CN181763

Overview
NameCN181763
Unique NameCN181763
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHB_MYCTU (Alcohol dehydrogenase B OS=Mycobacterium tuberculosis GN=adhB PE=3 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 3.483e-21
Identity = 55/182 (30.22%), Postives = 87/182 (47.80%), Query Frame = 2
Query:   20 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL--LPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA 559
            K A+ WE  +P  ++++E+  P+  EV+I+++   +CR+D +     G  P+   P + GH                    HV+  F   CG C  C++ + N+CDL     + G  + DG  R    G+ V       TFS Y VVH   V KI+P  P +  C++ CGV+TG G+ +  A
Sbjct:    4 KGALIWEFNQPWSVEEIEIGDPRKDEVKIQMEAAGMCRSDHHL--VTGDIPMAGFPVLGGHEGAGIVTEVGPGVDDFAPGDHVVLAFIPSCGKCPSCQAGMRNLCDL-GAGLLAGESVTDGSFRIQARGQNVYPMTLLGTFSPYMVVHRSSVVKIDPSVPFEVACLVGCGVTTGYGSAVRTA 182          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHB_MYCBO (Alcohol dehydrogenase B OS=Mycobacterium bovis GN=adhB PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.483e-21
Identity = 55/182 (30.22%), Postives = 87/182 (47.80%), Query Frame = 2
Query:   20 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL--LPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA 559
            K A+ WE  +P  ++++E+  P+  EV+I+++   +CR+D +     G  P+   P + GH                    HV+  F   CG C  C++ + N+CDL     + G  + DG  R    G+ V       TFS Y VVH   V KI+P  P +  C++ CGV+TG G+ +  A
Sbjct:    4 KGALIWEFNQPWSVEEIEIGDPRKDEVKIQMEAAGMCRSDHHL--VTGDIPMAGFPVLGGHEGAGIVTEVGPGVDDFAPGDHVVLAFIPSCGKCPSCQAGMRNLCDL-GAGLLAGESVTDGSFRIQARGQNVYPMTLLGTFSPYMVVHRSSVVKIDPSVPFEVACLVGCGVTTGYGSAVRTA 182          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: FADH_AMYME (NAD/mycothiol-dependent formaldehyde dehydrogenase OS=Amycolatopsis methanolica PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 8.600e-12
Identity = 49/186 (26.34%), Postives = 74/186 (39.78%), Query Frame = 2
Query:   14 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 571
            T +  +A   G P+ + D+ +  P   EV   I   ++C TDL + E  G     P + GH                    +V+  +   CG CR C+      C     N  + + L DG          +   LG   F++ T+VH+G   K++P A      +L CGV  GLGA +N     R
Sbjct:    3 TVRGVIARSKGAPVELTDIVIPDPGPSEVTALIATCAVCHTDLTYREG-GINDEFPFLLGHEAAGTVESVGEGVDSVQPGDYVVLNWRAVCGQCRACKRGRPQYC-FSTFNATQKMTLTDGTE--------LTPALGIGAFADKTLVHAGQCTKVDPAADPAVAGLLGCGVMAGLGAAVNTGAVSR 178          
The following BLAST results are available for this feature:
BLAST of CN181763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
ADHB_MYCTU3.483e-2130.22Alcohol dehydrogenase B OS=Mycobacterium tuberculo... [more]
ADHB_MYCBO3.483e-2130.22Alcohol dehydrogenase B OS=Mycobacterium bovis GN=... [more]
FADH_AMYME8.600e-1226.34NAD/mycothiol-dependent formaldehyde dehydrogenase... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001H03_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181763 ID=CN181763; Name=CN181763; organism=Citrus sinensis; type=EST; length=646bp
GAGGCTTATTCTTACCTGCAAAGCGGCGGTTGCTTGGGAAGCAGGGAAGC
CGCTGATCATTCAGGATGTGGAGGTTGCTCCTCCACAGGCCATGGAAGTG
AGGATCAAGATCAAATACACCTCTCTTTGCCGCACTGATCTCTATTTCTG
GGAGTCCAAGGGTCAGACACCCTTGCTTCCTCGCATATTTGGGCATGAAG
CAGCAGGGGTTGTGGAAAGTGTTGGGGAAGGTGTTTCAGACCTTGAAGTA
GGGGATCACGTACTCCCGGTATTTACAGGGGAGTGTGGGGATTGTAGACA
CTGCAGGTCGGATGTAAGCAATATGTGTGACCTTTTGAGAATAAACCCAG
TCAGGGGAGTCATGCTTGCTGATGGACAATCTAGGTTTTCCATCAATGGG
GAGCCTGTAAATCACTTCCTTGGAACATCCACCTTTAGCGAGTACACTGT
CGTTCATTCAGGCTGCGTTGCAAAGATCAATCCTCTGGCACCTTTGGACA
AAGTCTGCATTCTCAGTTGTGGCGTCTCAACAGGGCTAGGTGCAACTCTA
AATGTGGCAAAACCTGAAAGGGGTTCGTCAGTCGCTGTCTTTGGCCTCGG
AGCTGTTGGTTTAGCAGCTGCAGAAGGTGCAAGAATTGCTGGAGCA
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