CN181765

Overview
NameCN181765
Unique NameCN181765
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length541
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_SALSV (Phosphoglycerate kinase OS=Salmonella schwarzengrund (strain CVM19633) GN=pgk PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.187e-18
Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = -2 
Query:  295 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 537
            WNGP+GVFEF  F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  306 WNGPVGVFEFPNFRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383
[Close]
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_SALPK (Phosphoglycerate kinase OS=Salmonella paratyphi A (strain AKU_12601) GN=pgk PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.187e-18
Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = -2 
Query:  295 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 537
            WNGP+GVFEF  F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  306 WNGPVGVFEFPNFRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383
[Close]
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_SALPB (Phosphoglycerate kinase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=pgk PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.187e-18
Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = -2 
Query:  295 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 537
            WNGP+GVFEF  F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  306 WNGPVGVFEFPNFRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383
[Close]
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_SALPA (Phosphoglycerate kinase OS=Salmonella paratyphi A GN=pgk PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.187e-18
Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = -2 
Query:  295 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 537
            WNGP+GVFEF  F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  306 WNGPVGVFEFPNFRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383
[Close]
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_SALNS (Phosphoglycerate kinase OS=Salmonella newport (strain SL254) GN=pgk PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.187e-18
Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = -2 
Query:  295 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 537
            WNGP+GVFEF  F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  306 WNGPVGVFEFPNFRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383
[Close]
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_SALHS (Phosphoglycerate kinase OS=Salmonella heidelberg (strain SL476) GN=pgk PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.187e-18
Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = -2 
Query:  295 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 537
            WNGP+GVFEF  F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  306 WNGPVGVFEFPNFRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383
[Close]
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_SALG2 (Phosphoglycerate kinase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=pgk PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.187e-18
Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = -2 
Query:  295 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 537
            WNGP+GVFEF  F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  306 WNGPVGVFEFPNFRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383
[Close]
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_SALEP (Phosphoglycerate kinase OS=Salmonella enteritidis PT4 (strain P125109) GN=pgk PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.187e-18
Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = -2 
Query:  295 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 537
            WNGP+GVFEF  F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  306 WNGPVGVFEFPNFRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383
[Close]
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_SALDC (Phosphoglycerate kinase OS=Salmonella dublin (strain CT_02021853) GN=pgk PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.187e-18
Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = -2 
Query:  295 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 537
            WNGP+GVFEF  F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  306 WNGPVGVFEFPNFRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383
[Close]
BLAST of CN181765 vs. ExPASy Swiss-Prot
Match: PGK_SALCH (Phosphoglycerate kinase OS=Salmonella choleraesuis GN=pgk PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.187e-18
Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = -2 
Query:  295 WNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 537
            WNGP+GVFEF  F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  306 WNGPVGVFEFPNFRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383
The following BLAST results are available for this feature:
BLAST of CN181765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_SALSV7.187e-1853.09Phosphoglycerate kinase OS=Salmonella schwarzengru... [more]
PGK_SALPK7.187e-1853.09Phosphoglycerate kinase OS=Salmonella paratyphi A ... [more]
PGK_SALPB7.187e-1853.09Phosphoglycerate kinase OS=Salmonella paratyphi B ... [more]
PGK_SALPA7.187e-1853.09Phosphoglycerate kinase OS=Salmonella paratyphi A ... [more]
PGK_SALNS7.187e-1853.09Phosphoglycerate kinase OS=Salmonella newport (str... [more]
PGK_SALHS7.187e-1853.09Phosphoglycerate kinase OS=Salmonella heidelberg (... [more]
PGK_SALG27.187e-1853.09Phosphoglycerate kinase OS=Salmonella gallinarum (... [more]
PGK_SALEP7.187e-1853.09Phosphoglycerate kinase OS=Salmonella enteritidis ... [more]
PGK_SALDC7.187e-1853.09Phosphoglycerate kinase OS=Salmonella dublin (stra... [more]
PGK_SALCH7.187e-1853.09Phosphoglycerate kinase OS=Salmonella choleraesuis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001H05_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181765 ID=CN181765; Name=CN181765; organism=Citrus sinensis; type=EST; length=541bp
ATTCTGATTATCTAACATCATCAACGGCTCATTGTGATCAGAAAGGAACT
AGAACTTGACTTCAGGAAACTTATAGCCTTACCATCACAATGTTCCAAAA
TGGGATCAAATCCAGAAAAATGCATCACCATTGATGCCTGTGAGAAAGAA
TTTATTTTTACTCTTACAGCATCTACAAAACCAACTCTAATGATAAAGTT
TAACTTTTATCCACTCTGGGCTGACAACCAGCCACACATACAACTCTGGA
AATGGCACATTTAAAAAAGGAAAGTCCAGGAACTGGGTTTAAGCATCATC
AAGAGCAAGCACACCAGGGAGTGTTTTGCCCTCAAGGAGCTCTAAGCTGG
CTCCACCTCCAGTGGAGATATGGCTCATCTTGTCAGCCAGACCAACCTTC
TCTACGGCTGCAACTGAGTCACCTCCTCCAATGATTGTGGTCACTCCCTT
CCCGCTGAGCTCCGCAAGCTTCTTGGCAATTGCCTCAGTGCCAGCAGCAA
ATTTATCAAATTCAAACACACCCATAGGTCCATTCCAGCCT
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