CN181763

Overview
NameCN181763
Unique NameCN181763
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH7_RAT (Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus GN=Adh7 PE=1 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.044e-33
Identity = 74/185 (40.00%), Postives = 104/185 (56.22%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 562
            ++ CKAAV W   +P  I+D+EVAPP+A EVR+KI  T +C TD +  +        P I GH                     V+P+F  +C +C  CR+   N+C  +R +     +LADG +RF+  G+PV HF+ TSTF+EYTV+    VAKI+  AP +K C++ CG STG GA +  AK
Sbjct:    7 VIKCKAAVLWGTNQPFSIEDIEVAPPKAKEVRVKILATGICGTDDHVIKGT-MVSKFPVIVGHEAVGIVESVGEEVTTVRPGDKVIPLFLPQCRECNPCRNPEGNLC--IRSDLTGRGVLADGTTRFTCKGKPVQHFMNTSTFTEYTVLDESSVAKIDAEAPPEKACLIGCGFSTGYGAAVKTAK 188          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH7_MOUSE (Alcohol dehydrogenase class 4 mu/sigma chain OS=Mus musculus GN=Adh7 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.326e-33
Identity = 72/185 (38.92%), Postives = 104/185 (56.22%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 562
            ++ CKAAV W   +P  I+++EVAPP+A EVR+KI  T +CRTD +  +        P I GH                     V+P+F  +C +C  C +   N+C  +R +     +LADG +RF+  G+PV HF+ TSTF+EYTV+    VAK++  AP +K C++ CG STG GA +  AK
Sbjct:    7 VIKCKAAVLWGVNQPFSIEEIEVAPPKAKEVRVKILATGICRTDDHIIKGS-MVSKFPVIVGHEAVGVVESVGEGVTTVRPGDKVIPLFLPQCRECNACLNPEGNLC--IRSDLTGCGVLADGTTRFTCKGKPVQHFMNTSTFTEYTVLDESSVAKVDGAAPPEKACLIGCGFSTGYGAAVKTAK 188          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH8_RANPE (NADP-dependent alcohol dehydrogenase OS=Rana perezi GN=ADH8 PE=1 SV=3)

HSP 1 Score: 141.354 bits (355), Expect = 3.967e-33
Identity = 78/184 (42.39%), Postives = 107/184 (58.15%), Query Frame = 2
Query:   11 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 562
            +TCKAAVAWE  KPL ++ + VAPP+A EVRIKI  + +C +D    +    +   P I GH                     V+P+F  +CG CR C+S  SN C+   +    G+M AD  SRF+  G+P+ + +GTSTF+EYTVV    VAKI+P APL+  C++ CG +TG GA +N AK
Sbjct:    8 ITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSK-FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLM-ADMTSRFTCRGKPIYNLVGTSTFTEYTVVADIAVAKIDPKAPLES-CLIGCGFATGYGAAVNTAK 188          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: FRMA_HAEIN (S-(hydroxymethyl)glutathione dehydrogenase OS=Haemophilus influenzae GN=frmA PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 5.728e-32
Identity = 70/181 (38.67%), Postives = 104/181 (57.46%), Query Frame = 2
Query:   20 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 562
            +AAVA+   +PL I +++V  P+  EV I+  +T +C TD +         + P + GH                    HV+P++T ECG+C  CRS  +N+C  +R    +G+M  D  +RFS  G+P+ H++G STFSEY+VV    +AKINP A  ++VC+L CGV+TG+GA  N AK
Sbjct:   13 RAAVAFAPNQPLQIVEIDVEMPRKGEVLIRNTHTGVCHTDAFTLSGSDPEGVFPVVLGHEGAGVVVAVGEGVLSVKPGDHVIPLYTAECGECEFCRSGKTNLCVSVRDTQGKGLM-PDCTTRFSYQGQPIYHYMGCSTFSEYSVVAEVSLAKINPEANHEQVCLLGCGVTTGIGAVHNTAK 192          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH4_MOUSE (Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE=1 SV=3)

HSP 1 Score: 137.502 bits (345), Expect = 5.728e-32
Identity = 68/188 (36.17%), Postives = 108/188 (57.45%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLR---INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 562
            ++ CKAA+AW+ G PL I+++EV+PP+A EVRI++  T +C TD+   + K +  L P + GH                     V+P F  +C  C+ C S ++N+C  LR      +   ++ D  SRF+  G  + HF+G S+FS+YTVV    +A+++  A L++VC++ CG S+G GA +N AK
Sbjct:    7 VIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKA-LFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAK 193          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHL2_ARATH (Alcohol dehydrogenase-like 2 OS=Arabidopsis thaliana GN=At1g22440 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 9.771e-32
Identity = 77/188 (40.96%), Postives = 103/188 (54.79%), Query Frame = 2
Query:   11 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE-SKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRF-SINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            + CKAA+  +AG+PL+I++++V PPQA EVRIKI  TSLC TD+ FW+   G     PRI GH                     VLPVF  +C +C+ C S  SN C     + +         SRF    GE ++HF+  S+F+EYTVV    + KI+P  P+D   +LSC V+TGLGA   VA  E
Sbjct:   12 IRCKAAILRKAGEPLVIEEIQVDPPQAYEVRIKILCTSLCHTDVTFWKLDSGPLARFPRILGHEAVGVVESIGEKVDGFKQGDVVLPVFHPQCEECKECISPKSNWCTKYTNDYLSNTRRYGMTSRFKDSRGEDIHHFIFVSSFTEYTVVDIAHLVKISPEIPVDIAALLSCSVATGLGAAWKVADVE 199          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHL5_ARATH (Alcohol dehydrogenase-like 5 OS=Arabidopsis thaliana GN=At4g22110 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.177e-31
Identity = 80/189 (42.33%), Postives = 103/189 (54.50%), Query Frame = 2
Query:   11 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE-SKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSIN-GEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 571
            + CKAAV+ + G+ L+I+++ V PPQA EVRIKI  TSLC TD+ F +   G     PRI GH                     VLPVF   C +CR C+S  SN C     + +         SRF  + GE + HFL  S+FSEYTVV    + KI+P  P+DK  +LSCGVSTG+GA   VA  E+
Sbjct:   15 IRCKAAVSRKPGEALVIEEIHVDPPQAYEVRIKIICTSLCHTDVSFSKIDSGPLARFPRILGHEAVGVIESIGEHVNGFQQGDVVLPVFHPHCEECRDCKSSKSNWCARFADDFLSNTRRYGMTSRFKDSFGEDIYHFLFVSSFSEYTVVDIAHLVKISPDIPVDKAALLSCGVSTGIGAAWKVANVEK 203          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH6_RAT (Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Adh6 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.177e-31
Identity = 67/185 (36.22%), Postives = 107/185 (57.84%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 562
            ++ CKA V W+ G PL I+++EVAPP+A EVRIK+  T +C TD+   +++  +   P I GH                     V+ +   +CG+C+ C +  +N+C  +R++     + ++G SR +  G+ V+ ++   +FSEYTV+    VAKI+  APL+KVCI+ CG +TG GA +N AK
Sbjct:    7 VIRCKATVLWKPGAPLAIEEIEVAPPKAKEVRIKMVATGVCGTDIKHLDTQELSKFCPMIMGHEGVGIVESVGEGVSSVRTGDKVILLCIPQCGECKTCLNSKNNICTEIRLSKTH--LASEGTSRITCKGKLVHQYIALGSFSEYTVLKEISVAKIDEGAPLEKVCIIGCGFATGYGAAINSAK 189          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH4_RAT (Alcohol dehydrogenase 4 OS=Rattus norvegicus GN=Adh4 PE=2 SV=3)

HSP 1 Score: 133.265 bits (334), Expect = 1.080e-30
Identity = 67/188 (35.64%), Postives = 106/188 (56.38%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLR---INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 562
            ++TCKAA+AW+   PL I+++EV+PP+A EVRIK+  T +C TD+     K +  L P + GH                     V+P F  +C  C+ C S ++N+C  LR      +   ++ D  SRF+     + HF+G S+FS+YTVV    +A+++  A L++VC++ CG ++G GA +N AK
Sbjct:    7 VITCKAAIAWKTDSPLCIEEIEVSPPKAHEVRIKVIATCVCPTDINATNPKKKA-LFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKKCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTSKERSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFTSGYGAAINTAK 193          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH6_PERMA (Alcohol dehydrogenase 6 OS=Peromyscus maniculatus GN=ADH6 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.928e-29
Identity = 62/185 (33.51%), Postives = 101/185 (54.59%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 562
            ++ CKAAV W+ G PL +++++VAPP+  EVR+K+    +C TD+   ++K   P  P I GH                     V+ +   +CG+C  C +  +N+C  +R++     + ++G SR +  G+    ++ T TFSEY V+    VAK++  A L+K CI+ CG +TG GA +N AK
Sbjct:    7 VIRCKAAVLWKPGAPLTMEEIDVAPPKGKEVRVKMVAAGICGTDIKSLDNKKLAPFCPIIMGHEGTGIVESVGEGVSTVKTGDKVIILCLPQCGECNTCLNSKNNICKEVRLSGTH--LTSEGNSRITCKGKTTYQYITTGTFSEYIVIKEISVAKVDEDALLEKACIIGCGFATGFGAAINSAK 189          
The following BLAST results are available for this feature:
BLAST of CN181763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
ADH7_RAT1.044e-3340.00Alcohol dehydrogenase class 4 mu/sigma chain OS=Ra... [more]
ADH7_MOUSE2.326e-3338.92Alcohol dehydrogenase class 4 mu/sigma chain OS=Mu... [more]
ADH8_RANPE3.967e-3342.39NADP-dependent alcohol dehydrogenase OS=Rana perez... [more]
FRMA_HAEIN5.728e-3238.67S-(hydroxymethyl)glutathione dehydrogenase OS=Haem... [more]
ADH4_MOUSE5.728e-3236.17Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE... [more]
ADHL2_ARATH9.771e-3240.96Alcohol dehydrogenase-like 2 OS=Arabidopsis thalia... [more]
ADHL5_ARATH2.177e-3142.33Alcohol dehydrogenase-like 5 OS=Arabidopsis thalia... [more]
ADH6_RAT2.177e-3136.22Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Ad... [more]
ADH4_RAT1.080e-3035.64Alcohol dehydrogenase 4 OS=Rattus norvegicus GN=Ad... [more]
ADH6_PERMA5.928e-2933.51Alcohol dehydrogenase 6 OS=Peromyscus maniculatus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001H03_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181763 ID=CN181763; Name=CN181763; organism=Citrus sinensis; type=EST; length=646bp
GAGGCTTATTCTTACCTGCAAAGCGGCGGTTGCTTGGGAAGCAGGGAAGC
CGCTGATCATTCAGGATGTGGAGGTTGCTCCTCCACAGGCCATGGAAGTG
AGGATCAAGATCAAATACACCTCTCTTTGCCGCACTGATCTCTATTTCTG
GGAGTCCAAGGGTCAGACACCCTTGCTTCCTCGCATATTTGGGCATGAAG
CAGCAGGGGTTGTGGAAAGTGTTGGGGAAGGTGTTTCAGACCTTGAAGTA
GGGGATCACGTACTCCCGGTATTTACAGGGGAGTGTGGGGATTGTAGACA
CTGCAGGTCGGATGTAAGCAATATGTGTGACCTTTTGAGAATAAACCCAG
TCAGGGGAGTCATGCTTGCTGATGGACAATCTAGGTTTTCCATCAATGGG
GAGCCTGTAAATCACTTCCTTGGAACATCCACCTTTAGCGAGTACACTGT
CGTTCATTCAGGCTGCGTTGCAAAGATCAATCCTCTGGCACCTTTGGACA
AAGTCTGCATTCTCAGTTGTGGCGTCTCAACAGGGCTAGGTGCAACTCTA
AATGTGGCAAAACCTGAAAGGGGTTCGTCAGTCGCTGTCTTTGGCCTCGG
AGCTGTTGGTTTAGCAGCTGCAGAAGGTGCAAGAATTGCTGGAGCA
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