CN181763

Overview
NameCN181763
Unique NameCN181763
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9742 contig Csv1_Contig9742:31..676. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH1_GEOKN (Alcohol dehydrogenase 1 OS=Geomys knoxjonesi GN=ADH1 PE=2 SV=3)

HSP 1 Score: 157.147 bits (396), Expect = 1.622e-38
Identity = 80/188 (42.55%), Postives = 110/188 (58.51%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 571
            ++ C+AAV WE  KP  I++VEV PP+A EVRIKI  T +CR+D +       TPL P I GH                     V+P+F  +CG CR C+   SN+C    +   +G ++ DG SRF+  G+P++HFLG +TFSEYTVV    V KI+  +PL+KVC++ CG STG G+ + V K  R
Sbjct:    7 VIKCRAAVLWEKNKPFSIEEVEVVPPKAYEVRIKIVATGICRSDDHVVNGSIITPL-PAILGHEAGGIVESIGEGVTTVKPGDKVIPLFVPQCGKCRACKHPESNLCTHGDLGRAQGTLM-DGTSRFTCKGKPIHHFLGVTTFSEYTVVSEISVTKIDAASPLEKVCLIGCGFSTGYGSAVKVGKVAR 192          

HSP 2 Score: 21.9422 bits (45), Expect = 1.622e-38
Identity = 9/28 (32.14%), Postives = 13/28 (46.43%), Query Frame = 1
Query:  550 KCGKT*KGFVSRCLWPRSCWFSSCRRCK 633
            K GK  +G +  C+W      S+   CK
Sbjct:  186 KVGKVARGSICSCVWSGRVGLSAIIGCK 213          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHX_MYXGL (Alcohol dehydrogenase class-3 OS=Myxine glutinosa PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.839e-38
Identity = 77/187 (41.18%), Postives = 111/187 (59.36%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            ++ CKAAVAWEA KPL ++++EVAPP+A EVR+K+  T++C TD Y           P + GH                     V+P++  +CG+C+ C +  +N+C  +R+   +G M+ DG SR +  G+ + HF+G STFSEY VV    + ++ P AP D+VC+L CGVSTG GA LN AK E
Sbjct:    7 VIHCKAAVAWEAKKPLSLEEIEVAPPKAHEVRMKVLATAVCHTDAYTLSGVDPEGSFPVVLGHEGAGIVESVGEGVTKFKPGDSVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-MMPDGTSRLTCRGKSLYHFMGASTFSEYAVVADISLCRVAPEAPPDRVCLLGCGVSTGYGAPLNTAKVE 192          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH1G_HUMAN (Alcohol dehydrogenase 1C OS=Homo sapiens GN=ADH1C PE=1 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 3.136e-38
Identity = 82/185 (44.32%), Postives = 111/185 (60.00%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 562
            ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+    +CR+D +       TPL P I GH                     V+P+FT +CG CR C++  SN C    +   RG  L DG  RF+ +G+P++HF+G STFS+YTVV    VAKI+  +PL+KVC++ CG STG G+ + VAK
Sbjct:    7 VIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVSGNLVTPL-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPRGT-LQDGTRRFTCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAK 189          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH1_STRCA (Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH1 PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.096e-38
Identity = 83/187 (44.39%), Postives = 108/187 (57.75%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            ++ CKAAV WE  KP  I++VEVAPP+A EVR+KI  T +CR+D +        P  P I GH                     V+P+F  +CG+C  C S   N+C    I P   +M  DG SRF+  G+ ++HF GTSTF+EYTV+H   VAKI+  APL+KVC++ CG STG GA L  AK E
Sbjct:    6 VIKCKAAVLWEPKKPFSIEEVEVAPPKAHEVRVKIIATGICRSDDHVISGVLVMPF-PIILGHEAAGVVESVGEGVTSVKPGDKVIPLFVPQCGECSVCLSTKGNLCRKNDIGPASALM-PDGTSRFTCKGKAIHHFAGTSTFTEYTVLHETAVAKIDAAAPLEKVCLIGCGFSTGYGAALQTAKVE 190          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH1_APTAU (Alcohol dehydrogenase 1 OS=Apteryx australis GN=ADH1 PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 4.096e-38
Identity = 83/187 (44.39%), Postives = 108/187 (57.75%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            ++ CKAAV WE  KP  I++VEVAPP+A EVRIKI  T +CR+D +        P  P I GH                     V+P+F  +CG+C  C S   N+C    I    G+M  DG +RF+  G+ ++HF+GTSTF+EYTVVH   VAKI   APL+KVC++ CG STG GA +  AK E
Sbjct:    7 VIKCKAAVLWEPKKPFSIEEVEVAPPKAHEVRIKILATGICRSDDHVITGALVRPF-PIILGHEAAGVVESVGEGVTSVKPGDKVIPLFVPQCGECSACLSTKGNLCSKNDIGSASGLM-PDGTTRFTCKGKAIHHFIGTSTFTEYTVVHETAVAKIAAAAPLEKVCLIGCGFSTGYGAAVQTAKVE 191          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH1_ALLMI (Alcohol dehydrogenase 1 OS=Alligator mississippiensis PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.096e-38
Identity = 81/187 (43.32%), Postives = 110/187 (58.82%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            ++ CKAA+ WE  KP  I+++EVAPP+A EVRIKI  T +CR+D +        PL P I GH                     V+P+F  +CG+C  C     N+C    +    G+M ADG SRF+  G+ ++HF+GTSTF+EYTVVH   VA+I+  APL+KVC++ CG STG GA +  AK E
Sbjct:    6 VIKCKAAITWEIKKPFSIEEIEVAPPKAHEVRIKILATGICRSDDHVTAGLLTMPL-PMILGHEAAGVVESTGEGVTSLKPGDKVIPLFVPQCGECMPCLKSNGNLCIRNDLGSPSGLM-ADGTSRFTCKGKDIHHFIGTSTFTEYTVVHETAVARIDAAAPLEKVCLIGCGFSTGYGAAVKDAKVE 190          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: FRMA_SHISS (S-(hydroxymethyl)glutathione dehydrogenase OS=Shigella sonnei (strain Ss046) GN=frmA PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.556e-37
Identity = 78/181 (43.09%), Postives = 109/181 (60.22%), Query Frame = 2
Query:   20 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 562
            +AAVA+  GKPL I +++VAPP+  EV IK+ +T +C TD +         + P + GH                    HV+P++T ECG+C  CRS  +N+C  +R    +G+M  DG +RFS NG+P+ H++G STFSEYTVV    +AKINP A  + VC+L CGV+TG+GA  N AK
Sbjct:    4 RAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLM-PDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAK 183          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: FRMA_ECOUT (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.556e-37
Identity = 78/181 (43.09%), Postives = 109/181 (60.22%), Query Frame = 2
Query:   20 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 562
            +AAVA+  GKPL I +++VAPP+  EV IK+ +T +C TD +         + P + GH                    HV+P++T ECG+C  CRS  +N+C  +R    +G+M  DG +RFS NG+P+ H++G STFSEYTVV    +AKINP A  + VC+L CGV+TG+GA  N AK
Sbjct:    4 RAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLM-PDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAK 183          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: FRMA_ECOSM (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.556e-37
Identity = 78/181 (43.09%), Postives = 109/181 (60.22%), Query Frame = 2
Query:   20 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 562
            +AAVA+  GKPL I +++VAPP+  EV IK+ +T +C TD +         + P + GH                    HV+P++T ECG+C  CRS  +N+C  +R    +G+M  DG +RFS NG+P+ H++G STFSEYTVV    +AKINP A  + VC+L CGV+TG+GA  N AK
Sbjct:    4 RAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLM-PDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAK 183          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: FRMA_ECOLI (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain K12) GN=frmA PE=1 SV=3)

HSP 1 Score: 155.992 bits (393), Expect = 1.556e-37
Identity = 78/181 (43.09%), Postives = 109/181 (60.22%), Query Frame = 2
Query:   20 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 562
            +AAVA+  GKPL I +++VAPP+  EV IK+ +T +C TD +         + P + GH                    HV+P++T ECG+C  CRS  +N+C  +R    +G+M  DG +RFS NG+P+ H++G STFSEYTVV    +AKINP A  + VC+L CGV+TG+GA  N AK
Sbjct:    4 RAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLM-PDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAK 183          
The following BLAST results are available for this feature:
BLAST of CN181763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
ADH1_GEOKN1.622e-3842.55Alcohol dehydrogenase 1 OS=Geomys knoxjonesi GN=AD... [more]
ADHX_MYXGL1.839e-3841.18Alcohol dehydrogenase class-3 OS=Myxine glutinosa ... [more]
ADH1G_HUMAN3.136e-3844.32Alcohol dehydrogenase 1C OS=Homo sapiens GN=ADH1C ... [more]
ADH1_STRCA4.096e-3844.39Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH... [more]
ADH1_APTAU4.096e-3844.39Alcohol dehydrogenase 1 OS=Apteryx australis GN=AD... [more]
ADH1_ALLMI4.096e-3843.32Alcohol dehydrogenase 1 OS=Alligator mississippien... [more]
FRMA_SHISS1.556e-3743.09S-(hydroxymethyl)glutathione dehydrogenase OS=Shig... [more]
FRMA_ECOUT1.556e-3743.09S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOSM1.556e-3743.09S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOLI1.556e-3743.09S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001H03_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181763 ID=CN181763; Name=CN181763; organism=Citrus sinensis; type=EST; length=646bp
GAGGCTTATTCTTACCTGCAAAGCGGCGGTTGCTTGGGAAGCAGGGAAGC
CGCTGATCATTCAGGATGTGGAGGTTGCTCCTCCACAGGCCATGGAAGTG
AGGATCAAGATCAAATACACCTCTCTTTGCCGCACTGATCTCTATTTCTG
GGAGTCCAAGGGTCAGACACCCTTGCTTCCTCGCATATTTGGGCATGAAG
CAGCAGGGGTTGTGGAAAGTGTTGGGGAAGGTGTTTCAGACCTTGAAGTA
GGGGATCACGTACTCCCGGTATTTACAGGGGAGTGTGGGGATTGTAGACA
CTGCAGGTCGGATGTAAGCAATATGTGTGACCTTTTGAGAATAAACCCAG
TCAGGGGAGTCATGCTTGCTGATGGACAATCTAGGTTTTCCATCAATGGG
GAGCCTGTAAATCACTTCCTTGGAACATCCACCTTTAGCGAGTACACTGT
CGTTCATTCAGGCTGCGTTGCAAAGATCAATCCTCTGGCACCTTTGGACA
AAGTCTGCATTCTCAGTTGTGGCGTCTCAACAGGGCTAGGTGCAACTCTA
AATGTGGCAAAACCTGAAAGGGGTTCGTCAGTCGCTGTCTTTGGCCTCGG
AGCTGTTGGTTTAGCAGCTGCAGAAGGTGCAAGAATTGCTGGAGCA
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