CN181763

Overview
NameCN181763
Unique NameCN181763
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9742 contig Csv1_Contig9742:31..676. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHL6_ARATH (Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 1.830e-54
Identity = 102/188 (54.26%), Postives = 132/188 (70.21%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 571
            ++TC AAVAW AG+PL++++VEV+PPQ +E+RIK+  TSLCR+DL  WES+    LLPRIFGH                    HVL VFTGECG CRHC S  SNMC +L +   +G+M +D ++RFSI G+PV H+   S+FSEYTVVHSGC  K++PLAPL K+C+LSCGV+ GLGA  NVA  ++
Sbjct:   13 VITCNAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAWESQS---LLPRIFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQVLGMER-KGLMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVQK 196          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSI (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.121e-54
Identity = 102/187 (54.55%), Postives = 125/187 (66.84%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            ++TCKAAVAWEA KP+ I+DV+VAPPQA EVR+KI +T+LC TD Y W  K    L P I GH                    HV+P +  EC +C+ C+S  +N+C  +R     GVM+ D +SRFSING+P+ HF+GTSTFS+YTVVH   VAKINP APLDKVC+L CGVSTGLGA  N AK E
Sbjct:    9 VITCKAAVAWEANKPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVE 195          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 6.954e-54
Identity = 101/187 (54.01%), Postives = 125/187 (66.84%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            ++TCKAAVAWEA +P+ I+DV+VAPPQA EVR+KI +T+LC TD Y W  K    L P I GH                    HV+P +  EC +C+ C+S  +N+C  +R     GVM+ D +SRFSING+P+ HF+GTSTFS+YTVVH   VAKINP APLDKVC+L CGVSTGLGA  N AK E
Sbjct:    9 VITCKAAVAWEANRPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVE 195          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHX_ARATH (Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.004e-52
Identity = 99/187 (52.94%), Postives = 124/187 (66.31%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            ++TCKAAVA+E  KPL+I+DV+VAPPQA EVRIKI YT+LC TD Y W  K    L P I GH                    HV+P +  EC +C+ C+S  +N+C  +R     G+M+ D +SRFS+NG+P+ HF+GTSTFS+YTVVH   VAKI+P APLDKVC+L CGV TGLGA  N AK E
Sbjct:    7 VITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVE 193          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHL4_ARATH (Alcohol dehydrogenase-like 4 OS=Arabidopsis thaliana GN=At1g64710 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.311e-52
Identity = 96/187 (51.34%), Postives = 132/187 (70.59%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP-LLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRF--SINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA 559
            ++TCKAAVAW AG+PL+++DV+V PPQ +EVRI+I +TS+C TDL  W+ + +     PRI GH                    HVLP+FTGECGDCR C+ D +N+C+  R++P++ VM+ DG++RF  S + +P+ HFL TSTFSEYTV+ S CV K++PL PL+K+ +LSCGVSTG+GA  NVA
Sbjct:    7 VITCKAAVAWGAGEPLVMEDVKVDPPQRLEVRIRILFTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEEMMAGDHVLPIFTGECGDCRVCKRDGANLCERFRVDPMKKVMVTDGKTRFFTSKDNKPIYHFLNTSTFSEYTVIDSACVLKVDPLFPLEKISLLSCGVSTGVGAAWNVA 193          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHX_MAIZE (Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.237e-52
Identity = 99/187 (52.94%), Postives = 124/187 (66.31%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            ++TCKAAVA+E  KPL+I+DV+VAPPQA EVR+KI +T+LC TD Y W  K    L P I GH                    HV+P +  EC +C+ C+S  +N+C  +R     GVM+ D +SRFS+NG+P+ HF+GTSTFS+YTVVH   VAKINP APLDKVC+L CGV TGLGA  N AK E
Sbjct:    9 VITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTDVQPGDHVIPCYQAECKECKFCKSGKTNLCGKVRSATGVGVMMNDMKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVPTGLGAVWNTAKVE 195          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHX_PEA (Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 8.501e-52
Identity = 100/187 (53.48%), Postives = 123/187 (65.78%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            ++TCKAAVAWE  KPL I+DVEVAPPQA EVRI+I +T+LC TD Y    K    L P I GH                    HV+P +  ECG+C+ C+S  +N+C  +R     GVM+AD +SRFS+ G+P+ HF+GTSTFS+YTVVH   VAKI+P APLDKVC+L CGV TGLGA  N AK E
Sbjct:    6 VITCKAAVAWEPNKPLTIEDVEVAPPQANEVRIQILFTALCHTDAYTLGGKDPEGLFPCILGHEAAGIVESVGEGVTDVKPGDHVIPSYQAECGECKFCKSPKTNLCGKVRAATGVGVMMADRKSRFSVKGKPIYHFMGTSTFSQYTVVHDVSVAKIHPDAPLDKVCLLGCGVPTGLGAVWNTAKVE 192          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHX_RAT (Alcohol dehydrogenase class-3 OS=Rattus norvegicus GN=Adh5 PE=1 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 4.086e-46
Identity = 91/187 (48.66%), Postives = 119/187 (63.64%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            ++ CKAAVAWEAGKPL I+++EVAPPQA EVRIKI  T++C TD Y           P I GH                     V+P++  +CG+C+ C +  +N+C  +R+   +G+M  DG SRF+  G+P+ HF+GTSTFSEYTVV    VAKI+P APLDKVC+L CG+STG GA +N AK E
Sbjct:    5 VIRCKAAVAWEAGKPLSIEEIEVAPPQAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKPILHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAAVNTAKVE 190          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHX_BOVIN (Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH5 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.459e-45
Identity = 91/187 (48.66%), Postives = 119/187 (63.64%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            ++ CKAAVAWEAGKPL I++VEVAPP+A EVRIKI  T++C TD Y           P I GH                     V+P++  +CG+C+ C +  +N+C  +R+   +G+M  DG SRF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG GA LN AK E
Sbjct:    5 VIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGNYPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAALNAAKVE 190          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHX_MOUSE (Alcohol dehydrogenase class-3 OS=Mus musculus GN=Adh5 PE=1 SV=3)

HSP 1 Score: 180.644 bits (457), Expect = 5.901e-45
Identity = 90/187 (48.13%), Postives = 118/187 (63.10%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            ++ CKAAVAWEAGKPL I+++EVAPP+A EVRIKI  T++C TD Y           P I GH                     V+P++  +CG+C+ C +  +N+C  +R+   +G+M  DG SRF+  G+ V HF+GTSTFSEYTVV    VAKI+P APLDKVC+L CG+STG GA +N AK E
Sbjct:    5 VIRCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKILATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKSVFHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAAVNTAKVE 190          
The following BLAST results are available for this feature:
BLAST of CN181763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
ADHL6_ARATH1.830e-5454.26Alcohol dehydrogenase-like 6 OS=Arabidopsis thalia... [more]
ADHX_ORYSI3.121e-5454.55Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ORYSJ6.954e-5454.01Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ARATH1.004e-5252.94Alcohol dehydrogenase class-3 OS=Arabidopsis thali... [more]
ADHL4_ARATH1.311e-5251.34Alcohol dehydrogenase-like 4 OS=Arabidopsis thalia... [more]
ADHX_MAIZE2.237e-5252.94Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH P... [more]
ADHX_PEA8.501e-5253.48Alcohol dehydrogenase class-3 OS=Pisum sativum PE=... [more]
ADHX_RAT4.086e-4648.66Alcohol dehydrogenase class-3 OS=Rattus norvegicus... [more]
ADHX_BOVIN3.459e-4548.66Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH... [more]
ADHX_MOUSE5.901e-4548.13Alcohol dehydrogenase class-3 OS=Mus musculus GN=A... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0001H03_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181763 ID=CN181763; Name=CN181763; organism=Citrus sinensis; type=EST; length=646bp
GAGGCTTATTCTTACCTGCAAAGCGGCGGTTGCTTGGGAAGCAGGGAAGC
CGCTGATCATTCAGGATGTGGAGGTTGCTCCTCCACAGGCCATGGAAGTG
AGGATCAAGATCAAATACACCTCTCTTTGCCGCACTGATCTCTATTTCTG
GGAGTCCAAGGGTCAGACACCCTTGCTTCCTCGCATATTTGGGCATGAAG
CAGCAGGGGTTGTGGAAAGTGTTGGGGAAGGTGTTTCAGACCTTGAAGTA
GGGGATCACGTACTCCCGGTATTTACAGGGGAGTGTGGGGATTGTAGACA
CTGCAGGTCGGATGTAAGCAATATGTGTGACCTTTTGAGAATAAACCCAG
TCAGGGGAGTCATGCTTGCTGATGGACAATCTAGGTTTTCCATCAATGGG
GAGCCTGTAAATCACTTCCTTGGAACATCCACCTTTAGCGAGTACACTGT
CGTTCATTCAGGCTGCGTTGCAAAGATCAATCCTCTGGCACCTTTGGACA
AAGTCTGCATTCTCAGTTGTGGCGTCTCAACAGGGCTAGGTGCAACTCTA
AATGTGGCAAAACCTGAAAGGGGTTCGTCAGTCGCTGTCTTTGGCCTCGG
AGCTGTTGGTTTAGCAGCTGCAGAAGGTGCAAGAATTGCTGGAGCA
back to top