CN181774
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181774 vs. ExPASy Swiss-Prot
Match: RAB9A_MOUSE (Ras-related protein Rab-9A OS=Mus musculus GN=Rab9a PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.132e-19 Identity = 47/141 (33.33%), Postives = 77/141 (54.61%), Query Frame = 2 Query: 98 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-----CRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQY 505 FK++++GDGG GK++ + R++T +F+ + TIGVE D + + WDTAGQE+F LR +Y C ++ F V +++N+ W ++ + E+ P V+ GNK D+K RQV ++ K N Y Sbjct: 8 FKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKTDIKERQVSTEEAQAWCKDNGDY 148
BLAST of CN181774 vs. ExPASy Swiss-Prot
Match: RAB9A_HUMAN (Ras-related protein Rab-9A OS=Homo sapiens GN=RAB9A PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 7.337e-19 Identity = 45/141 (31.91%), Postives = 77/141 (54.61%), Query Frame = 2 Query: 98 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-----CRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQY 505 FK++++GDGG GK++ + R++T +F+ + TIGVE D + + WDTAGQE+F LR +Y C ++ F V +++N+ W ++ + E+ P V+ GNK+D+ RQV ++ + N Y Sbjct: 8 FKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDISERQVSTEEAQAWCRDNGDY 148
BLAST of CN181774 vs. ExPASy Swiss-Prot
Match: RAB9A_CANFA (Ras-related protein Rab-9A OS=Canis familiaris GN=RAB9A PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 7.337e-19 Identity = 45/141 (31.91%), Postives = 77/141 (54.61%), Query Frame = 2 Query: 98 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-----CRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQY 505 FK++++GDGG GK++ + R++T +F+ + TIGVE D + + WDTAGQE+F LR +Y C ++ F V +++N+ W ++ + E+ P V+ GNK+D+ RQV ++ + N Y Sbjct: 8 FKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDISERQVSTEEAQAWCRDNGDY 148
BLAST of CN181774 vs. ExPASy Swiss-Prot
Match: RAB9B_PONAB (Ras-related protein Rab-9B OS=Pongo abelii GN=RAB9B PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.788e-18 Identity = 46/140 (32.86%), Postives = 77/140 (55.00%), Query Frame = 2 Query: 101 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQY 505 K++++GDGG GK++ + R++T +F+ + TIGVE D + + WDTAGQE+F LR +Y C ++ F V R +++N+ W ++ E+ P V+ GNKVD ++RQV ++ +N Y Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKVDKEDRQVTTEEAQAWCMENGDY 148
BLAST of CN181774 vs. ExPASy Swiss-Prot
Match: RAB9B_HUMAN (Ras-related protein Rab-9B OS=Homo sapiens GN=RAB9B PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.788e-18 Identity = 46/140 (32.86%), Postives = 77/140 (55.00%), Query Frame = 2 Query: 101 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQY 505 K++++GDGG GK++ + R++T +F+ + TIGVE D + + WDTAGQE+F LR +Y C ++ F V R +++N+ W ++ E+ P V+ GNKVD ++RQV ++ +N Y Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKVDKEDRQVTTEEAQTWCMENGDY 148
BLAST of CN181774 vs. ExPASy Swiss-Prot
Match: RBH1C_ARATH (Ras-related protein RABH1C OS=Arabidopsis thaliana GN=RABH1C PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 6.211e-18 Identity = 49/128 (38.28%), Postives = 70/128 (54.69%), Query Frame = 2 Query: 98 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVD-VKNRQVKAKQ 472 FKLV +GD GKT+ + R + +F+ Y+PTIG++ + +R WDTAGQE+F L Y AI+++DV+ R T+ N W D+ R N+ IVL GNK D V+ RQV + Sbjct: 10 FKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVEKRQVSISE 137
BLAST of CN181774 vs. ExPASy Swiss-Prot
Match: RAB9B_MOUSE (Ras-related protein Rab-9B OS=Mus musculus GN=Rab9b PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 6.211e-18 Identity = 45/140 (32.14%), Postives = 77/140 (55.00%), Query Frame = 2 Query: 101 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQY 505 K++++GDGG GK++ + R++T +F+ + TIGVE D + + WDTAGQE+F LR +Y C ++ F V R +++N+ W ++ ++ P V+ GNKVD ++RQV ++ +N Y Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPDHFPFVVLGNKVDKEDRQVTTEEAQAWCMENGNY 148
BLAST of CN181774 vs. ExPASy Swiss-Prot
Match: RAB23_HUMAN (Ras-related protein Rab-23 OS=Homo sapiens GN=RAB23 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.060e-17 Identity = 44/130 (33.85%), Postives = 71/130 (54.62%), Query Frame = 2 Query: 95 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVD------VKNRQVKA 466 + K+V+VG+G GK++ ++R+ G F K Y+ TIGV+ N +R WDTAGQE+F + YY Q +++F T R +++ V +W + +IP VL NK+D +KN + +A Sbjct: 9 AIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGDIPTVLVQNKIDLLDDSCIKNEEAEA 138
BLAST of CN181774 vs. ExPASy Swiss-Prot
Match: RACC_ENTHI (Rho-related protein racC OS=Entamoeba histolytica GN=RACC PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.384e-17 Identity = 48/129 (37.21%), Postives = 71/129 (55.04%), Query Frame = 2 Query: 95 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPT-WHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVT 478 S KLV+VGDG GKT + + T EF K Y PT+ + + + +I+ WDTAGQE++ LR Y +I F VT+ ++Y NV T WH ++ +PI+L G K+D +N K++T Sbjct: 7 SIKLVVVGDGAVGKTCLLICYTTNEFPKDYIPTV-FDNYVVSLTAGTRQIQLALWDTAGQEEYDQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEVIHFAPKVPIILVGTKLDTRNDPAIVKRLT 134
BLAST of CN181774 vs. ExPASy Swiss-Prot
Match: RAB7A_DICDI (Ras-related protein Rab-7A OS=Dictyostelium discoideum GN=rab7A PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.360e-17 Identity = 39/129 (30.23%), Postives = 74/129 (57.36%), Query Frame = 2 Query: 101 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAKQ 472 K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+F L +Y C ++ +DV T++N+ +W + R +N P V+ GNK+D++N++V +++ Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKELMVDDRVVTMQIWDTAGQERFQSLGVAFYRGADCCVLCYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPFVVLGNKIDLENQRVVSQK 138 The following BLAST results are available for this feature:
BLAST of CN181774 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181774 ID=CN181774; Name=CN181774; organism=Citrus sinensis; type=EST; length=507bpback to top |