CN181763

Overview
NameCN181763
Unique NameCN181763
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9742 contig Csv1_Contig9742:31..676. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHX_CAEEL (Alcohol dehydrogenase class-3 OS=Caenorhabditis elegans GN=H24K24.3 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 6.106e-42
Identity = 82/187 (43.85%), Postives = 114/187 (60.96%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            ++ CKAAVAW A  PL I+ ++VAPP+A EVR+KI YT++C TD Y  +      L P + GH                    HV+P++  +C +C +C++  +N+C  +RI+   G M  DG SRF+ NG+ + HF+G STFSEYTVV    + K+NP APL+KV +L CG+STG GA LN  K E
Sbjct:    8 VINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEGLFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNGFM-PDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGISTGYGAVLNTCKVE 193          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHX_DICDI (Alcohol dehydrogenase class-3 OS=Dictyostelium discoideum GN=adh5 PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.042e-41
Identity = 84/187 (44.92%), Postives = 110/187 (58.82%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            ++TCKAAVAWEA KPL+I+D+EV PPQ  EVRIKI YT +C TD Y         + P I GH                    HV+P++  ECG C+ C S+ +N+C  +RI   +G M  DG +RF   G+ + HF+GTSTFS+YTV+       +   APLDKVC+L CG++TG GA    AK E
Sbjct:    7 VITCKAAVAWEAKKPLVIEDIEVQPPQKGEVRIKILYTGVCHTDSYTLSGSDPEGIFPCILGHEGGGIVESIGEGVTSVKVGDHVIPLYIPECGTCKFCTSNKTNLCSKIRITQGKGQM-PDGTTRFKCKGKEIFHFMGTSTFSQYTVLPEISCCVVREDAPLDKVCLLGCGITTGFGAAKITAKVE 192          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH1_NAJNA (Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.320e-41
Identity = 84/187 (44.92%), Postives = 113/187 (60.43%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            ++ CKAA+AWE  KPL I+ +EVAPP+A EVRIKI  T +CR+D +      + PL P + GH                     V+P+F  +CG CR C+S   N+C    +N   G+M  DG SRF+  G+ ++HF+ TSTF+EYTVVH   V KI+P APL+KVC++ CG STG GA +  AK E
Sbjct:    6 VIKCKAAIAWELNKPLSIEQIEVAPPKAHEVRIKILATGVCRSDEHVISGAFRMPL-PMVLGHEAAGVVESVGEGVTCVKPGDKVIPLFAPQCGKCRACQSPKGNLCTSNDLNSGSGLM-PDGTSRFTCKGKSIHHFISTSTFTEYTVVHENSVVKIDPSAPLEKVCLIGCGFSTGYGAAMQTAKVE 190          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH1B_PANTR (Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH1B PE=2 SV=3)

HSP 1 Score: 167.548 bits (423), Expect = 5.169e-41
Identity = 87/185 (47.03%), Postives = 112/185 (60.54%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 562
            ++ CKAAV WE  KP  I+DVEVAPP+A EVRIK+    +CRTD +       TPL P I GH                     V+P+FT +CG CR C++  SN C    +   RG  L DG  RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG G+ +NVAK
Sbjct:    7 VIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPL-PAILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGT-LQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAK 189          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH1B_HUMAN (Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B PE=1 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 8.817e-41
Identity = 87/185 (47.03%), Postives = 112/185 (60.54%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 562
            ++ CKAAV WE  KP  I+DVEVAPP+A EVRIK+    +CRTD +       TPL P I GH                     V+P+FT +CG CR C++  SN C    +   RG  L DG  RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG G+ +NVAK
Sbjct:    7 VIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPL-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGT-LQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAK 189          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHX_OCTVU (Alcohol dehydrogenase class-3 OS=Octopus vulgaris PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.565e-40
Identity = 82/187 (43.85%), Postives = 114/187 (60.96%), Query Frame = 2
Query:   11 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 571
            + C AA+AWEA KPL I++VEVAPP++ EVRIKI ++ +C TD Y  E      + P I GH                     V+P++  +C +C+ C +  +N+C  +R+   +GVM  DG +RF+  G+ V HF+G STFSE+TVV    +AK+NP A LDKVC+L CG+STG GA LN A  E+
Sbjct:    8 IKCMAAIAWEAKKPLSIEEVEVAPPKSGEVRIKILHSGVCHTDAYTLEGIDPEGIFPVILGHEGAGIVESIGEGVTSVKPGDTVIPLYVPQCYECKFCLNPKTNLCQKIRVTQGKGVM-PDGTTRFTCKGKEVFHFMGCSTFSEFTVVAEISIAKVNPKAALDKVCLLGCGISTGYGAALNTAAVEK 193          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH1B_PAPHA (Alcohol dehydrogenase 1B OS=Papio hamadryas GN=ADH1B PE=2 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 2.565e-40
Identity = 85/185 (45.95%), Postives = 112/185 (60.54%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 562
            ++ CKAAV WE  KP  I+DVEVAPP+A EVRIK+    +CRTD +       +PL P I GH                     V+P+FT +CG CR C+S   N C    ++  RG  L DG  RF+  G+P++HF+GTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG G+ +NVAK
Sbjct:    7 VIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVSPL-PAILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKSPEGNYCVKNDLSNPRGT-LQDGTRRFTCRGKPIHHFVGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAK 189          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH4_STRCA (Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH4 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 5.715e-40
Identity = 79/192 (41.15%), Postives = 119/192 (61.98%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVM-----LADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            ++ CKAA+AWEAGKPL ++++EV+PP+  EVR+KI  T +CRTD +      +  + P I GH                     V+P++  +CG C+ C +  +N+C+  +I+ ++  +     ++DG SRF+  G+P+ HF+GTSTFSEYTVV    +AKI+  APLDKVC++ CG STG GA +N A+ E
Sbjct:    6 VIKCKAAIAWEAGKPLSVEEIEVSPPKDHEVRVKIVATGVCRTDEHAINPSFKEGVFPVILGHEGAGIVESIGQGVSKFKPGDKVIPLYMPQCGHCKFCLNPKTNLCE--KISKIKTPISDQEVMSDGTSRFTCKGKPIYHFMGTSTFSEYTVVSESSLAKIDAAAPLDKVCLIGCGFSTGYGAAINTAQVE 195          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH1_RABIT (Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.273e-39
Identity = 84/185 (45.41%), Postives = 113/185 (61.08%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 562
            ++ CKAAV W+  KP  I++VEVAPP+A EVRIK+  T +CR+D +        PL P I GH                     V+P+FT +CG CR C+   SN C +  +   +G ML DG SRF+  G+P++HF+GTSTFS+YTVV    VAKI+  APL+KVC++ CG STG G+ + VAK
Sbjct:    7 VIKCKAAVLWQLNKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHAVTGSIAVPL-PVILGHEAAGIVESIGEGVTTVKPGDKVIPLFTPQCGKCRICKHPESNFCLINDLGKPKG-MLLDGTSRFTCKGKPIHHFIGTSTFSQYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGSAVKVAK 189          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: FADH_CANMA (S-(hydroxymethyl)glutathione dehydrogenase OS=Candida maltosa GN=FDH1 PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.663e-39
Identity = 85/187 (45.45%), Postives = 108/187 (57.75%), Query Frame = 2
Query:   11 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA---TLNVAK 562
            +TCKAAVAWEA KPL I+DV VAPP+  EVRIK+  T +C TD Y           P I GH                    HV+ ++T ECG+C+ C+S  +N+C  +R    +GVM  DG SRF+  G+ + HF+G STFS+YTVV    V  INP A  DK C+L CG++TG GA   T NV K
Sbjct:   10 ITCKAAVAWEAAKPLSIEDVTVAPPKRHEVRIKLYDTGVCHTDAYTLSGVDPEGAFPVILGHEGAGIVESIGEGVTNVKVGDHVIALYTPECGECKFCKSGKTNLCGKIRATQGKGVM-PDGTSRFTCKGKEILHFMGCSTFSQYTVVADISVVAINPKAEFDKACLLGCGITTGYGAATITANVQK 195          
The following BLAST results are available for this feature:
BLAST of CN181763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
ADHX_CAEEL6.106e-4243.85Alcohol dehydrogenase class-3 OS=Caenorhabditis el... [more]
ADHX_DICDI1.042e-4144.92Alcohol dehydrogenase class-3 OS=Dictyostelium dis... [more]
ADH1_NAJNA2.320e-4144.92Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1[more]
ADH1B_PANTR5.169e-4147.03Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH... [more]
ADH1B_HUMAN8.817e-4147.03Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B ... [more]
ADHX_OCTVU2.565e-4043.85Alcohol dehydrogenase class-3 OS=Octopus vulgaris ... [more]
ADH1B_PAPHA2.565e-4045.95Alcohol dehydrogenase 1B OS=Papio hamadryas GN=ADH... [more]
ADH4_STRCA5.715e-4041.15Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH... [more]
ADH1_RABIT1.273e-3945.41Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus G... [more]
FADH_CANMA1.663e-3945.45S-(hydroxymethyl)glutathione dehydrogenase OS=Cand... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001H03_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181763 ID=CN181763; Name=CN181763; organism=Citrus sinensis; type=EST; length=646bp
GAGGCTTATTCTTACCTGCAAAGCGGCGGTTGCTTGGGAAGCAGGGAAGC
CGCTGATCATTCAGGATGTGGAGGTTGCTCCTCCACAGGCCATGGAAGTG
AGGATCAAGATCAAATACACCTCTCTTTGCCGCACTGATCTCTATTTCTG
GGAGTCCAAGGGTCAGACACCCTTGCTTCCTCGCATATTTGGGCATGAAG
CAGCAGGGGTTGTGGAAAGTGTTGGGGAAGGTGTTTCAGACCTTGAAGTA
GGGGATCACGTACTCCCGGTATTTACAGGGGAGTGTGGGGATTGTAGACA
CTGCAGGTCGGATGTAAGCAATATGTGTGACCTTTTGAGAATAAACCCAG
TCAGGGGAGTCATGCTTGCTGATGGACAATCTAGGTTTTCCATCAATGGG
GAGCCTGTAAATCACTTCCTTGGAACATCCACCTTTAGCGAGTACACTGT
CGTTCATTCAGGCTGCGTTGCAAAGATCAATCCTCTGGCACCTTTGGACA
AAGTCTGCATTCTCAGTTGTGGCGTCTCAACAGGGCTAGGTGCAACTCTA
AATGTGGCAAAACCTGAAAGGGGTTCGTCAGTCGCTGTCTTTGGCCTCGG
AGCTGTTGGTTTAGCAGCTGCAGAAGGTGCAAGAATTGCTGGAGCA
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