CN181765

Overview
NameCN181765
Unique NameCN181765
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length541
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2633 contig Csv1_Contig2633:32..572. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_BEUC1 (Phosphoglycerate kinase OS=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) GN=pgk PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.495e-23
Identity = 53/82 (64.63%), Postives = 62/82 (75.61%), Query Frame = -2
Query:  295 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADK-MSHISTGGGASLELLEGKTLPGVLALDD 537
            WNGPMGVFEFD FAAGT A+A+ L + +  G  TI+GGGDS AAV  +G  +   SHISTGGGASLE LEGKTLPG+  L+D
Sbjct:  318 WNGPMGVFEFDAFAAGTRAVAQGLTDATAAGAFTIVGGGDSAAAVRSLGFDEAGFSHISTGGGASLEFLEGKTLPGLAVLED 399          
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_SYMTH (Phosphoglycerate kinase OS=Symbiobacterium thermophilum GN=pgk PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.953e-23
Identity = 53/79 (67.09%), Postives = 62/79 (78.48%), Query Frame = -2
Query:  301 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 537
            WNGPMGVFE + FA GT A+A+ +A+  G    TI+GGGDSVAAVE  GLAD+M+H+STGGGASLE LEGK LPGV  L
Sbjct:  313 WNGPMGVFEMEPFARGTFAVAQAMADCEG---VTIVGGGDSVAAVEAAGLADRMTHVSTGGGASLEFLEGKELPGVACL 388          
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_SCHMA (Phosphoglycerate kinase OS=Schistosoma mansoni GN=PGK PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.953e-23
Identity = 52/82 (63.41%), Postives = 61/82 (74.39%), Query Frame = -2
Query:  292 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 537
            WNGPMGVFE DKFA GT+A   ++ + +  G TTIIGGGD+     K    DK+SH+STGGGASLELLEGK LPGV+AL DA
Sbjct:  334 WNGPMGVFEMDKFATGTKAAMDEVVKATKNGATTIIGGGDTATCCAKWDTEDKVSHVSTGGGASLELLEGKQLPGVVALTDA 415          
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_LACS1 (Phosphoglycerate kinase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=pgk PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.953e-23
Identity = 53/81 (65.43%), Postives = 63/81 (77.78%), Query Frame = -2
Query:  295 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 537
            WNGPMGVFE   FA GT  + K L  LS    TTI+GGGDS AAV+++G+ADK++HISTGGGASLE LEGKTLPG+ A+ D
Sbjct:  321 WNGPMGVFEMSNFAKGTLEVGKFLGTLSD--ATTIVGGGDSTAAVQQLGVADKLTHISTGGGASLEYLEGKTLPGIAAVSD 399          
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_CHICK (Phosphoglycerate kinase OS=Gallus gallus GN=PGK PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 1.953e-23
Identity = 51/79 (64.56%), Postives = 62/79 (78.48%), Query Frame = -2
Query:  301 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 537
            WNGP+GVFE+DKF+ GT+A+  K+ E++GKG  TIIGGGD+     K    DK+SH+STGGGASLELLEGK LPGV AL
Sbjct:  336 WNGPVGVFEWDKFSKGTKALMDKVVEVTGKGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDAL 414          
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_MACCJ (Phosphoglycerate kinase OS=Macrococcus caseolyticus (strain JCSC5402) GN=pgk PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.550e-23
Identity = 53/81 (65.43%), Postives = 60/81 (74.07%), Query Frame = -2
Query:  295 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 537
            WNGPMGVFE   FA GT  + K +AEL  KG TTIIGGGDS AA   +G ADK +HISTGGGASLE LEGK LPG+ ++ D
Sbjct:  317 WNGPMGVFEMSNFAKGTVGVCKAIAEL--KGATTIIGGGDSAAAAMDLGFADKFTHISTGGGASLEYLEGKELPGIKSISD 395          
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_LEPBP (Phosphoglycerate kinase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=pgk PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.550e-23
Identity = 52/79 (65.82%), Postives = 63/79 (79.75%), Query Frame = -2
Query:  301 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 537
            WNGPMGVFE DKF+ GT  IAK +++   K   T++GGGDS+AAV K G+ADK++HISTGGGASLE LEG+TLPGV  L
Sbjct:  315 WNGPMGVFEMDKFSKGTIEIAKAISKSKAK---TVVGGGDSIAAVNKAGVADKITHISTGGGASLEFLEGRTLPGVQCL 390          
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_LEPBA (Phosphoglycerate kinase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=pgk PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.550e-23
Identity = 52/79 (65.82%), Postives = 63/79 (79.75%), Query Frame = -2
Query:  301 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 537
            WNGPMGVFE DKF+ GT  IAK +++   K   T++GGGDS+AAV K G+ADK++HISTGGGASLE LEG+TLPGV  L
Sbjct:  315 WNGPMGVFEMDKFSKGTIEIAKAISKSKAK---TVVGGGDSIAAVNKAGVADKITHISTGGGASLEFLEGRTLPGVQCL 390          
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_CLOB8 (Phosphoglycerate kinase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=pgk PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.550e-23
Identity = 53/81 (65.43%), Postives = 62/81 (76.54%), Query Frame = -2
Query:  295 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 537
            WNGPMGVFEF+ +  GT A+AK +A+      TTIIGGGDS AAV  +G  DKM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  314 WNGPMGVFEFENYNKGTIAVAKAMADADA---TTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKVLPGIAALND 391          
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_CARHZ (Phosphoglycerate kinase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=pgk PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.550e-23
Identity = 53/81 (65.43%), Postives = 64/81 (79.01%), Query Frame = -2
Query:  295 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 537
            WNGPMGVFE + F  GT A+A+ +AE    G  +++GGGDSVAAVEK G+ADK++HISTGGGASLE LEGK LPGV  L+D
Sbjct:  316 WNGPMGVFEVEPFDRGTVAVAEAVAE---SGALSVVGGGDSVAAVEKAGVADKITHISTGGGASLEFLEGKKLPGVEVLND 393          
The following BLAST results are available for this feature:
BLAST of CN181765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_BEUC11.495e-2364.63Phosphoglycerate kinase OS=Beutenbergia cavernae (... [more]
PGK_SYMTH1.953e-2367.09Phosphoglycerate kinase OS=Symbiobacterium thermop... [more]
PGK_SCHMA1.953e-2363.41Phosphoglycerate kinase OS=Schistosoma mansoni GN=... [more]
PGK_LACS11.953e-2365.43Phosphoglycerate kinase OS=Lactobacillus salivariu... [more]
PGK_CHICK1.953e-2364.56Phosphoglycerate kinase OS=Gallus gallus GN=PGK PE... [more]
PGK_MACCJ2.550e-2365.43Phosphoglycerate kinase OS=Macrococcus caseolyticu... [more]
PGK_LEPBP2.550e-2365.82Phosphoglycerate kinase OS=Leptospira biflexa sero... [more]
PGK_LEPBA2.550e-2365.82Phosphoglycerate kinase OS=Leptospira biflexa sero... [more]
PGK_CLOB82.550e-2365.43Phosphoglycerate kinase OS=Clostridium beijerincki... [more]
PGK_CARHZ2.550e-2365.43Phosphoglycerate kinase OS=Carboxydothermus hydrog... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001H05_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181765 ID=CN181765; Name=CN181765; organism=Citrus sinensis; type=EST; length=541bp
ATTCTGATTATCTAACATCATCAACGGCTCATTGTGATCAGAAAGGAACT
AGAACTTGACTTCAGGAAACTTATAGCCTTACCATCACAATGTTCCAAAA
TGGGATCAAATCCAGAAAAATGCATCACCATTGATGCCTGTGAGAAAGAA
TTTATTTTTACTCTTACAGCATCTACAAAACCAACTCTAATGATAAAGTT
TAACTTTTATCCACTCTGGGCTGACAACCAGCCACACATACAACTCTGGA
AATGGCACATTTAAAAAAGGAAAGTCCAGGAACTGGGTTTAAGCATCATC
AAGAGCAAGCACACCAGGGAGTGTTTTGCCCTCAAGGAGCTCTAAGCTGG
CTCCACCTCCAGTGGAGATATGGCTCATCTTGTCAGCCAGACCAACCTTC
TCTACGGCTGCAACTGAGTCACCTCCTCCAATGATTGTGGTCACTCCCTT
CCCGCTGAGCTCCGCAAGCTTCTTGGCAATTGCCTCAGTGCCAGCAGCAA
ATTTATCAAATTCAAACACACCCATAGGTCCATTCCAGCCT
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