CN181763

Overview
NameCN181763
Unique NameCN181763
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9742 contig Csv1_Contig9742:31..676. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH1_RAT (Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Adh1 PE=1 SV=3)

HSP 1 Score: 162.155 bits (409), Expect = 2.172e-39
Identity = 84/186 (45.16%), Postives = 113/186 (60.75%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMC-DLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 562
            ++ CKAAV WE  KP  I+D+EVAPP+A EVRIK+  T +CR+D +       TPL P + GH                     V+P+F+ +CG CR C+   SN+C     +   +G +L DG SRFS  G+P++HF+ TSTFS+YTVV    VAKI+  APLDKVC++ CG STG G+ + VAK
Sbjct:    7 VIKCKAAVLWEPHKPFTIEDIEVAPPKAHEVRIKMVATGVCRSDDHAVSGSLFTPL-PAVLGHEGAGIVESIGEGVTCVKPGDKVIPLFSPQCGKCRICKHPESNLCCQTKNLTQPKGALL-DGTSRFSCRGKPIHHFISTSTFSQYTVVDDIAVAKIDAAAPLDKVCLIGCGFSTGYGSAVQVAK 190          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH1_COTJA (Alcohol dehydrogenase 1 OS=Coturnix coturnix japonica GN=ADH1 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.172e-39
Identity = 82/187 (43.85%), Postives = 111/187 (59.36%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            ++ CKAAV WEA KP  +++VEVAPP+A EVRIKI  T +CR+D +        P  P I GH                     V+P+F  +CG+CR C S   N+C    ++     ++ADG +RF+  G+ ++HF+GTSTF+EYTVVH    AKI+  APL+KVC++ CG STG GA L  AK E
Sbjct:    6 VIKCKAAVLWEANKPFSLEEVEVAPPKAHEVRIKIVATGICRSDDHVVTGALAMPF-PVILGHEAAGVVESVGEKVTLLKPGDAVIPLFVPQCGECRSCLSTKGNLCIKNDLSSSPTGLMADGTTRFTCKGKAIHHFIGTSTFTEYTVVHETAAAKIDSAAPLEKVCLIGCGFSTGYGAVLQTAKVE 191          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH1_CHICK (Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 2.836e-39
Identity = 82/187 (43.85%), Postives = 111/187 (59.36%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            ++ CKAAV WEA KP  +++VEVAPP+A EVRIKI  T +CR+D +        P  P I GH                     V+P+F  +CG+CR C S   N+C    ++     ++ADG +RF+  G+ ++HF+GTSTF+EYTVVH    AKI+  APL+KVC++ CG STG GA L  AK E
Sbjct:    7 VIKCKAAVLWEANKPFSLEEVEVAPPKAHEVRIKIVATGICRSDDHVVTGALAMPF-PIILGHEAAGVIESVGEKVTSLKPGDAVIPLFVPQCGECRSCLSTKGNLCIKNDLSSSPTGLMADGTTRFTCKGKAIHHFVGTSTFTEYTVVHETAAAKIDSAAPLEKVCLIGCGFSTGYGAVLQTAKVE 192          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH1A_UROHA (Alcohol dehydrogenase 1A OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 4.838e-39
Identity = 81/187 (43.32%), Postives = 111/187 (59.36%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            ++ CKAA+AWE  KPL I+ +EVAPP+A EVRIKI  T +CR+D +      + PL P + GH                     V+P+F  +CG C  CRS   N+C    ++   G+M  DG SRF+  G+ ++HF+ TS+F+EYTVVH   V KI+  APL+KVC++ CG STG GA +  AK E
Sbjct:    6 VIKCKAAIAWEIKKPLSIEQIEVAPPKAHEVRIKILATGICRSDDHVISGAFKMPL-PMVLGHEAAGVVESVGEGVTCVKPGDKVIPLFVPQCGKCSSCRSTRGNLCTSNDLSAATGLM-PDGTSRFTCKGKSLHHFISTSSFTEYTVVHENSVVKIDAAAPLEKVCLIGCGFSTGYGAAVETAKVE 190          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH1_GEOBU (Alcohol dehydrogenase 1 OS=Geomys bursarius GN=ADH1 PE=2 SV=3)

HSP 1 Score: 158.688 bits (400), Expect = 5.632e-39
Identity = 81/188 (43.09%), Postives = 111/188 (59.04%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 571
            ++ C+AAV WE  KP  I++VEVAPP+A EVRIKI  T +CR+D +       TPL P I GH                     V+P+F  +CG CR C+   SN+C    +   +G ++ DG SRF+  G+P++HFLG +TFSEYTVV    V KI+  +PL+KVC++ CG STG G+ + V K  R
Sbjct:    7 VIKCRAAVLWEKNKPFSIEEVEVAPPKAYEVRIKIVATGICRSDDHVVNGSIITPL-PAILGHEAGGIVESIGEGVTTVKPGDKVIPLFVPQCGKCRACKHPESNLCKHGDLGRAQGTLM-DGTSRFTCKGKPIHHFLGVTTFSEYTVVSEISVTKIDATSPLEKVCLIGCGFSTGYGSAVKVGKVAR 192          

HSP 2 Score: 21.9422 bits (45), Expect = 5.632e-39
Identity = 9/28 (32.14%), Postives = 13/28 (46.43%), Query Frame = 1
Query:  550 KCGKT*KGFVSRCLWPRSCWFSSCRRCK 633
            K GK  +G +  C+W      S+   CK
Sbjct:  186 KVGKVARGSICSCVWSGRVGLSAIIGCK 213          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH1_GEOAT (Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH1 PE=2 SV=3)

HSP 1 Score: 158.688 bits (400), Expect = 5.632e-39
Identity = 81/188 (43.09%), Postives = 111/188 (59.04%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 571
            ++ C+AAV WE  KP  I++VEVAPP+A EVRIKI  T +CR+D +       TPL P I GH                     V+P+F  +CG CR C+   SN+C    +   +G ++ DG SRF+  G+P++HFLG +TFSEYTVV    V KI+  +PL+KVC++ CG STG G+ + V K  R
Sbjct:    7 VIKCRAAVLWEKNKPFSIEEVEVAPPKAYEVRIKIVATGICRSDDHVVNGSIITPL-PAILGHEAGGIVESIGEGVTTVKPGDKVIPLFVPQCGKCRACKHPESNLCTHGDLGRAQGTLM-DGTSRFTCKGKPIHHFLGVTTFSEYTVVSEISVTKIDAASPLEKVCLIGCGFSTGYGSAVKVGKVAR 192          

HSP 2 Score: 21.9422 bits (45), Expect = 5.632e-39
Identity = 9/28 (32.14%), Postives = 13/28 (46.43%), Query Frame = 1
Query:  550 KCGKT*KGFVSRCLWPRSCWFSSCRRCK 633
            K GK  +G +  C+W      S+   CK
Sbjct:  186 KVGKVARGSICACVWSGRVGLSAIIGCK 213          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH1_GADCA (Alcohol dehydrogenase 1 OS=Gadus callarias PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 8.253e-39
Identity = 85/187 (45.45%), Postives = 109/187 (58.29%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            ++ CKAAVAWEA KPL+I+++EV  P A E+RIKI  T +C TDLY           P + GH                     V+P+F  +CG+CR C+S  +N C     N    VM +  ++RF+  G  V  FLGTSTFS+YTVV+   VAKI+P APLD VC+L CGVSTG GA +N AK E
Sbjct:    6 VIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM-SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVE 191          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH1E_HORSE (Alcohol dehydrogenase E chain OS=Equus caballus PE=1 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 8.253e-39
Identity = 85/185 (45.95%), Postives = 112/185 (60.54%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 562
            ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TPL P I GH                     V+P+FT +CG CR C+    N C    ++  RG M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG G+ + VAK
Sbjct:    7 VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAK 189          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: FRMA_SYNY3 (S-(hydroxymethyl)glutathione dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=frmA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.408e-38
Identity = 82/181 (45.30%), Postives = 108/181 (59.67%), Query Frame = 2
Query:   20 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 562
            +AAVA+E GKPL I +++VAPPQ  EV +KI +T +C TD +         L P + GH                    HV+P++T ECG C  CRS  +N+C  +R    +GVM  DG SRFS NG+ + H++G STFSEYTVV    +AKINP A  + VC+L CGV+TG+GA  N AK
Sbjct:    4 RAAVAFEVGKPLQIVEIDVAPPQQGEVLVKITHTGVCHTDAFTLSGDDPEGLFPVVLGHEGAGIVVEVGEGVTSVQLGDHVIPLYTAECGKCLFCRSGKTNLCVAVRATQGKGVM-PDGTSRFSYNGQSLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAK 183          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH1G_PAPHA (Alcohol dehydrogenase 1C OS=Papio hamadryas GN=ADH1C PE=2 SV=3)

HSP 1 Score: 159.458 bits (402), Expect = 1.408e-38
Identity = 83/185 (44.86%), Postives = 110/185 (59.46%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 562
            ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+    +CR+D +       TPL P I GH                     V+P+FT +CG CR C++  SN C    ++  RG M  DG  RF+  G+P++HFLG STFS+YTVV    VAKI+  +PL+KVC++ CG STG G  + VAK
Sbjct:    7 VIKCKAAVLWEVKKPFSIEEVEVAPPKAHEVRIKMVAVGICRSDDHVVSGTLVTPL-PAILGHEAAGIVEGVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCFKNDLSNPRGTM-QDGTRRFTCGGKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGPAVKVAK 189          
The following BLAST results are available for this feature:
BLAST of CN181763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
ADH1_RAT2.172e-3945.16Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Ad... [more]
ADH1_COTJA2.172e-3943.85Alcohol dehydrogenase 1 OS=Coturnix coturnix japon... [more]
ADH1_CHICK2.836e-3943.85Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 P... [more]
ADH1A_UROHA4.838e-3943.32Alcohol dehydrogenase 1A OS=Uromastyx hardwickii P... [more]
ADH1_GEOBU5.632e-3943.09Alcohol dehydrogenase 1 OS=Geomys bursarius GN=ADH... [more]
ADH1_GEOAT5.632e-3943.09Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH... [more]
ADH1_GADCA8.253e-3945.45Alcohol dehydrogenase 1 OS=Gadus callarias PE=1 SV... [more]
ADH1E_HORSE8.253e-3945.95Alcohol dehydrogenase E chain OS=Equus caballus PE... [more]
FRMA_SYNY31.408e-3845.30S-(hydroxymethyl)glutathione dehydrogenase OS=Syne... [more]
ADH1G_PAPHA1.408e-3844.86Alcohol dehydrogenase 1C OS=Papio hamadryas GN=ADH... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001H03_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181763 ID=CN181763; Name=CN181763; organism=Citrus sinensis; type=EST; length=646bp
GAGGCTTATTCTTACCTGCAAAGCGGCGGTTGCTTGGGAAGCAGGGAAGC
CGCTGATCATTCAGGATGTGGAGGTTGCTCCTCCACAGGCCATGGAAGTG
AGGATCAAGATCAAATACACCTCTCTTTGCCGCACTGATCTCTATTTCTG
GGAGTCCAAGGGTCAGACACCCTTGCTTCCTCGCATATTTGGGCATGAAG
CAGCAGGGGTTGTGGAAAGTGTTGGGGAAGGTGTTTCAGACCTTGAAGTA
GGGGATCACGTACTCCCGGTATTTACAGGGGAGTGTGGGGATTGTAGACA
CTGCAGGTCGGATGTAAGCAATATGTGTGACCTTTTGAGAATAAACCCAG
TCAGGGGAGTCATGCTTGCTGATGGACAATCTAGGTTTTCCATCAATGGG
GAGCCTGTAAATCACTTCCTTGGAACATCCACCTTTAGCGAGTACACTGT
CGTTCATTCAGGCTGCGTTGCAAAGATCAATCCTCTGGCACCTTTGGACA
AAGTCTGCATTCTCAGTTGTGGCGTCTCAACAGGGCTAGGTGCAACTCTA
AATGTGGCAAAACCTGAAAGGGGTTCGTCAGTCGCTGTCTTTGGCCTCGG
AGCTGTTGGTTTAGCAGCTGCAGAAGGTGCAAGAATTGCTGGAGCA
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