CN181761

Overview
NameCN181761
Unique NameCN181761
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length643
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181761 vs. ExPASy Swiss-Prot
Match: EF2_PICPA (Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.188e-28
Identity = 43/79 (54.43%), Postives = 58/79 (73.42%), Query Frame = -3
Query:  324 PFYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 560
            P + +KAYLPV ESFGF+G LR AT+GQAFPQ VFDHW  M+ +PL+P ++  ++V   RKR+G+KE +    E+ DKL
Sbjct:  764 PLFTVKAYLPVNESFGFTGELRQATAGQAFPQMVFDHWANMNGNPLDPASKVGEIVLAARKRQGMKENVPGYEEYYDKL 842          

HSP 2 Score: 48.9062 bits (115), Expect = 1.188e-28
Identity = 22/29 (75.86%), Postives = 24/29 (82.76%), Query Frame = -2
Query:  556 EQALGGIYSVLNQKRGHVFEEMQRPGTPL 642
            E A+GGIYSVLN+KRG V  E QRPGTPL
Sbjct:  737 ENAIGGIYSVLNKKRGQVISEEQRPGTPL 765          
BLAST of CN181761 vs. ExPASy Swiss-Prot
Match: EF2_NEUCR (Elongation factor 2 OS=Neurospora crassa GN=cot-3 PE=3 SV=3)

HSP 1 Score: 95.5153 bits (236), Expect = 1.546e-28
Identity = 45/80 (56.25%), Postives = 59/80 (73.75%), Query Frame = -3
Query:  324 PFYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMM-SSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 560
            P + IKAYLPV+ESFGF+G LRAATSGQAFPQ VFDHW+ +    PL+  ++  Q+V ++RKRKGLK ++     + DKL
Sbjct:  765 PLFTIKAYLPVMESFGFNGDLRAATSGQAFPQSVFDHWERLPGGSPLDSTSKVGQIVQEMRKRKGLKVEVPGYENYYDKL 844          

HSP 2 Score: 50.0618 bits (118), Expect = 1.546e-28
Identity = 21/29 (72.41%), Postives = 25/29 (86.21%), Query Frame = -2
Query:  556 EQALGGIYSVLNQKRGHVFEEMQRPGTPL 642
            EQA+GG+Y VL ++RGHVF E QRPGTPL
Sbjct:  738 EQAMGGVYGVLTRRRGHVFGEEQRPGTPL 766          
BLAST of CN181761 vs. ExPASy Swiss-Prot
Match: EF2_BOMMO (Translation elongation factor 2 OS=Bombyx mori GN=tef2 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.442e-28
Identity = 44/79 (55.70%), Postives = 58/79 (73.42%), Query Frame = -3
Query:  324 PFYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 560
            P + +KAYLPV ESFGF+  LR+ T GQAFPQCVFDHW ++  DP EP ++   +V + RKRKGLKE +  L+++ DKL
Sbjct:  766 PMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLPDLTQYLDKL 844          

HSP 2 Score: 45.8246 bits (107), Expect = 4.442e-28
Identity = 20/29 (68.97%), Postives = 24/29 (82.76%), Query Frame = -2
Query:  556 EQALGGIYSVLNQKRGHVFEEMQRPGTPL 642
            E A+GGIY VLN++RGHVFEE Q  GTP+
Sbjct:  739 EVAVGGIYGVLNRRRGHVFEESQVAGTPM 767          
BLAST of CN181761 vs. ExPASy Swiss-Prot
Match: EF2_CRYPV (Elongation factor 2 OS=Cryptosporidium parvum PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.663e-27
Identity = 45/79 (56.96%), Postives = 60/79 (75.95%), Query Frame = -3
Query:  324 PFYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 560
            P   IKAYLPV +SF F+  LRAATSG+AFPQCVFDHW++++ DPLE G++  +LV  IR+RK +KE++  L  + DKL
Sbjct:  754 PQVEIKAYLPVADSFKFTTVLRAATSGKAFPQCVFDHWELINGDPLEKGSKTEELVKAIRRRKNIKEEIPALDNYLDKL 832          

HSP 2 Score: 41.9726 bits (97), Expect = 3.663e-27
Identity = 16/31 (51.61%), Postives = 24/31 (77.42%), Query Frame = -2
Query:  550 EQALGGIYSVLNQKRGHVFEEMQRPGTPLLQ 642
            ++ +GGIY+ LNQ+RGHVF E  + GTP ++
Sbjct:  727 QEVVGGIYATLNQRRGHVFHEEPKSGTPQVE 757          
BLAST of CN181761 vs. ExPASy Swiss-Prot
Match: EF2_DEBHA (Elongation factor 2 OS=Debaryomyces hansenii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.369e-26
Identity = 39/79 (49.37%), Postives = 55/79 (69.62%), Query Frame = -3
Query:  324 PFYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 560
            P + +KAYLPV ESFGFSG LR +T GQAFPQ +FDHW  ++ DP +P ++   +V + R+R+G+K  +    E+ DKL
Sbjct:  764 PLFTVKAYLPVNESFGFSGELRQSTGGQAFPQLIFDHWANLNGDPTDPTSKVGTIVKEKRERQGMKPDVPGYEEYYDKL 842          

HSP 2 Score: 48.9062 bits (115), Expect = 1.369e-26
Identity = 22/29 (75.86%), Postives = 24/29 (82.76%), Query Frame = -2
Query:  556 EQALGGIYSVLNQKRGHVFEEMQRPGTPL 642
            E A+GGIYSVLN+KRG V  E QRPGTPL
Sbjct:  737 ENAIGGIYSVLNKKRGQVISEEQRPGTPL 765          
BLAST of CN181761 vs. ExPASy Swiss-Prot
Match: EF2_CANAL (Elongation factor 2 OS=Candida albicans GN=EFT2 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.928e-26
Identity = 40/79 (50.63%), Postives = 54/79 (68.35%), Query Frame = -3
Query:  324 PFYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 560
            P + +KAYLPV ESFGF+G LR AT GQAFPQ +FDHW +MS D  +  ++   +V + R R GLK ++   +E+ DKL
Sbjct:  764 PLFTVKAYLPVNESFGFTGELRQATGGQAFPQLIFDHWQVMSGDVTDENSKPGAIVKEKRVRAGLKPEVPEYTEYYDKL 842          

HSP 2 Score: 48.9062 bits (115), Expect = 3.928e-26
Identity = 22/29 (75.86%), Postives = 24/29 (82.76%), Query Frame = -2
Query:  556 EQALGGIYSVLNQKRGHVFEEMQRPGTPL 642
            E A+GGIYSVLN+KRG V  E QRPGTPL
Sbjct:  737 ENAIGGIYSVLNKKRGQVISEEQRPGTPL 765          
BLAST of CN181761 vs. ExPASy Swiss-Prot
Match: EF2_PICGU (Elongation factor 2 OS=Pichia guilliermondii GN=EFT2 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.660e-26
Identity = 41/79 (51.90%), Postives = 54/79 (68.35%), Query Frame = -3
Query:  324 PFYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 560
            P + +KAYLPV ESFGFSG LR AT GQAFPQ VFDHW ++S D  +P ++   +    R+R+GLK ++    E+ DKL
Sbjct:  764 PLFTVKAYLPVNESFGFSGDLRQATGGQAFPQLVFDHWAVLSGDVTDPTSKPGIIAKAKRERQGLKPEVPGYEEYYDKL 842          

HSP 2 Score: 48.521 bits (114), Expect = 8.660e-26
Identity = 22/29 (75.86%), Postives = 24/29 (82.76%), Query Frame = -2
Query:  556 EQALGGIYSVLNQKRGHVFEEMQRPGTPL 642
            E A+GGIYSVLN+KRG V  E QRPGTPL
Sbjct:  737 ENAIGGIYSVLNKKRGQVVSEEQRPGTPL 765          
BLAST of CN181761 vs. ExPASy Swiss-Prot
Match: EF2_BLAHO (Elongation factor 2 OS=Blastocystis hominis PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.291e-23
Identity = 43/80 (53.75%), Postives = 53/80 (66.25%), Query Frame = -3
Query:  324 PFYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMS-SDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 560
            P  NIK+YLPV ESFGF+  LR AT+GQAFPQCVF HW   +  DPL  GT+  ++V  IR RKGL  ++     + DKL
Sbjct:  788 PMMNIKSYLPVAESFGFTQDLRGATAGQAFPQCVFSHWQAYNGGDPLTEGTKTNEMVKSIRNRKGLAPEVPTPERYLDKL 867          

HSP 2 Score: 40.817 bits (94), Expect = 1.291e-23
Identity = 16/26 (61.54%), Postives = 21/26 (80.77%), Query Frame = -2
Query:  553 GGIYSVLNQKRGHVFEEMQRPGTPLL 630
            GGIY VL ++RGHVFEE+   GTP++
Sbjct:  765 GGIYGVLTRRRGHVFEEIDEVGTPMM 790          
BLAST of CN181761 vs. ExPASy Swiss-Prot
Match: EF2_ENTHI (Elongation factor 2 OS=Entamoeba histolytica GN=EF-2 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.695e-20
Identity = 51/101 (50.50%), Postives = 67/101 (66.34%), Query Frame = -3
Query:  324 VFTVFSIRNVVTCSRKCRDLVPPFYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 626
            ++TV S R     S + R   P F N++AYLPV ESFGF+  LR+ TSGQAFPQCVFDHW +++ D  +  ++   +VA IRKRKGL E +  L +F DKL
Sbjct:  741 IYTVMSRRRGKIISEEQRPGTPLF-NVRAYLPVCESFGFTADLRSHTSGQAFPQCVFDHWQLLNGDVTDATSKVGSIVAAIRKRKGLPEGVPGLDKFYDKL 840          
BLAST of CN181761 vs. ExPASy Swiss-Prot
Match: EF2_DICDI (Elongation factor 2 OS=Dictyostelium discoideum GN=efbA PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 2.801e-15
Identity = 41/101 (40.59%), Postives = 64/101 (63.37%), Query Frame = -3
Query:  324 VFTVFSIRNVVTCSRKCRDLVPPFYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 626
            +++V + R  +    + R +  P +++KA+LPV+ESFGF+  LR+ T+GQAFPQCVFDHW   S   +    +A ++    RKRKGL  ++  L +F +KL
Sbjct:  742 IYSVLNRRRGIVIGEE-RRIGSPLFSVKAHLPVLESFGFTADLRSHTAGQAFPQCVFDHW--ASIGVVNKDKKATEVALATRKRKGLAPEIPDLDKFHEKL 839          
The following BLAST results are available for this feature:
BLAST of CN181761 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
EF2_PICPA1.188e-2854.43Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=... [more]
EF2_NEUCR1.546e-2856.25Elongation factor 2 OS=Neurospora crassa GN=cot-3 ... [more]
EF2_BOMMO4.442e-2855.70Translation elongation factor 2 OS=Bombyx mori GN=... [more]
EF2_CRYPV3.663e-2756.96Elongation factor 2 OS=Cryptosporidium parvum PE=3... [more]
EF2_DEBHA1.369e-2649.37Elongation factor 2 OS=Debaryomyces hansenii GN=EF... [more]
EF2_CANAL3.928e-2650.63Elongation factor 2 OS=Candida albicans GN=EFT2 PE... [more]
EF2_PICGU8.660e-2651.90Elongation factor 2 OS=Pichia guilliermondii GN=EF... [more]
EF2_BLAHO1.291e-2353.75Elongation factor 2 OS=Blastocystis hominis PE=2 S... [more]
EF2_ENTHI1.695e-2050.50Elongation factor 2 OS=Entamoeba histolytica GN=EF... [more]
EF2_DICDI2.801e-1540.59Elongation factor 2 OS=Dictyostelium discoideum GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001H02_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181761 ID=CN181761; Name=CN181761; organism=Citrus sinensis; type=EST; length=643bp
GGCCAGAATTAGTTTAAACACATGACAGAACATCAAACCTTAAAAGCTGT
GAATTGTAAAATTTAAAACCTAGATGACAGAGACAGGGTTACTAAACCCA
ATCAACAGTAATATTACTTTACTAAACACAATGAGGATATTGAAAAACTT
TGAAACAAAAATAAGCATCAGCAAAAAATATTGCTGCGCAATCTCACCCT
TGATGTCAAGATGAAATGTTTACAGCTCGTCCTCTACTCGGATAGCGGTG
TCATTTGCTCCCTCTTCCTGATATCAGCAACAAGCTGCGCAATCTCACCC
TTGATGTCAAGACGAAATGTTTACAGCTTGTCCTCAAACTCAGATAGTGG
TGTCATTTGCTCCTTCAAGCCCTTCCTCTTCCTGATATCAGCAACAAGCT
GTGCAGCCTGTGTACCAGGCTCCAGTGGATCGGATGACATCATGTCCCAG
TGATCAAACACACATTGTGGGAAGGCCTGTCCTGACGTTGCAGCCCTCAA
AGTGCCTGAGAATCCAAAGGACTCGATGACGGGAAGGTAAGCCTTGATGT
TGTAAAAGGGGGGTACCAGGTCTCTGCATTTCCTCGAACACGTGACCACG
TTTCTGATTGAGAACACTGTAAATACCACCCAAGGCCTGCTCG
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