CN181765

Overview
NameCN181765
Unique NameCN181765
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length541
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_YERPA (Phosphoglycerate kinase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=pgk PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.214e-18
Identity = 43/81 (53.09%), Postives = 60/81 (74.07%), Query Frame = -2
Query:  295 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 537
            WNGP+GVFEF  F  GTE +A+ +AE       +I GGGD++AA++  G+AD++S+ISTGGGA LE +EGK LP V+ L++
Sbjct:  306 WNGPVGVFEFPNFRKGTEIVARAIAESEA---FSIAGGGDTLAAIDLFGIADQISYISTGGGAFLEFVEGKKLPAVVMLEE 383          
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_YERP3 (Phosphoglycerate kinase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=pgk PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.214e-18
Identity = 43/81 (53.09%), Postives = 60/81 (74.07%), Query Frame = -2
Query:  295 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 537
            WNGP+GVFEF  F  GTE +A+ +AE       +I GGGD++AA++  G+AD++S+ISTGGGA LE +EGK LP V+ L++
Sbjct:  306 WNGPVGVFEFPNFRKGTEIVARAIAESEA---FSIAGGGDTLAAIDLFGIADQISYISTGGGAFLEFVEGKKLPAVVMLEE 383          
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_YERE8 (Phosphoglycerate kinase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=pgk PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.214e-18
Identity = 43/81 (53.09%), Postives = 60/81 (74.07%), Query Frame = -2
Query:  295 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 537
            WNGP+GVFEF  F  GTE +A+ +AE       +I GGGD++AA++  G+AD++S+ISTGGGA LE +EGK LP V+ L++
Sbjct:  306 WNGPVGVFEFPNFRKGTEIVARAIAESEA---FSIAGGGDTLAAIDLFGIADQISYISTGGGAFLEFVEGKKLPAVVMLEE 383          
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_XANC5 (Phosphoglycerate kinase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=pgk PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.214e-18
Identity = 46/79 (58.23%), Postives = 61/79 (77.22%), Query Frame = -2
Query:  301 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 537
            WNGP+GVFEF+ F+ GTE +A+ +A  S K  + I GGGD++AAV+K  +A ++++ISTGGGA LE LEGKTLP V AL
Sbjct:  311 WNGPVGVFEFESFSHGTETLARAIA--SSKAFS-IAGGGDTLAAVDKYDIAQEVTYISTGGGAFLEFLEGKTLPAVAAL 386          
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_STRZT (Phosphoglycerate kinase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=pgk PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.214e-18
Identity = 48/81 (59.26%), Postives = 56/81 (69.14%), Query Frame = -2
Query:  295 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 537
            WNGPMGVFE   F AGT  +   + +  G  V +IIGGGDS AA   +G ADK S ISTGGGAS+ELLEGK LPG+ AL +
Sbjct:  319 WNGPMGVFENPDFQAGTIGVMDAIVKQPG--VKSIIGGGDSAAAAINLGRADKFSWISTGGGASMELLEGKVLPGLAALTE 397          
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_STRZP (Phosphoglycerate kinase OS=Streptococcus pneumoniae (strain P1031) GN=pgk PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.214e-18
Identity = 48/81 (59.26%), Postives = 56/81 (69.14%), Query Frame = -2
Query:  295 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 537
            WNGPMGVFE   F AGT  +   + +  G  V +IIGGGDS AA   +G ADK S ISTGGGAS+ELLEGK LPG+ AL +
Sbjct:  319 WNGPMGVFENPDFQAGTIGVMDAIVKQPG--VKSIIGGGDSAAAAINLGRADKFSWISTGGGASMELLEGKVLPGLAALTE 397          
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_STRZJ (Phosphoglycerate kinase OS=Streptococcus pneumoniae (strain JJA) GN=pgk PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.214e-18
Identity = 48/81 (59.26%), Postives = 56/81 (69.14%), Query Frame = -2
Query:  295 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 537
            WNGPMGVFE   F AGT  +   + +  G  V +IIGGGDS AA   +G ADK S ISTGGGAS+ELLEGK LPG+ AL +
Sbjct:  319 WNGPMGVFENPDFQAGTIGVMDAIVKQPG--VKSIIGGGDSAAAAINLGRADKFSWISTGGGASMELLEGKVLPGLAALTE 397          
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_STRTD (Phosphoglycerate kinase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=pgk PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.214e-18
Identity = 48/81 (59.26%), Postives = 56/81 (69.14%), Query Frame = -2
Query:  295 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 537
            WNGPMGVFE   F AGT  +   + +  G  V +IIGGGDS AA   +G ADK S ISTGGGAS+ELLEGK LPG+ AL +
Sbjct:  320 WNGPMGVFENPDFQAGTIGVMDAIVKQPG--VKSIIGGGDSAAAAINLGYADKFSWISTGGGASMELLEGKELPGLAALTE 398          
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_STRT2 (Phosphoglycerate kinase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=pgk PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.214e-18
Identity = 48/81 (59.26%), Postives = 56/81 (69.14%), Query Frame = -2
Query:  295 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 537
            WNGPMGVFE   F AGT  +   + +  G  V +IIGGGDS AA   +G ADK S ISTGGGAS+ELLEGK LPG+ AL +
Sbjct:  320 WNGPMGVFENPDFQAGTIGVMDAIVKQPG--VKSIIGGGDSAAAAINLGYADKFSWISTGGGASMELLEGKELPGLAALTE 398          
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_STRT1 (Phosphoglycerate kinase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=pgk PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.214e-18
Identity = 48/81 (59.26%), Postives = 56/81 (69.14%), Query Frame = -2
Query:  295 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 537
            WNGPMGVFE   F AGT  +   + +  G  V +IIGGGDS AA   +G ADK S ISTGGGAS+ELLEGK LPG+ AL +
Sbjct:  320 WNGPMGVFENPDFQAGTIGVMDAIVKQPG--VKSIIGGGDSAAAAINLGYADKFSWISTGGGASMELLEGKELPGLAALTE 398          
The following BLAST results are available for this feature:
BLAST of CN181765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_YERPA4.214e-1853.09Phosphoglycerate kinase OS=Yersinia pestis bv. Ant... [more]
PGK_YERP34.214e-1853.09Phosphoglycerate kinase OS=Yersinia pseudotubercul... [more]
PGK_YERE84.214e-1853.09Phosphoglycerate kinase OS=Yersinia enterocolitica... [more]
PGK_XANC54.214e-1858.23Phosphoglycerate kinase OS=Xanthomonas campestris ... [more]
PGK_STRZT4.214e-1859.26Phosphoglycerate kinase OS=Streptococcus pneumonia... [more]
PGK_STRZP4.214e-1859.26Phosphoglycerate kinase OS=Streptococcus pneumonia... [more]
PGK_STRZJ4.214e-1859.26Phosphoglycerate kinase OS=Streptococcus pneumonia... [more]
PGK_STRTD4.214e-1859.26Phosphoglycerate kinase OS=Streptococcus thermophi... [more]
PGK_STRT24.214e-1859.26Phosphoglycerate kinase OS=Streptococcus thermophi... [more]
PGK_STRT14.214e-1859.26Phosphoglycerate kinase OS=Streptococcus thermophi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001H05_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181765 ID=CN181765; Name=CN181765; organism=Citrus sinensis; type=EST; length=541bp
ATTCTGATTATCTAACATCATCAACGGCTCATTGTGATCAGAAAGGAACT
AGAACTTGACTTCAGGAAACTTATAGCCTTACCATCACAATGTTCCAAAA
TGGGATCAAATCCAGAAAAATGCATCACCATTGATGCCTGTGAGAAAGAA
TTTATTTTTACTCTTACAGCATCTACAAAACCAACTCTAATGATAAAGTT
TAACTTTTATCCACTCTGGGCTGACAACCAGCCACACATACAACTCTGGA
AATGGCACATTTAAAAAAGGAAAGTCCAGGAACTGGGTTTAAGCATCATC
AAGAGCAAGCACACCAGGGAGTGTTTTGCCCTCAAGGAGCTCTAAGCTGG
CTCCACCTCCAGTGGAGATATGGCTCATCTTGTCAGCCAGACCAACCTTC
TCTACGGCTGCAACTGAGTCACCTCCTCCAATGATTGTGGTCACTCCCTT
CCCGCTGAGCTCCGCAAGCTTCTTGGCAATTGCCTCAGTGCCAGCAGCAA
ATTTATCAAATTCAAACACACCCATAGGTCCATTCCAGCCT
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