CN181764
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 208.764 bits (530), Expect = 1.716e-53 Identity = 98/205 (47.80%), Postives = 131/205 (63.90%), Query Frame = 2 Query: 23 VILCVGFLSLVSSVQGYG---GWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC--ANDPQWCLRGSII-VTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNWQ 595 ++ + V + G+ GW ATFY YGNLY+ GYGTNTAALS+ LFN+G SCG C+ IMC A PQWC G+ + +TATN CPP GGWC+PP HFD+++P + I Y+AGI+PV+Y++V+C R GGIRFT+ G ++F LVL++NV G+G VR+VS+KG T W ++RNWG NWQ Sbjct: 5 ILFATSLVITVLAASGFAPAHGWNKGTATFYGGADASGTMGGACGYGNLYTAGYGTNTAALSSVLFNDGWSCGQCYLIMCDAAATPQWCRAGAAVTITATNLCPPNWALPSNSGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQGGIRFTMGGFNFFELVLVSNVAGSGSVRSVSVKGGSTGWITLNRNWGANWQ 209
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 208.379 bits (529), Expect = 2.241e-53 Identity = 100/181 (55.25%), Postives = 121/181 (66.85%), Query Frame = 2 Query: 86 NAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC-ANDPQWCLRG--SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNWQ 595 +A ATFY YGNLY+ GYG AALS+ALFN+G CGAC+ I C + +WC G SI +TATN CPP GGWC+PP HFD+SQP +++IA Y+AGIVPV Y+RV C+R+GGIRF I GH YF LV +TNVGG+G V +S+KGS T W MSRNWG NWQ Sbjct: 30 SAFATFYGGKDGSGTMGGACGYGNLYNAGYGLYNAALSSALFNDGAMCGACYTITCDTSQTKWCKPGGNSITITATNLCPPNWALPSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKRVPCQRSGGIRFAISGHDYFELVTVTNVGGSGVVAQMSIKGSNTGWMAMSRNWGANWQ 210
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 2.241e-53 Identity = 101/182 (55.49%), Postives = 120/182 (65.93%), Query Frame = 2 Query: 80 WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC-ANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNWQ 595 W A ATFY YGNLY+ GYG N AALS+ALFN+G CGAC+ I C + WC G SI +TATN CPP GGWC+PP HFD+SQP + IA Y+AGIVPV ++RV C+++GGIRFTI G YF LV + NVGG+G V VS+KGS+T W MSRNWGQNWQ Sbjct: 23 WTPATATFYGGSDGAGTMGGACGYGNLYNAGYGLNNAALSSALFNDGAMCGACYTIACDTSQSTWCKPGTSITITATNLCPPNYAKKSDAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSGGIRFTISGRDYFELVTVFNVGGSGVVAQVSIKGSKTDWMAMSRNWGQNWQ 204
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 207.608 bits (527), Expect = 3.823e-53 Identity = 100/216 (46.30%), Postives = 137/216 (63.43%), Query Frame = 2 Query: 11 MALW----------VILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCAN--DPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNWQ 595 MA+W +++ + SL++ GW + ATFY YGNLY GYGTNTAALS+ALFN+G SCG C+QI C + +P+WCL+G ++ +T TN CPP GGWC+PP HFD+++P + I Y+AGIVPV+Y+RV C + GG+RFT+ G +YF LVLI+NV G+G +++V +KG T P+SRNWG NWQ Sbjct: 1 MAMWKKKKTPSILPLVVVIAAASLIAPTTA--GWSSGTATFYGGSDASGTMGGACGYGNLYWSGYGTNTAALSSALFNDGASCGQCYQIACDHQAEPRWCLQGRTVTITGTNLCPPNYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQSVWVKGPNTDRMPLSRNWGANWQ 214
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 6.521e-53 Identity = 96/189 (50.79%), Postives = 124/189 (65.61%), Query Frame = 2 Query: 62 VQGY---GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNWQ 595 V GY G W AHATFY YGNL++ GYG +TAALST LFN+G CG CFQI C+ P S +VTATN CPP GGWC+PP HFD+++P F +A +RAGI+PV YRRV C+R+GG+RF G+SY+ L+ + NVGGAGD++++++KGSRT W MS NWG ++Q Sbjct: 28 VAGYYRPGPWRYAHATFYGDETGGETMGGACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPHCYSGKSTVVTATNLCPPNWYQDSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQ 216
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 204.912 bits (520), Expect = 2.478e-52 Identity = 97/182 (53.30%), Postives = 121/182 (66.48%), Query Frame = 2 Query: 77 GWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCAND--PQWCLRGSII-VTATNFCPP------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNWQ 595 GW+ ATFY YGNLY QGYG N AALST LFNNG SCG C+ I+C D P C G+ I VT TNFCPP GGWC+ HFD+SQP +++I Y AGIVP++Y++V+C R+GG+RFTI G +YF LVL+TN+ G+G + ++S+KGS T W MSRNWG NWQ Sbjct: 22 GWLQGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNNGASCGQCYLIICNYDKAPSGCRMGTAITVTGTNFCPPNYDLPYGGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSVKGSSTGWIQMSRNWGANWQ 203
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 2.740e-51 Identity = 94/185 (50.81%), Postives = 118/185 (63.78%), Query Frame = 2 Query: 74 GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGS-RTRWQPMSRNWGQNWQ 595 G W AHATFY Y + +GYG T A+ST LF G CGAC+++ C + P C G+ ++VTATN CPP GGWC+PP HFDLS P F IAQ +AGIVP+ YRRV C + GGIR+TI G+ YFNLV+++NVGGAGDV +S+KG+ R +W P+ RNWGQ WQ Sbjct: 40 GPWKQAHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVKGNKRVKWTPLKRNWGQEWQ 224
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 4.673e-51 Identity = 92/181 (50.83%), Postives = 121/181 (66.85%), Query Frame = 2 Query: 80 WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC--ANDPQWCLRG-SIIVTATNFCPP------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNWQ 595 W+ ATFY YGNLY QGYG N AALST LFN+G SCG C+ I+C + P WC G +I VT TN+CPP GGWC+ HFD+SQP +++I Y AGI+P++Y++V+C R GG+RFTI+G +YF LVL+TN+ G+G + ++S+KGS T W M+RNWG NWQ Sbjct: 23 WLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGKAITVTGTNYCPPNYDLPYGGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTINGFNYFELVLVTNMAGSGSIASMSVKGSCTGWIQMTRNWGANWQ 203
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 1.776e-50 Identity = 98/200 (49.00%), Postives = 128/200 (64.00%), Query Frame = 2 Query: 20 WVILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC--ANDPQWCLRGSII-VTATNFCPPG---GWCDPPNHHFDLSQPVFQHIAQY-RAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTR-WQPMSRNWGQNWQ 595 +++ + +S +S GWI AHAT+Y Y N Y G+G +TAALS LF +G SCG C+Q+ C DP+WCLRG+ + VTATNFCP GWC+ P HHFD+S P F IA+ GIVPV YRRV CKR GG+RFT+ G FN+V+I+NVGG G VR+V+++GS+ + W M+RNWG NWQ Sbjct: 7 YLVTVILLVSTLSVGMCSNGWIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRGAAVTVTATNFCPTNNNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQ 206
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.029e-50 Identity = 99/204 (48.53%), Postives = 127/204 (62.25%), Query Frame = 2 Query: 32 CVGFLSLVS----SVQGYGG--WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNWQ 595 C+ LS+++ S+ Y G W A ATFY YGN+Y GYG T ALSTALFN G +CG CFQ+ C + P C GS +VTATN CPP GGWC+PP HFDL++P F IA ++AGI+PV YRRV CK+ GGIRF +G+ Y+ LV + NVGG GD++ +++KGSRT W MS NWG ++Q Sbjct: 9 CLVILSMMAMIGTSMATYAGTPWRTASATFYGDDTGSATMGGACGYGNMYDSGYGVATTALSTALFNEGYACGQCFQLKCVSSPN-CYYGSPATVVTATNICPPNYGQASNNGGWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVKGSRTGWINMSHNWGASYQ 211 The following BLAST results are available for this feature:
BLAST of CN181764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181764 ID=CN181764; Name=CN181764; organism=Citrus sinensis; type=EST; length=597bpback to top |