CN181763

Overview
NameCN181763
Unique NameCN181763
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHX_HUMAN (Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4)

HSP 1 Score: 180.644 bits (457), Expect = 5.901e-45
Identity = 89/187 (47.59%), Postives = 119/187 (63.64%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            ++ CKAAVAWEAGKPL I+++EVAPP+A EVRIKI  T++C TD Y           P I GH                     V+P++  +CG+C+ C +  +N+C  +R+   +G+M  DG SRF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG GA +N AK E
Sbjct:    5 VIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLE 190          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH1_ZEALU (Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurians GN=ADH1 PE=3 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 7.706e-45
Identity = 81/105 (77.14%), Postives = 94/105 (89.52%), Query Frame = 2
Query:  257 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 571
            HVLPVFTGEC +C HC+S  SNMCDLLRIN  RGVM+ DG+SRFSING+P+ HF+GTSTFSEYTV+H GCVAKINP APLDKVC+LSCG+STGLGA++NVAKP +
Sbjct:   17 HVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPQAPLDKVCVLSCGISTGLGASINVAKPPK 121          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHX_RABIT (Alcohol dehydrogenase class-3 OS=Oryctolagus cuniculus GN=ADH5 PE=2 SV=3)

HSP 1 Score: 179.874 bits (455), Expect = 1.006e-44
Identity = 89/187 (47.59%), Postives = 118/187 (63.10%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            ++ CKAAVAWEAGKPL I+++EVAPP+A EVRIKI  T++C TD Y           P I GH                     V+P++  +CG+C+ C +  +N+C  +R+   +G+M  DG SRF+  G+ + H++GTSTFSEYTVV    VAKI+P APLDKVC+L CG+STG GA LN AK E
Sbjct:    5 VIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIFATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTNLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAALNTAKVE 190          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHX_HORSE (Alcohol dehydrogenase class-3 OS=Equus caballus GN=ADH5 PE=1 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 2.242e-44
Identity = 90/187 (48.13%), Postives = 118/187 (63.10%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            ++ CKAAVAWEAGKP+ I++VEVAPP+A EVRIKI  T++C TD Y           P I GH                     V+P++  +CG+C+ C +  +N+C  +R    +G+M  DG SRF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CGVSTG GA +N AK E
Sbjct:    5 VIKCKAAVAWEAGKPVSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPQTNLCQKIRTTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGAAVNTAKVE 190          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHX_UROHA (Alcohol dehydrogenase class-3 OS=Uromastyx hardwickii PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.928e-44
Identity = 90/187 (48.13%), Postives = 116/187 (62.03%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            ++ CKAAVAWEAGKPL I+++EVAPP+A EVR+KI  T++C TD Y           P I GH                     V+P++  +CG+C+ C +  +N+C  +R+   +GVM  DG SRF+  G+ V HF+GTSTFSEYTVV    + KIN  APLDKVC+L CGVSTG GA LN AK E
Sbjct:    4 VIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRVKIIATAVCHTDAYTLSGADPEGSFPVILGHEGAGIVESVGEGVTKFKPGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGVM-PDGTSRFTCKGKQVLHFMGTSTFSEYTVVADISLTKINASAPLDKVCLLGCGVSTGYGAALNTAKVE 189          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHH_GADMO (Alcohol dehydrogenase class-3 chain H OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 8.520e-44
Identity = 86/187 (45.99%), Postives = 116/187 (62.03%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            ++ CKAAVAWEAGKPL +++VEVAPP+A EVRIK+  T +C TD Y           P I GH                     V+P++  +CG+C+ C++  +N+C  +R+   RG+M  D  SRF+  G+ + HF+GTSTFSEYTVV    +A ++P APLDKVC+L CG+STG GA LN AK E
Sbjct:    6 VIKCKAAVAWEAGKPLSLEEVEVAPPRAGEVRIKVVATGVCHTDAYTLSGSDPEGAFPVILGHEGAGLVESVGEGVTKFKAGDTVIPLYVPQCGECKFCKNPKTNLCQKIRVTQGRGLM-PDNTSRFTCKGKQLFHFMGTSTFSEYTVVADISLANVDPKAPLDKVCLLGCGISTGYGAALNTAKVE 191          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHX_SPAAU (Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.453e-43
Identity = 88/187 (47.06%), Postives = 115/187 (61.50%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            ++ CKAAVAWE GKPL I++VEVAPP A EVRIK+  T +C TD Y         L P I GH                     V+P++  +CG+C+ C++  +N+C  +RI   +G +L D  SRF+  G+ V HF+GTSTFSEYTVV    +AK+N  AP+DKVC+L CG+STG GA LN AK E
Sbjct:    7 VIKCKAAVAWEPGKPLSIEEVEVAPPNAHEVRIKLFATGVCHTDAYTLSGSDPEGLFPVILGHEGAGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTNLCQKIRITQGQG-LLPDKTSRFTCKGKQVFHFMGTSTFSEYTVVADISLAKVNEKAPMDKVCLLGCGISTGYGAALNTAKVE 192          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHL3_ARATH (Alcohol dehydrogenase-like 3 OS=Arabidopsis thaliana GN=At1g32780 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.453e-43
Identity = 85/194 (43.81%), Postives = 119/194 (61.34%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP-LLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSIN---------GEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA 559
            ++TCKAAV W    PL+IQ++ V PPQ MEVR+KI Y+S+C TDL  W    +     PRI GH                    +V+P F GECG+C+ C+ + SN+C+   ++P++ VM+ DG +RFS            +P+ HFL TSTF+EYTV+ S CV KI+P +PL ++ +LSCGVSTG+GA  N+A
Sbjct:    8 VITCKAAVVWGPKVPLVIQEICVDPPQKMEVRVKILYSSICHTDLGCWNGTNEAERAFPRILGHEAVGIVESVGEGVKDVKEGDYVIPTFNGECGECKVCKREESNLCERYHVDPMKRVMVNDGGTRFSTTINKDGGSSQSQPIYHFLNTSTFTEYTVLDSACVVKIDPNSPLKQMSLLSCGVSTGVGAAWNIA 201          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHX_DROME (Alcohol dehydrogenase class-3 OS=Drosophila melanogaster GN=Fdh PE=1 SV=3)

HSP 1 Score: 175.252 bits (443), Expect = 2.479e-43
Identity = 86/187 (45.99%), Postives = 115/187 (61.50%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            ++TCKAAVAWEA KPL+I+D+EVAPP+A EVRIKI  T +C TD +         L P + GH                    HV+ ++  +C +C+ C+S  +N+C  +R+    GVM  +G SR S  G+ + HF+GTSTF+EYTVV    + KIN  APL+KVC+L CG+STG GA LN AK E
Sbjct:    8 VITCKAAVAWEAKKPLVIEDIEVAPPKAHEVRIKITATGVCHTDAFTLSGADPEGLFPVVLGHEGAGIVESVGEGVTNFKAGDHVIALYIPQCNECKFCKSGKTNLCQKIRLTQGAGVM-PEGTSRLSCKGQQLFHFMGTSTFAEYTVVADISLTKINEKAPLEKVCLLGCGISTGYGAALNTAKVE 193          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHL_GADMO (Alcohol dehydrogenase class-3 chain L OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.238e-43
Identity = 85/186 (45.70%), Postives = 117/186 (62.90%), Query Frame = 2
Query:   11 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            + C+AAVAWEAGKPL +++VEVAPPQA EVRIKI  T +C TD Y         + P + GH                     V+P++  +CG+C+ C++  +N+C  +R+   +G+M  +G SRFS NG+ + HF+G+STFSEYTVV    +AK++  APLDKVC+L C +STG GA LN AK E
Sbjct:    7 IRCRAAVAWEAGKPLSMEEVEVAPPQAGEVRIKIVATGICHTDAYTLSGSDPEGVFPSVLGHEGAGIVESVGEGVTKFKSGDAVIPLYVPQCGECKFCKNPKTNLCQKIRLTQGKGLM-PNGTSRFSCNGQVLFHFMGSSTFSEYTVVAEISLAKVHEKAPLDKVCLLGCAISTGYGAALNTAKVE 191          
The following BLAST results are available for this feature:
BLAST of CN181763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
ADHX_HUMAN5.901e-4547.59Alcohol dehydrogenase class-3 OS=Homo sapiens GN=A... [more]
ADH1_ZEALU7.706e-4577.14Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurian... [more]
ADHX_RABIT1.006e-4447.59Alcohol dehydrogenase class-3 OS=Oryctolagus cunic... [more]
ADHX_HORSE2.242e-4448.13Alcohol dehydrogenase class-3 OS=Equus caballus GN... [more]
ADHX_UROHA2.928e-4448.13Alcohol dehydrogenase class-3 OS=Uromastyx hardwic... [more]
ADHH_GADMO8.520e-4445.99Alcohol dehydrogenase class-3 chain H OS=Gadus mor... [more]
ADHX_SPAAU1.453e-4347.06Alcohol dehydrogenase class-3 OS=Sparus aurata PE=... [more]
ADHL3_ARATH1.453e-4343.81Alcohol dehydrogenase-like 3 OS=Arabidopsis thalia... [more]
ADHX_DROME2.479e-4345.99Alcohol dehydrogenase class-3 OS=Drosophila melano... [more]
ADHL_GADMO3.238e-4345.70Alcohol dehydrogenase class-3 chain L OS=Gadus mor... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001H03_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181763 ID=CN181763; Name=CN181763; organism=Citrus sinensis; type=EST; length=646bp
GAGGCTTATTCTTACCTGCAAAGCGGCGGTTGCTTGGGAAGCAGGGAAGC
CGCTGATCATTCAGGATGTGGAGGTTGCTCCTCCACAGGCCATGGAAGTG
AGGATCAAGATCAAATACACCTCTCTTTGCCGCACTGATCTCTATTTCTG
GGAGTCCAAGGGTCAGACACCCTTGCTTCCTCGCATATTTGGGCATGAAG
CAGCAGGGGTTGTGGAAAGTGTTGGGGAAGGTGTTTCAGACCTTGAAGTA
GGGGATCACGTACTCCCGGTATTTACAGGGGAGTGTGGGGATTGTAGACA
CTGCAGGTCGGATGTAAGCAATATGTGTGACCTTTTGAGAATAAACCCAG
TCAGGGGAGTCATGCTTGCTGATGGACAATCTAGGTTTTCCATCAATGGG
GAGCCTGTAAATCACTTCCTTGGAACATCCACCTTTAGCGAGTACACTGT
CGTTCATTCAGGCTGCGTTGCAAAGATCAATCCTCTGGCACCTTTGGACA
AAGTCTGCATTCTCAGTTGTGGCGTCTCAACAGGGCTAGGTGCAACTCTA
AATGTGGCAAAACCTGAAAGGGGTTCGTCAGTCGCTGTCTTTGGCCTCGG
AGCTGTTGGTTTAGCAGCTGCAGAAGGTGCAAGAATTGCTGGAGCA
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