CN181764
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 191.43 bits (485), Expect = 2.835e-48 Identity = 100/201 (49.75%), Postives = 126/201 (62.69%), Query Frame = 2 Query: 11 MALW-VILCVGFLSLVSSVQGYGG----WINAHATFYXXXXXXXXXXXXXX-YGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGG-WCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNW 592 MA W + + + V++ G G W +A A +Y YG+L GYG TAALSTALFN+G SCGAC++IMC+ +PQ CL GSI +TAT+ CPPG WC PN HFDLS P+F IAQ +A +VPV YRRV C + GG++F + G+ +L NVGGAGD+ AVS KGS+T W MSR WGQNW Sbjct: 17 MATWFMFISYSHGANVAAAPGTNGLDTAWYDARAAYYGDIHGGGTELEGACGYGDLNKHGYGLATAALSTALFNSGASCGACYEIMCSPNPQGCLSGSIKITATDLCPPGSAWCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRRVPCAKTGGVKFEVKGNPNILTILPYNVGGAGDIIAVSAKGSKTAWVVMSRYWGQNW 217
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 187.193 bits (474), Expect = 5.347e-47 Identity = 90/180 (50.00%), Postives = 111/180 (61.67%), Query Frame = 2 Query: 80 WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNW 592 W A AT+Y YG+L GYG T LS LF G CGACF++ C +D +WC+ G SII+TATNFC P GG C+PPN HF L F+ IA ++AG +PV YRR+ C++ G +RFT+DG F VLITNV G+GD+ AV +KGSRT W PM RNWGQNW Sbjct: 40 WRPARATYYAATNPRDAVGGACGYGDLVKSGYGMATVGLSETLFERGQICGACFELRCVDDLRWCIPGTSIILTATNFCAPNYGFDPDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRINCRKEGSMRFTVDGGGIFISVLITNVAGSGDIAAVKIKGSRTGWLPMGRNWGQNW 219
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 4.527e-46 Identity = 87/175 (49.71%), Postives = 115/175 (65.71%), Query Frame = 2 Query: 80 WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC--ANDPQWCLRG-SIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNWQ 595 W+ ATFY YGNLY Q YG N AALST LFN+G SCG C+ I+C P WC G +I VT TN+ GGWC+ +FD+SQP +++I Y AGIVP++Y++V+C R GG+RF I+G +YF LVL+TN+ G+G + ++S+KGS T W M+RNWG NWQ Sbjct: 23 WLPGTATFYGGADGSGTMGGACGYGNLYDQRYGINNAALSTPLFNDGASCGQCYLIICDYGKAPDWCKLGKAITVTGTNY---GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQVKCWRYGGVRFIINGFNYFELVLVTNMAGSGSIVSMSVKGSCTGWIQMTRNWGANWQ 194
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 7.721e-46 Identity = 93/185 (50.27%), Postives = 112/185 (60.54%), Query Frame = 2 Query: 80 WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP----------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLK-GSRTRWQPMSRNWGQNWQ 595 W AHATFY YGNLY+ GYGT+TAALST LF +G CG C+Q+ C C RGS I VTATN CPP GGWC+PP HFDLS+P F +A +RAGIVPV+YRRV C R GG+RF + G+ Y+ L + NV GAGDV + +K G W MS NWG ++Q Sbjct: 37 WTPAHATFYGDETASETMGGACGYGNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCVGTAS-CYRGSPAITVTATNLCPPNWAEDPDRGGGGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVKAGGGGGWVRMSHNWGASYQ 220
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 180.259 bits (456), Expect = 6.536e-45 Identity = 87/180 (48.33%), Postives = 116/180 (64.44%), Query Frame = 2 Query: 80 WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNW 592 W +A A++Y +G+L GYG T LSTALF G +CG C+++ C +D ++CL G SI+VTATNFC P GG C+PPNHHF L F+ IA ++AG++P+ YRRV C R+GG+RF + G S+F VLI+NVGGAGDVR+V +KG+ + W M RNWGQ W Sbjct: 33 WRSAKASYYAADPEDAIGGACG-FGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVDDLKYCLPGTSIVVTATNFCAPNFGLPADAGGVCNPPNHHFLLPIQSFEKIALWKAGVMPIQYRRVNCLRDGGVRFAVAGRSFFLTVLISNVGGAGDVRSVKIKGTESGWLSMGRNWGQIW 211
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 6.118e-43 Identity = 84/159 (52.83%), Postives = 105/159 (66.04%), Query Frame = 2 Query: 149 YGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNWQ 595 YG+L YG TA +S ALF G +CG C+++ C N WCLRGS ++VTAT+FC P GGWC+ P HF++S+ F +A+ +A IVPV +RRV C R GG+RFTI G + F VLITNV G+V AV +KGSRT W PM RNWGQNWQ Sbjct: 57 YGDLDIFRYGRYTAGVSGALFGRGSACGGCYEVRCVNHVLWCLRGSPTVVVTATDFCAPNLGLSDDYGGWCNFPKEHFEMSEAAFLRVAKAKADIVPVQFRRVSCDRAGGMRFTITGGASFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQ 215
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.154e-41 Identity = 79/158 (50.00%), Postives = 104/158 (65.82%), Query Frame = 2 Query: 149 YGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNW 592 YG+L + +A LS LFN G SCGAC ++ C N +WCL+GS ++VTAT+FCPP GGWC+ P H +LS F IA+ RA ++P+ YRRV+C R GG+RF++ G S+F VLI+NVG G+V V +KG T W PM+RNWGQNW Sbjct: 53 YGDLRQSSFAGYSAGLSGKLFNRGSSCGACLEVRCVNHIRWCLQGSPSVVVTATDFCPPNSGLSSDYGGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRRVKCGRRGGLRFSLSGSSHFFQVLISNVGLDGEVVGVKVKGHTTAWIPMARNWGQNW 210
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 1.320e-37 Identity = 75/153 (49.02%), Postives = 98/153 (64.05%), Query Frame = 2 Query: 173 YGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLK--GSRTRWQPMSRNWGQNWQ 595 Y T TAALST LF +G CG C+++ C P WC GS +++T TN CPP GGWC+PP HHFD++ P F +AQ AGIVPV YRRV C+R GG+RF + G+ Y+ L+ + NVGGAGDV ++S+K G W + NWG +Q Sbjct: 85 YSTKTAALSTPLFADGNGCGQCYELRCVKSP-WCNPGSPSVVITGTNLCPPNWYLPNDDGGWCNPPRHHFDMAPPSFLKLAQRVAGIVPVQYRRVPCQRTGGVRFCLQGNHYWLLLYVMNVGGAGDVSSLSVKTSGGGGAWIQAAHNWGITYQ 236
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.366e-34 Identity = 76/179 (42.46%), Postives = 108/179 (60.34%), Query Frame = 2 Query: 74 GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPN----HHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGS-RTRWQPMSRNWGQNWQ 595 G W++ HATFY G + GYG TAA+S ALF+NG CGAC+++ + +++VTATN PP P N HFDL+ P F IA+ + G+VPV YR+V C R GGI++TI G+ +N+V++ NVGGAGDV +++KG+ R +W P+ R+WGQ W+ Sbjct: 80 GPWVDGHATFYGGRDASGTTEGGAC-GYKDADGYGAMTAAVSPALFDNGAGCGACYELKGDSGK------TVVVTATNQAPP-----PVNGMKGEHFDLTMPAFLSIAEEKLGVVPVSYRKVACVRQGGIKYTITGNPSYNMVMVKNVGGAGDVVKLTVKGTKRVKWTPLQRSWGQLWK 246
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXB14_ORYSJ (Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.162e-17 Identity = 67/214 (31.31%), Postives = 98/214 (45.79%), Query Frame = 2 Query: 11 MALWVILCVGFLSLVSSVQGY---GGWINAHATFYXXXXXXXXXXXXXXY-GNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNG-GIRFTIDGHS--YFNLVLITNVGGAGDVRAVSL-----KGSRTRWQPMSRNWGQNWQ 595 +A + C S V+SV + GW AT+Y Y G++ + + AA S +++ +G CG+C+Q+ C+ +P C + V T+ C PGG C HFDLS F +A+ AG +PV Y RV CK G I F +D S Y+ VL+ + G GD+ AV L G W M ++WG W+ Sbjct: 12 VAFVALACCVLRSSVASVDHHRKLSGWSIGGATWYGPANGSGTDGGACGYQGDVGQPPFNSMIAAGSPSIYESGKGCGSCYQVKCSGNPS-CSGKPVTVVLTDLC-PGGACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYARVPCKWQGVDIAFRVDAGSNQYYLAVLVEDEDGDGDLSAVDLMQSGGSGGGGSWAAMQQSWGAVWK 223 The following BLAST results are available for this feature:
BLAST of CN181764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181764 ID=CN181764; Name=CN181764; organism=Citrus sinensis; type=EST; length=597bpback to top |