CN181764

Overview
NameCN181764
Unique NameCN181764
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length597
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11791 contig Csv1_Contig11791:10..606. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2)

HSP 1 Score: 208.764 bits (530), Expect = 1.716e-53
Identity = 98/205 (47.80%), Postives = 131/205 (63.90%), Query Frame = 2
Query:   23 VILCVGFLSLVSSVQGYG---GWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC--ANDPQWCLRGSII-VTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNWQ 595
            ++     +  V +  G+    GW    ATFY              YGNLY+ GYGTNTAALS+ LFN+G SCG C+ IMC  A  PQWC  G+ + +TATN CPP        GGWC+PP  HFD+++P +  I  Y+AGI+PV+Y++V+C R GGIRFT+ G ++F LVL++NV G+G VR+VS+KG  T W  ++RNWG NWQ
Sbjct:    5 ILFATSLVITVLAASGFAPAHGWNKGTATFYGGADASGTMGGACGYGNLYTAGYGTNTAALSSVLFNDGWSCGQCYLIMCDAAATPQWCRAGAAVTITATNLCPPNWALPSNSGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQGGIRFTMGGFNFFELVLVSNVAGSGSVRSVSVKGGSTGWITLNRNWGANWQ 209          
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 2.241e-53
Identity = 100/181 (55.25%), Postives = 121/181 (66.85%), Query Frame = 2
Query:   86 NAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC-ANDPQWCLRG--SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNWQ 595
            +A ATFY              YGNLY+ GYG   AALS+ALFN+G  CGAC+ I C  +  +WC  G  SI +TATN CPP        GGWC+PP  HFD+SQP +++IA Y+AGIVPV Y+RV C+R+GGIRF I GH YF LV +TNVGG+G V  +S+KGS T W  MSRNWG NWQ
Sbjct:   30 SAFATFYGGKDGSGTMGGACGYGNLYNAGYGLYNAALSSALFNDGAMCGACYTITCDTSQTKWCKPGGNSITITATNLCPPNWALPSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKRVPCQRSGGIRFAISGHDYFELVTVTNVGGSGVVAQMSIKGSNTGWMAMSRNWGANWQ 210          
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.241e-53
Identity = 101/182 (55.49%), Postives = 120/182 (65.93%), Query Frame = 2
Query:   80 WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC-ANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNWQ 595
            W  A ATFY              YGNLY+ GYG N AALS+ALFN+G  CGAC+ I C  +   WC  G SI +TATN CPP        GGWC+PP  HFD+SQP +  IA Y+AGIVPV ++RV C+++GGIRFTI G  YF LV + NVGG+G V  VS+KGS+T W  MSRNWGQNWQ
Sbjct:   23 WTPATATFYGGSDGAGTMGGACGYGNLYNAGYGLNNAALSSALFNDGAMCGACYTIACDTSQSTWCKPGTSITITATNLCPPNYAKKSDAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSGGIRFTISGRDYFELVTVFNVGGSGVVAQVSIKGSKTDWMAMSRNWGQNWQ 204          
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 3.823e-53
Identity = 100/216 (46.30%), Postives = 137/216 (63.43%), Query Frame = 2
Query:   11 MALW----------VILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCAN--DPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNWQ 595
            MA+W          +++ +   SL++      GW +  ATFY              YGNLY  GYGTNTAALS+ALFN+G SCG C+QI C +  +P+WCL+G ++ +T TN CPP        GGWC+PP  HFD+++P +  I  Y+AGIVPV+Y+RV C + GG+RFT+ G +YF LVLI+NV G+G +++V +KG  T   P+SRNWG NWQ
Sbjct:    1 MAMWKKKKTPSILPLVVVIAAASLIAPTTA--GWSSGTATFYGGSDASGTMGGACGYGNLYWSGYGTNTAALSSALFNDGASCGQCYQIACDHQAEPRWCLQGRTVTITGTNLCPPNYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQSVWVKGPNTDRMPLSRNWGANWQ 214          
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 6.521e-53
Identity = 96/189 (50.79%), Postives = 124/189 (65.61%), Query Frame = 2
Query:   62 VQGY---GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNWQ 595
            V GY   G W  AHATFY              YGNL++ GYG +TAALST LFN+G  CG CFQI C+  P      S +VTATN CPP        GGWC+PP  HFD+++P F  +A +RAGI+PV YRRV C+R+GG+RF   G+SY+ L+ + NVGGAGD++++++KGSRT W  MS NWG ++Q
Sbjct:   28 VAGYYRPGPWRYAHATFYGDETGGETMGGACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPHCYSGKSTVVTATNLCPPNWYQDSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQ 216          
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 2.478e-52
Identity = 97/182 (53.30%), Postives = 121/182 (66.48%), Query Frame = 2
Query:   77 GWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCAND--PQWCLRGSII-VTATNFCPP------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNWQ 595
            GW+   ATFY              YGNLY QGYG N AALST LFNNG SCG C+ I+C  D  P  C  G+ I VT TNFCPP      GGWC+    HFD+SQP +++I  Y AGIVP++Y++V+C R+GG+RFTI G +YF LVL+TN+ G+G + ++S+KGS T W  MSRNWG NWQ
Sbjct:   22 GWLQGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNNGASCGQCYLIICNYDKAPSGCRMGTAITVTGTNFCPPNYDLPYGGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSVKGSSTGWIQMSRNWGANWQ 203          
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 2.740e-51
Identity = 94/185 (50.81%), Postives = 118/185 (63.78%), Query Frame = 2
Query:   74 GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGS-RTRWQPMSRNWGQNWQ 595
            G W  AHATFY              Y +   +GYG  T A+ST LF  G  CGAC+++ C + P  C  G+  ++VTATN CPP        GGWC+PP  HFDLS P F  IAQ +AGIVP+ YRRV C + GGIR+TI G+ YFNLV+++NVGGAGDV  +S+KG+ R +W P+ RNWGQ WQ
Sbjct:   40 GPWKQAHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVKGNKRVKWTPLKRNWGQEWQ 224          
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 4.673e-51
Identity = 92/181 (50.83%), Postives = 121/181 (66.85%), Query Frame = 2
Query:   80 WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC--ANDPQWCLRG-SIIVTATNFCPP------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNWQ 595
            W+   ATFY              YGNLY QGYG N AALST LFN+G SCG C+ I+C  +  P WC  G +I VT TN+CPP      GGWC+    HFD+SQP +++I  Y AGI+P++Y++V+C R GG+RFTI+G +YF LVL+TN+ G+G + ++S+KGS T W  M+RNWG NWQ
Sbjct:   23 WLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGKAITVTGTNYCPPNYDLPYGGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTINGFNYFELVLVTNMAGSGSIASMSVKGSCTGWIQMTRNWGANWQ 203          
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.776e-50
Identity = 98/200 (49.00%), Postives = 128/200 (64.00%), Query Frame = 2
Query:   20 WVILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC--ANDPQWCLRGSII-VTATNFCPPG---GWCDPPNHHFDLSQPVFQHIAQY-RAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTR-WQPMSRNWGQNWQ 595
            +++  +  +S +S      GWI AHAT+Y              Y N Y  G+G +TAALS  LF +G SCG C+Q+ C    DP+WCLRG+ + VTATNFCP     GWC+ P HHFD+S P F  IA+    GIVPV YRRV CKR GG+RFT+ G   FN+V+I+NVGG G VR+V+++GS+ + W  M+RNWG NWQ
Sbjct:    7 YLVTVILLVSTLSVGMCSNGWIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRGAAVTVTATNFCPTNNNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQ 206          
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.029e-50
Identity = 99/204 (48.53%), Postives = 127/204 (62.25%), Query Frame = 2
Query:   32 CVGFLSLVS----SVQGYGG--WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNWQ 595
            C+  LS+++    S+  Y G  W  A ATFY              YGN+Y  GYG  T ALSTALFN G +CG CFQ+ C + P  C  GS   +VTATN CPP        GGWC+PP  HFDL++P F  IA ++AGI+PV YRRV CK+ GGIRF  +G+ Y+ LV + NVGG GD++ +++KGSRT W  MS NWG ++Q
Sbjct:    9 CLVILSMMAMIGTSMATYAGTPWRTASATFYGDDTGSATMGGACGYGNMYDSGYGVATTALSTALFNEGYACGQCFQLKCVSSPN-CYYGSPATVVTATNICPPNYGQASNNGGWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVKGSRTGWINMSHNWGASYQ 211          
The following BLAST results are available for this feature:
BLAST of CN181764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
EXP25_ORYSJ1.716e-5347.80Expansin-A25 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA3_ORYSJ2.241e-5355.25Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP33_ORYSJ2.241e-5355.49Expansin-A33 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP15_ORYSJ3.823e-5346.30Expansin-A15 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA7_ARATH6.521e-5350.79Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 ... [more]
EXP18_ORYSJ2.478e-5253.30Expansin-A18 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP32_ORYSJ2.740e-5150.81Expansin-A32 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP19_ORYSJ4.673e-5150.83Expansin-A19 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP12_ARATH1.776e-5049.00Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=... [more]
EXP18_ARATH3.029e-5048.53Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001H04_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181764 ID=CN181764; Name=CN181764; organism=Citrus sinensis; type=EST; length=597bp
GAGGAAAAAAATGGCTCTTTGGGTGATTCTTTGTGTTGGGTTTCTCTCAT
TGGTCTCATCCGTTCAAGGTTATGGAGGTTGGATTAATGCTCATGCAACT
TTCTATGGAGGTGGTGATGCTTCTGGCACAATGGGGGGCGCTTGTGGGTA
CGGCAATTTGTACAGCCAAGGTTATGGTACTAATACCGCAGCACTTAGCA
CTGCTTTGTTCAACAATGGCCTAAGTTGTGGAGCTTGCTTTCAAATTATG
TGCGCTAATGACCCGCAATGGTGCCTGCGTGGCTCCATCATTGTCACTGC
CACTAACTTTTGCCCTCCTGGAGGCTGGTGTGATCCTCCTAACCACCACT
TTGATCTCTCTCAGCCTGTCTTCCAACACATTGCCCAGTATAGAGCTGGT
ATTGTTCCTGTAATCTACAGAAGGGTGAGATGCAAGAGAAATGGGGGCAT
AAGGTTCACAATCGATGGCCATTCTTACTTCAATTTAGTTCTAATAACAA
ACGTGGGTGGAGCTGGTGACGTGCGTGCTGTATCCCTCAAAGGTTCAAGG
ACTAGATGGCAACCGATGTCCAGAAACTGGGGCCAAAACTGGCAAAG
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