CN181772

Overview
NameCN181772
Unique NameCN181772
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length631
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4313 contig Csv1_Contig4313:167..796. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181772 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 8.984e-35
Identity = 71/163 (43.56%), Postives = 104/163 (63.80%), Query Frame = -1
Query:  140 LVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIP-AADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 625
            +VDVGG  G  +  ++ +HP I  GIN+DLP V++EAP  PGV H+GGDMF S+P   DAI MKW+L  W+D+ C  +++NCY ALP  GK++  E VLP+ S+ + R + +   D+ +M  +   GK R E+EF++L  +AGF   +A Y+      +EF K
Sbjct:  208 VVDVGGGVGATVAAVVSRHPHI-RGINYDLPHVISEAPPFPGVEHVGGDMFASVPRGGDAILMKWILHDWSDEHCARLLKNCYDALPEHGKVVVVECVLPESSDATAREQGVFHVDM-IMLAHNPGGKERYEREFRELARAAGFTGFKATYIYANAWAIEFTK 368          
BLAST of CN181772 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 8.984e-35
Identity = 71/162 (43.83%), Postives = 103/162 (63.58%), Query Frame = -1
Query:  140 LVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 625
            LVDVGG  G  +  I+ K+P I +GINFDLP V+A+AP+ PGV ++GGDMF S+P ADA+FMKW+   W+D+ C   ++NCY ALP  GK+I  E +LP   + S  T+ ++  D+ +M  +   GK RT++EF+ L   AGF         +   ++EF+K
Sbjct:  203 LVDVGGGTGAVVSTIVSKYPSI-KGINFDLPHVIADAPAFPGVENVGGDMFVSVPKADAVFMKWICHDWSDEHCLTFLKNCYDALPENGKVILVECILPVAPDTSLATKGVMHVDV-IMLAHNPGGKERTDREFESLARGAGFKGFEVMCCAFNTHVIEFRK 362          
BLAST of CN181772 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 8.984e-35
Identity = 74/164 (45.12%), Postives = 101/164 (61.59%), Query Frame = -1
Query:  140 KRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 631
            K +VDVGG  G  L MI+ K+P I +GINFDLP VV +APS PGV H+GGDMF S+P  DAIFMKW+   W+D  C   ++ CY+ALP  GK+I  E VLP+  +    T+ ++  D+ +M  +   GK RTE+EF+ L  ++GF         Y   ++E  K
Sbjct:  200 KTVVDVGGGTGATLNMIISKYPSI-KGINFDLPHVVEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDAHCVKFLKKCYEALPENGKVILAECVLPEAPDTGLATKNVVHIDV-IMLAHNPGGKERTEKEFQVLAKASGFKQFNKVCCAYNSWIMELLK 361          
BLAST of CN181772 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 8.984e-35
Identity = 74/162 (45.68%), Postives = 102/162 (62.96%), Query Frame = -1
Query:  140 LVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 625
            +VDVGG  G  + MI+ K+P I +GINFDLP V+ +AP  PGV H+GGDMF S+P  DAIFMKW+   W+D+ C   ++NCY ALP  GK+I  E +LP   + S  T+ ++  D+ VM  +   GK RTEQEF+ L   +GF  +R     +   ++EF K
Sbjct:  204 IVDVGGGTGAVVNMIVSKYPSI-KGINFDLPHVIEDAPQYPGVQHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDTSLATKGVVHIDV-VMLAHNPGGKERTEQEFEALAKGSGFQGIRVACNAFNTYVIEFLK 363          
BLAST of CN181772 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 8.984e-35
Identity = 73/162 (45.06%), Postives = 101/162 (62.35%), Query Frame = -1
Query:  140 LVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 625
            LVDVGG  G  +  I+ K+P I +GINFDLP V+ +APS PGV H+GGDMF S+P ADA+FMKW+   W+D  C   ++NCY ALP  GK+I  E +LP   + S  T+ ++  D+ +M  +   GK RTE+EF+ L   AGF         +   ++EF+K
Sbjct:  204 LVDVGGGTGAVVNTIVSKYPSI-KGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDV-IMLAHNPGGKERTEKEFEGLAKGAGFQGFEVMCCAFNTHVIEFRK 363          
BLAST of CN181772 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.173e-34
Identity = 74/162 (45.68%), Postives = 100/162 (61.73%), Query Frame = -1
Query:  140 LVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 625
            +VDVGG  G  L MI+ K+P I +GINFDLP V+ +AP  PGV H+GGDMF S+P  DAIFMKW+   W+D+ C   ++NCY ALP  GK+I  E +LP   + S  T+ ++  D+ +M  +   GK RTEQEF+ L   AGF         +   ++EF K
Sbjct:  204 VVDVGGGTGAVLNMIVSKYPSI-KGINFDLPHVIEDAPQYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDSSLATKGVVHIDV-IMLAHNPGGKERTEQEFQALAKGAGFQGFNVACSAFNTYVIEFLK 363          
BLAST of CN181772 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.173e-34
Identity = 73/162 (45.06%), Postives = 101/162 (62.35%), Query Frame = -1
Query:  140 LVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 625
            +VDVGG  G  L MI+ K+P I +GINFDLP V+ +AP  PGV H+GGDMF S+P  DAIFMKW+   W+D+ C   ++NCY ALP  GK+I  E +LP   + S  T+ ++  D  +M  +   GK RTE+EF+ L + AGF   +     +   ++EF K
Sbjct:  209 IVDVGGGTGAVLSMIVAKYPSI-KGINFDLPHVIEDAPIYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPEHGKVIVAECILPLSPDPSLATKGVIHIDA-IMLAHNPGGKERTEKEFEALAIGAGFKGFKVACCAFNTYVMEFLK 368          
BLAST of CN181772 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.532e-34
Identity = 69/145 (47.59%), Postives = 97/145 (66.90%), Query Frame = -1
Query:  197 KRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGF 631
            K LVDVGG  G  L MI  KH  + +GINFDLP V+A+A +  G+ H+GGDMF+S+P  DAIFMKW+L  W+D  C  +++NCYK+LP  GK+I  E +LP+  + +  T+ ++  D+ +M  +   GK RTE+EF+ L   AGF
Sbjct:  193 KTLVDVGGGTGASLNMITSKHKSL-KGINFDLPHVIADATTYQGIEHVGGDMFESVPKGDAIFMKWILHDWSDAHCLQVLKNCYKSLPENGKVIVAECILPEAPDTTPATQNVIHIDV-IMLAHNPGGKERTEKEFEALAKGAGF 335          
BLAST of CN181772 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.532e-34
Identity = 73/162 (45.06%), Postives = 101/162 (62.35%), Query Frame = -1
Query:  140 LVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 625
            LVDVGG  G  +  I+ K+P I +GINFDLP V+ +APS PGV H+GGDMF S+P ADA+FMKW+   W+D  C   ++NCY ALP  GK+I  E +LP   + S  T+ ++  D+ +M  +   GK RTE+EF+ L   AGF         +   ++EF+K
Sbjct:  204 LVDVGGGTGAVVNTIVSKYPSI-KGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPNADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDV-IMLAHNPGGKERTEKEFEGLANGAGFQGFEVMCCAFNTHVIEFRK 363          
BLAST of CN181772 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.414e-34
Identity = 71/162 (43.83%), Postives = 103/162 (63.58%), Query Frame = -1
Query:  140 LVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 625
            LVDVGG  G  +  I+ K+P I +GINFDLP V+A+AP+ PGV ++GGDMF S+P ADA+FMKW+   W+D+ C  +++NCY ALP  GK+I  E +LP   + S  T+ ++  D  +M  +   GK RT++EF+ L   AGF         +   ++EF+K
Sbjct:  203 LVDVGGGTGAVVSTIVSKYPSI-KGINFDLPHVIADAPAFPGVENVGGDMFVSVPKADAVFMKWICHDWSDEHCLRLLKNCYDALPENGKVILVECILPVAPDTSLATKGVMHVDA-IMLAHNPGGKERTDKEFEGLARGAGFKGFEVMCCAFNTHVIEFRK 362          
The following BLAST results are available for this feature:
BLAST of CN181772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
OMT1_ORYSJ8.984e-3543.56Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
COMT2_POPTM8.984e-3543.83Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT2_OCIBA8.984e-3545.12Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_ROSCH8.984e-3545.68Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_POPTM8.984e-3545.06Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_PRUDU1.173e-3445.68Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_CLABR1.173e-3445.06Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_ZINEL1.532e-3447.59Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
COMT1_POPKI1.532e-3445.06Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT3_POPKI3.414e-3443.83Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001H08_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181772 ID=CN181772; Name=CN181772; organism=Citrus sinensis; type=EST; length=631bp
GCTTTTTTTTTTTTGGTAGGCAGCTAGCGCTAACCGCCTACTCAACATTT
ATAATTCATAGCAAGTTATTCCATCCTAGGCAACCACAGTCCATCACAAA
TATTCCCCAAGTCTTTTAAGGATCCAGAAACTAAAATTACTTTTGGAACT
CAAGAAGAGTGTGAAAATAATCGACATAAAAAGCTCTCAAGTGTGGAAAA
CCAGCAGAGAGACCAAGTTGCTTAAACTCTTGTTCAGTCCTGTGTTTACC
TTTGGCCCTGTAGATGGTCATTACAAAAATGTCCCCTTCTAAGAGAGCAC
GCGTCCTCTGACTCTCGTTTGAATCATCAGGCAGCACGGGCTCACAAGCA
ATCAGTTTTCCTCCTGCCGGAAGAGCCTTGTAACAGTTCTCCATTATCAG
CTTGCATTCATCGTCAGTCCATGTAGTTAAAACCCACTTCATAAAGATAG
CATCAGCGGCAGGAATGGACTTAAACATGTCCCCACCAATATGGGTCACT
CCAGGGATACTTGGAGCTTCGGCAACAACCTCAGGCAAATCAAAATTGAT
CCCTTCACATATAAAAGGATGTTTCTGTAAAATCATCCTCAAGCAATCAC
CTGCACTCCCACCCACATCAACCAATCGCTT
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