CN181765

Overview
NameCN181765
Unique NameCN181765
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length541
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2633 contig Csv1_Contig2633:32..572. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_CYAP8 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 8801) GN=pgk PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 9.343e-34
Identity = 70/81 (86.42%), Postives = 74/81 (91.36%), Query Frame = -2
Query:  295 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 537
            WNGPMGVFEFDKFA GTEAIA  LAEL+GKG  TIIGGGDSVAAVEKVG+ADKMSHISTGGGASLELLEGK LPG+ ALD+
Sbjct:  319 WNGPMGVFEFDKFAKGTEAIAHTLAELTGKGTITIIGGGDSVAAVEKVGVADKMSHISTGGGASLELLEGKVLPGIAALDE 399          
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_CYAP7 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 7424) GN=pgk PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.594e-33
Identity = 70/82 (85.37%), Postives = 74/82 (90.24%), Query Frame = -2
Query:  292 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 537
            WNGPMGVFEFDKFA GTEAIA  L  L+GKG TTIIGGGDSVAAVEKVG+ADKMSHISTGGGASLELLEGK LPG+ ALD+A
Sbjct:  320 WNGPMGVFEFDKFAKGTEAIAYTLETLTGKGATTIIGGGDSVAAVEKVGVADKMSHISTGGGASLELLEGKVLPGIAALDEA 401          
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_CYAP4 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=pgk PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.594e-33
Identity = 69/82 (84.15%), Postives = 76/82 (92.68%), Query Frame = -2
Query:  292 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 537
            WNGPMGVFEFDKFA GTEAIA  LA L+GKG +TIIGGGDSVAAVEKVG+A++MSHISTGGGASLELLEGK LPG++ALDDA
Sbjct:  325 WNGPMGVFEFDKFAVGTEAIAHSLAGLTGKGASTIIGGGDSVAAVEKVGVAEQMSHISTGGGASLELLEGKELPGIVALDDA 406          
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_SYNPX (Phosphoglycerate kinase OS=Synechococcus sp. (strain WH8102) GN=pgk PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.082e-33
Identity = 71/82 (86.59%), Postives = 73/82 (89.02%), Query Frame = -2
Query:  292 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 537
            WNGPMGVFEF+KFA GT AIA  LAELSGKG  TIIGGGDSVAAVEK GLADKMSHISTGGGASLELLEGK LPGV AL+DA
Sbjct:  320 WNGPMGVFEFEKFATGTNAIATTLAELSGKGCCTIIGGGDSVAAVEKAGLADKMSHISTGGGASLELLEGKVLPGVAALNDA 401          
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_ANAVT (Phosphoglycerate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=pgk PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.082e-33
Identity = 70/82 (85.37%), Postives = 74/82 (90.24%), Query Frame = -2
Query:  292 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 537
            WNGPMGVFEFDKFAAGTEAIA  LAE+   G TTIIGGGDSVAAVEKVGLAD+MSHISTGGGASLELLEGK LPG+ ALD+A
Sbjct:  319 WNGPMGVFEFDKFAAGTEAIAHTLAEIGKTGTTTIIGGGDSVAAVEKVGLADQMSHISTGGGASLELLEGKVLPGIAALDEA 400          
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_ANASP (Phosphoglycerate kinase OS=Anabaena sp. (strain PCC 7120) GN=pgk PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.082e-33
Identity = 70/82 (85.37%), Postives = 74/82 (90.24%), Query Frame = -2
Query:  292 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 537
            WNGPMGVFEFDKFAAGTEAIA  LAE+   G TTIIGGGDSVAAVEKVGLAD+MSHISTGGGASLELLEGK LPG+ ALD+A
Sbjct:  319 WNGPMGVFEFDKFAAGTEAIAHTLAEIGKTGTTTIIGGGDSVAAVEKVGLADQMSHISTGGGASLELLEGKVLPGIAALDEA 400          
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_THEEB (Phosphoglycerate kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.719e-33
Identity = 69/82 (84.15%), Postives = 76/82 (92.68%), Query Frame = -2
Query:  292 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 537
            WNGPMGVFEFD+FA GTEAIA+ LAEL+ +GV TIIGGGDSVAAVEKVG+AD+MSHISTGGGASLELLEGK LPG+ ALDDA
Sbjct:  319 WNGPMGVFEFDQFAKGTEAIARYLAELTSQGVCTIIGGGDSVAAVEKVGVADRMSHISTGGGASLELLEGKQLPGIAALDDA 400          
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_SYNS9 (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9902) GN=pgk PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 3.551e-33
Identity = 70/82 (85.37%), Postives = 73/82 (89.02%), Query Frame = -2
Query:  292 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 537
            WNGPMGVFEFDKFAAGT AIA  LAE+ GKG  TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK LPGV ALD+A
Sbjct:  320 WNGPMGVFEFDKFAAGTNAIATTLAEIGGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDNA 401          
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_MICAN (Phosphoglycerate kinase OS=Microcystis aeruginosa (strain NIES-843) GN=pgk PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 6.056e-33
Identity = 68/82 (82.93%), Postives = 75/82 (91.46%), Query Frame = -2
Query:  292 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 537
            WNGPMGVFEFDKFAAGT+AIA  LA+L+  G TTIIGGGDSVAAVEKVG+A+KMSHISTGGGASLELLEGK LPG+ ALD+A
Sbjct:  321 WNGPMGVFEFDKFAAGTDAIAHTLADLTATGTTTIIGGGDSVAAVEKVGVAEKMSHISTGGGASLELLEGKVLPGIAALDEA 402          
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_SYNP6 (Phosphoglycerate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=pgk PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.033e-32
Identity = 69/82 (84.15%), Postives = 74/82 (90.24%), Query Frame = -2
Query:  292 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 537
            WNGPMGVFEFD+FA GTEAIA+ LA L+ KG TTIIGGGDSVAAVEKVG+A +MSHISTGGGASLELLEGK LPGV ALDDA
Sbjct:  320 WNGPMGVFEFDQFAVGTEAIARSLAGLTRKGATTIIGGGDSVAAVEKVGVASEMSHISTGGGASLELLEGKVLPGVAALDDA 401          
The following BLAST results are available for this feature:
BLAST of CN181765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_CYAP89.343e-3486.42Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_CYAP71.594e-3385.37Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_CYAP41.594e-3384.15Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_SYNPX2.082e-3386.59Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_ANAVT2.082e-3385.37Phosphoglycerate kinase OS=Anabaena variabilis (st... [more]
PGK_ANASP2.082e-3385.37Phosphoglycerate kinase OS=Anabaena sp. (strain PC... [more]
PGK_THEEB2.719e-3384.15Phosphoglycerate kinase OS=Thermosynechococcus elo... [more]
PGK_SYNS93.551e-3385.37Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_MICAN6.056e-3382.93Phosphoglycerate kinase OS=Microcystis aeruginosa ... [more]
PGK_SYNP61.033e-3284.15Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001H05_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181765 ID=CN181765; Name=CN181765; organism=Citrus sinensis; type=EST; length=541bp
ATTCTGATTATCTAACATCATCAACGGCTCATTGTGATCAGAAAGGAACT
AGAACTTGACTTCAGGAAACTTATAGCCTTACCATCACAATGTTCCAAAA
TGGGATCAAATCCAGAAAAATGCATCACCATTGATGCCTGTGAGAAAGAA
TTTATTTTTACTCTTACAGCATCTACAAAACCAACTCTAATGATAAAGTT
TAACTTTTATCCACTCTGGGCTGACAACCAGCCACACATACAACTCTGGA
AATGGCACATTTAAAAAAGGAAAGTCCAGGAACTGGGTTTAAGCATCATC
AAGAGCAAGCACACCAGGGAGTGTTTTGCCCTCAAGGAGCTCTAAGCTGG
CTCCACCTCCAGTGGAGATATGGCTCATCTTGTCAGCCAGACCAACCTTC
TCTACGGCTGCAACTGAGTCACCTCCTCCAATGATTGTGGTCACTCCCTT
CCCGCTGAGCTCCGCAAGCTTCTTGGCAATTGCCTCAGTGCCAGCAGCAA
ATTTATCAAATTCAAACACACCCATAGGTCCATTCCAGCCT
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