CN181763

Overview
NameCN181763
Unique NameCN181763
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: FADH1_SCHPO (Probable S-(hydroxymethyl)glutathione dehydrogenase 1 OS=Schizosaccharomyces pombe GN=SPBC1539.07c PE=2 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 8.540e-36
Identity = 75/186 (40.32%), Postives = 109/186 (58.60%), Query Frame = 2
Query:   11 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            +TCKAAVAW A +PL I+D++VAPP+A EVR+K+ ++++C TD Y           P + GH                    HV+ ++T EC +C+ CRS  +N+C  +R    RG+M  DG SRFS   + + H++G S+FS+YTVV    +  I+  APL  +C+L CGV+TG GA  + AK E
Sbjct:    8 ITCKAAVAWGAKEPLSIEDIQVAPPKAHEVRVKVDWSAVCHTDAYTLSGVDPEGAFPIVLGHEGAGIVESIGEGVINVRPGDHVILLYTPECKECKFCRSGKTNLCSKIRETQGRGLM-PDGTSRFSCRDKTLLHYMGCSSFSQYTVVADISLVAISHSAPLRSICLLGCGVTTGFGAVTHSAKVE 192          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH1B_UROHA (Alcohol dehydrogenase 1B OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 8.540e-36
Identity = 78/185 (42.16%), Postives = 104/185 (56.22%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 562
            ++ CKAAV WE  KP  I ++EVAPP+A EVRIKI  + +CR+D +      +    P I GH                     V+P+F  +CG+C  CR    N+C    + P  G +L DG SRF+  G+PV HF+ T TF+EYTV     V KI+  APL+KVC++ CG STG GA +N AK
Sbjct:    6 VIKCKAAVVWEPKKPFSIVEIEVAPPKAHEVRIKILASGICRSDDHVLSGALKVNF-PIILGHEAAGVVESVGEGVTSMKPGDKVIPIFLPQCGECNSCRHPRGNVCKKSELGPFTG-LLYDGTSRFTYQGKPVYHFVRTGTFTEYTVAPEDSVVKIDASAPLEKVCLIGCGFSTGYGAAINSAK 188          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHL1_ARATH (Alcohol dehydrogenase-like 1 OS=Arabidopsis thaliana GN=At1g22430 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.903e-35
Identity = 84/188 (44.68%), Postives = 107/188 (56.91%), Query Frame = 2
Query:   11 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE-SKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRF-SINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            +TCKAA+  +AG+ L+I+D+ V PPQA EVRIKI  TSLC TDL FW+ S G     PRI GH                     VLPVF   C +C+ C+S  +N CD    + +         SRF   +GE ++HFL  S+FSEYTVV    + KI+P  P+DK  +LSCGVSTG+GA   VA  E
Sbjct:   14 ITCKAAICRKAGEALVIEDIHVDPPQAYEVRIKILCTSLCHTDLTFWKLSFGPISRFPRILGHEAVGVVESIGENVDGFKQGDVVLPVFHPYCEECKDCKSSKTNWCDRYAEDFISNTRRYGMASRFKDSSGEVIHHFLFVSSFSEYTVVDIAHLVKISPEIPVDKAALLSCGVSTGIGAAWKVANVE 201          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHL7_ARATH (Alcohol dehydrogenase-like 7 OS=Arabidopsis thaliana GN=At5g42250 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.485e-35
Identity = 78/188 (41.49%), Postives = 107/188 (56.91%), Query Frame = 2
Query:   11 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFS-INGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 571
            + CKAAV+ +AG+PL+++++ VAPPQ  EVRI+I  T+LC +D+ FW+ +      PRI GH                     VLP F  +CGDC  C+S  SN+C          +   D  SRF+ +NGE + HFL  S+FSEYTV+    V KI+   P  + C+LSCGVSTG+GA    AK E+
Sbjct:   17 IRCKAAVSRKAGEPLVMEEIMVAPPQPFEVRIRIICTALCHSDVTFWKLQVPPACFPRILGHEAIGVVESVGENVKEVVEGDTVLPTFMPDCGDCVDCKSHKSNLCSKFPFKVSPWMPRYDNSSRFTDLNGETLFHFLNVSSFSEYTVLDVANVVKIDSSIPPSRACLLSCGVSTGVGAAWETAKVEK 204          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHI_RHOS4 (Alcohol dehydrogenase class-3 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=adhI PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 7.230e-35
Identity = 77/184 (41.85%), Postives = 106/184 (57.61%), Query Frame = 2
Query:   20 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFS-INGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            +AAVA EAGKPL I +V +  P+A EV ++IK T +C TD +         + P I GH                    HV+P++T EC  C  C S  +N+C  +R    +G+M  DG SRFS ++G P+ H++G STFS YTV+    VAK+ P AP DK+C + CGV+TG+GA +N AK E
Sbjct:    4 RAAVAVEAGKPLEIMEVNLEGPKAGEVMVEIKATGICHTDEFTLSGADPEGMFPAILGHEGAGVVVEVGPGVTSVKPGDHVIPLYTPECRQCPSCLSQKTNLCTAIRGTQGQGLM-PDGTSRFSMLDGTPILHYMGCSTFSNYTVLPEIAVAKVRPDAPFDKICYIGCGVTTGIGAVINTAKVE 186          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHP_RABIT (Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctolagus cuniculus GN=ADH2-1 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 9.442e-35
Identity = 76/188 (40.43%), Postives = 108/188 (57.45%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLL--RINP-VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 562
            ++ CKAA+AWEAGKPL I++VEVAPP+A EVR++I    LCR+D +    K +   LP I GH                     V+P++   C  C+ C S ++N C+      NP +   ++ D  SRF+  G+ + HF G S FS+YTVV    +AKI+  A L++VC++ CG STG GA +N AK
Sbjct:    7 VIKCKAAIAWEAGKPLSIEEVEVAPPKAHEVRVQINAAGLCRSDTHVINPKFEGAFLPVILGHEGAGIVESVGPGVTNVKPGDKVIPLYIPHCKKCKFCLSPLTNFCEKFCKGKNPLIEQELMEDKTSRFTCKGKSIYHFFGISAFSQYTVVKDVNLAKIDDDANLERVCLIGCGFSTGYGAAINTAK 194          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH7_HUMAN (Alcohol dehydrogenase class 4 mu/sigma chain OS=Homo sapiens GN=ADH7 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.442e-35
Identity = 79/185 (42.70%), Postives = 106/185 (57.30%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 562
            ++ CKAAV WE  +P  I+++EVAPP+  EVRIKI  T +CRTD +  +        P I GH                     V+P+F  +C +C  CR+   N+C    I   RGV LADG +RF+  G+PV+HF+ TSTF+EYTVV    VAKI+  AP +KVC++ CG STG GA +   K
Sbjct:    7 VIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGT-MVSKFPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITG-RGV-LADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGK 188          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADHQ_RABIT (Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctolagus cuniculus GN=ADH2-2 PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.233e-34
Identity = 78/188 (41.49%), Postives = 109/188 (57.98%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLL--RINP-VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 562
            ++ CKAA+AWEAGKPL I++VEVAPP+A EVR++I   S+CR+D Y      +  LLP I GH                     V+P++   C  C+ C+S ++N C       NP +   ++ D  SRF+  G+ + HFLG S FS+YTVV    +AKI+  A L +VC++ CG STG GA +N AK
Sbjct:    7 VIKCKAAIAWEAGKPLSIEEVEVAPPKAHEVRVQIIAASVCRSDTYVINPAFKEGLLPVILGHECAGIVESVGPGVNNFKPGDKVIPLYVPHCRKCKFCQSPLTNFCTKFSEHKNPIIEQELMDDKTSRFTCKGKSIYHFLGISAFSQYTVVKDINLAKIDDDANLKRVCLIGCGFSTGYGAAINDAK 194          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: FADH_PARDE (S-(hydroxymethyl)glutathione dehydrogenase OS=Paracoccus denitrificans GN=flhA PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.611e-34
Identity = 76/184 (41.30%), Postives = 105/184 (57.07%), Query Frame = 2
Query:   20 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFS-INGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 568
            +AAVA EAGKPL + +V +  P+A EV ++IK T +C TD +         L P I GH                    HV+P++T EC  C  C S  +N+C  +R    +G+M  DG SRFS ++G P+ H++G STFS YTV+    VAK+   AP DK+C + CGV+TG+GA +N AK E
Sbjct:    4 RAAVALEAGKPLEVMEVNLEGPKAGEVMVEIKATGICHTDEFTLSGADPEGLFPSILGHEGAGVVVEVGPGVTSVKPGNHVIPLYTPECRQCASCLSGKTNLCTAIRATQGQGLM-PDGTSRFSMLDGTPIFHYMGCSTFSNYTVLPEIAVAKVREDAPFDKICYIGCGVTTGIGAVINTAKVE 186          
BLAST of CN181763 vs. ExPASy Swiss-Prot
Match: ADH1_RANPE (Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.686e-34
Identity = 74/185 (40.00%), Postives = 107/185 (57.84%), Query Frame = 2
Query:    8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLLPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 562
            ++ CKAAV W   +PL I+++EVAPP+  EVR+KI  T +CR+D +           P I GH                     V+P+F  +CG+CR C++  SN+C    I    GV+L D  SRF+  G+ +++F+ TSTF+EYTV+    VAKI+  APL+KVC++ CG STG G+ +N  K
Sbjct:    6 VIKCKAAVCWGPKQPLSIEEIEVAPPKRHEVRVKIVATGICRSDDHVISGALSDMKFPVILGHEAAGVVESVGEGVTKFKPGDKVIPLFVPQCGECRCCKNPESNLCYKNDIGKYDGVLL-DKTSRFTCKGKSIHNFISTSTFTEYTVLDEIAVAKIHEDAPLEKVCLIGCGFSTGYGSAVNTGK 189          
The following BLAST results are available for this feature:
BLAST of CN181763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
FADH1_SCHPO8.540e-3640.32Probable S-(hydroxymethyl)glutathione dehydrogenas... [more]
ADH1B_UROHA8.540e-3642.16Alcohol dehydrogenase 1B OS=Uromastyx hardwickii P... [more]
ADHL1_ARATH1.903e-3544.68Alcohol dehydrogenase-like 1 OS=Arabidopsis thalia... [more]
ADHL7_ARATH2.485e-3541.49Alcohol dehydrogenase-like 7 OS=Arabidopsis thalia... [more]
ADHI_RHOS47.230e-3541.85Alcohol dehydrogenase class-3 OS=Rhodobacter sphae... [more]
ADHP_RABIT9.442e-3540.43Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctol... [more]
ADH7_HUMAN9.442e-3542.70Alcohol dehydrogenase class 4 mu/sigma chain OS=Ho... [more]
ADHQ_RABIT1.233e-3441.49Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctol... [more]
FADH_PARDE1.611e-3441.30S-(hydroxymethyl)glutathione dehydrogenase OS=Para... [more]
ADH1_RANPE4.686e-3440.00Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001H03_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181763 ID=CN181763; Name=CN181763; organism=Citrus sinensis; type=EST; length=646bp
GAGGCTTATTCTTACCTGCAAAGCGGCGGTTGCTTGGGAAGCAGGGAAGC
CGCTGATCATTCAGGATGTGGAGGTTGCTCCTCCACAGGCCATGGAAGTG
AGGATCAAGATCAAATACACCTCTCTTTGCCGCACTGATCTCTATTTCTG
GGAGTCCAAGGGTCAGACACCCTTGCTTCCTCGCATATTTGGGCATGAAG
CAGCAGGGGTTGTGGAAAGTGTTGGGGAAGGTGTTTCAGACCTTGAAGTA
GGGGATCACGTACTCCCGGTATTTACAGGGGAGTGTGGGGATTGTAGACA
CTGCAGGTCGGATGTAAGCAATATGTGTGACCTTTTGAGAATAAACCCAG
TCAGGGGAGTCATGCTTGCTGATGGACAATCTAGGTTTTCCATCAATGGG
GAGCCTGTAAATCACTTCCTTGGAACATCCACCTTTAGCGAGTACACTGT
CGTTCATTCAGGCTGCGTTGCAAAGATCAATCCTCTGGCACCTTTGGACA
AAGTCTGCATTCTCAGTTGTGGCGTCTCAACAGGGCTAGGTGCAACTCTA
AATGTGGCAAAACCTGAAAGGGGTTCGTCAGTCGCTGTCTTTGGCCTCGG
AGCTGTTGGTTTAGCAGCTGCAGAAGGTGCAAGAATTGCTGGAGCA
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