Swiss-Prot
Match: RAB18_PONAB (Ras-related protein Rab-18 OS=Pongo abelii GN=RAB18 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.408e-16 Identity = 47/140 (33.57%), Postives = 75/140 (53.57%), Query Frame = 2 Query: 95 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV--LCGNKVDVKNRQVKAKQ-VTFHRKKNLQY 505 + K++I+G+ G GK++ + R F+ + TIGV+ + K + WDTAGQE+F L YY Q I+++DVT R T+ + W +L C IV L GNK+D +NR+V + + F RK ++ + Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLF 147
BLAST of CN181774 vs. ExPASy Swiss-Prot
Match: RAB18_MOUSE (Ras-related protein Rab-18 OS=Mus musculus GN=Rab18 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 3.408e-16 Identity = 47/140 (33.57%), Postives = 75/140 (53.57%), Query Frame = 2 Query: 95 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV--LCGNKVDVKNRQVKAKQ-VTFHRKKNLQY 505 + K++I+G+ G GK++ + R F+ + TIGV+ + K + WDTAGQE+F L YY Q I+++DVT R T+ + W +L C IV L GNK+D +NR+V + + F RK ++ + Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLF 147
BLAST of CN181774 vs. ExPASy Swiss-Prot
Match: RAB18_HUMAN (Ras-related protein Rab-18 OS=Homo sapiens GN=RAB18 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.408e-16 Identity = 47/140 (33.57%), Postives = 75/140 (53.57%), Query Frame = 2 Query: 95 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV--LCGNKVDVKNRQVKAKQ-VTFHRKKNLQY 505 + K++I+G+ G GK++ + R F+ + TIGV+ + K + WDTAGQE+F L YY Q I+++DVT R T+ + W +L C IV L GNK+D +NR+V + + F RK ++ + Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLF 147
BLAST of CN181774 vs. ExPASy Swiss-Prot
Match: RAB18_CHICK (Ras-related protein Rab-18 OS=Gallus gallus GN=RAB18 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.408e-16 Identity = 47/140 (33.57%), Postives = 75/140 (53.57%), Query Frame = 2 Query: 95 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV--LCGNKVDVKNRQVKAKQ-VTFHRKKNLQY 505 + K++I+G+ G GK++ + R F+ + TIGV+ + K + WDTAGQE+F L YY Q I+++DVT R T+ + W +L C IV L GNK+D +NR+V + + F RK ++ + Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVKMLVGNKIDKENREVDRNEGLKFARKHSMLF 147
BLAST of CN181774 vs. ExPASy Swiss-Prot
Match: RAB18_BOVIN (Ras-related protein Rab-18 OS=Bos taurus GN=RAB18 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.408e-16 Identity = 47/140 (33.57%), Postives = 75/140 (53.57%), Query Frame = 2 Query: 95 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV--LCGNKVDVKNRQVKAKQ-VTFHRKKNLQY 505 + K++I+G+ G GK++ + R F+ + TIGV+ + K + WDTAGQE+F L YY Q I+++DVT R T+ + W +L C IV L GNK+D +NR+V + + F RK ++ + Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLF 147
BLAST of CN181774 vs. ExPASy Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.408e-16 Identity = 42/119 (35.29%), Postives = 69/119 (57.98%), Query Frame = 2 Query: 98 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN 451 FK+V++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT R T++NV W ++L + NI ++L GNK D+++ Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRH 132
BLAST of CN181774 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.451e-16 Identity = 43/126 (34.13%), Postives = 70/126 (55.56%), Query Frame = 2 Query: 98 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKNRQVKAKQ 472 FK+V++GD G GK+ + R EF + + TIGVE ++ WDTAGQE++ + YY A++++D+T R T+ NV W R+L NI I++ GNK D+K+ + +++ Sbjct: 13 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLRAVSEE 138 The following BLAST results are available for this feature:
BLAST of CN181774 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181774 ID=CN181774; Name=CN181774; organism=Citrus sinensis; type=EST; length=507bpback to top |